Streptomyces californicus: I6J39_24065
Help
Entry
I6J39_24065 CDS
T07611
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scal
Streptomyces californicus
Pathway
scal03420
Nucleotide excision repair
scal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J39_24065
03430 Mismatch repair
I6J39_24065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_24065
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J39_24065
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J39_24065
MMR (mismatch excision repair)
Other MMR factors
I6J39_24065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
C1_1
Zn_ribbon_TiaS
APOBEC1
Motif
Other DBs
NCBI-ProteinID:
QRV30025
LinkDB
All DBs
Position
5502402..5504618
Genome browser
AA seq
738 aa
AA seq
DB search
MTAATHSTLFPQVPDTPDAVLDGLDPEQREVALALHGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPATVLAVTFTNRAAGEMRGRLRQLGATGVQARTFHSAALRQLQYFWPKAVGGE
LPRLLERKVQLVSEAAARCQIRLDRTELRDATSEIEWAKVTQTVPADYAAAVVKAQRDAP
RDPAELAQIYSTYEQLKRDRSVIDFEDVLLLMVGILQDRADIAEHVRGQYQHFVVDEYQD
VSPLQQRLLDLWVGDRDDLCVVGDASQTIYSFTGATPDHLLNFRTRHPGATVVKLVRDYR
STPQVVHLANGLLSQARGKAADHRLELVSQRDKGPEPVYTEYGDEPTEAESTARRIRDLI
AAGVPAGEIAVLYRVNSQSEVYEQALADAGVPYQLRGAERFFERAEVREAGTALRGAARA
GGNDSLLDGADDLAAQVRAVLSTKGWTTRPPAGSGAVRDRWESLAALVRLAEDFEAARPG
ATLTDLVRELDERAAAQHAPTVQGVTLASLHAAKGLEWDAVFLVGLTEGMMPIAYAKTDE
QVEEERRLLYVGITRARVHLSLSWALSRSPGGRASRRATRFLNGLRPGSGTVGARGGTGG
GGGIDRGTARTAANRAPAVERKPRSPVRCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYE
RLHDWRAAQAALLGQPDFCVFTEKTLMAIAEAVPSTEGELVVIAGVGNRKLNRFGTDVLA
ICAGETVNDEAPQDTDET
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttcccgcaggttcccgacaccccggacgccgtg
ctcgacgggctcgaccccgagcagcgcgaggtggcgctcgccctgcacggaccggtgtgc
gtgctggccggagccggtacgggcaagacccgcgcgatcacccatcgcatcgcctacggg
gtgcgcgccggcatcctccagccggccaccgtgctcgccgtcaccttcaccaaccgggcc
gccggagagatgcgcggccggctccgccagctcggcgcgaccggcgtccaggcgcggacc
ttccactccgccgcgctccggcagctccagtatttctggccgaaagcagtcggtggtgag
ctgccccggctgctggagcggaaggtgcagctggtctccgaggcggccgcccgctgccag
atccggctcgaccgcaccgagctgcgcgacgcgacgagcgagatcgagtgggccaaggtc
acccagaccgtccccgccgactacgcggcggccgtggtcaaggcccagcgggacgccccc
cgcgacccggcggagctcgcccagatctactccacgtacgagcagctcaagcgcgaccgc
tcggtgatcgacttcgaggacgtgctgctgctgatggtcggcatcctccaggaccgggcg
gacatcgcggagcacgtgcgcggccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagcccgctccagcagcggctgctcgacctctgggtcggcgaccgggacgacctctgc
gtggtgggcgacgccagccagacgatctactccttcaccggggccacccccgaccacctg
ctgaacttccgcacccgccaccccggggcgaccgtggtcaagctggtccgcgactaccgc
tccaccccccaggtcgtccacctcgccaacggcctgctgagccaggcccgcggcaaggcc
gccgaccaccgcctggagctggtctcgcagcgcgacaagggccccgagccggtctacacg
gagtacggggacgagcccaccgaggccgagtccaccgcccgccgcatccgcgacctcatc
gccgcgggcgtcccggccggcgagatcgccgtgctctaccgcgtcaactcccagtccgag
gtctacgagcaggccctcgccgacgccggggtcccctaccagctgcgcggcgccgagcgg
ttcttcgagcgggcggaggtccgcgaggcgggcaccgccctgcgcggagcggcccgcgcc
gggggcaacgactccctgctcgacggggcggacgacctggccgcccaggtgcgggcggtg
ctctccaccaagggctggaccacgcgtccccccgccgggtccggcgccgtgcgcgaccgc
tgggagtcgctggccgcactggtccggctcgcggaggacttcgaggcggccaggccgggg
gcgacgctcaccgacctggtccgcgagctggacgaacgggcggccgcccagcacgcgccc
acggtccagggcgtcacgctggcctccctgcacgcggcgaagggcctggagtgggacgcc
gtcttcctggtcggtctcaccgagggcatgatgccgatcgcctacgccaagaccgacgaa
caggtcgaggaggagcgccgcctgctgtacgtcggcatcacccgcgcccgcgtgcacctc
tcgctctcctgggcgctgtcccggtccccgggcggccgggcgagccgtcgggccacccgc
ttcctgaacgggctgcggccgggctcggggaccgtcggcgcgcgcggcgggaccggcggc
ggcggcggtatcgaccggggcaccgccaggaccgcggcgaaccgggccccggcggtcgag
cgcaagcccaggagccccgtgcggtgccgggtctgcgggcggacgctgaccgacgcgggc
gagatgaagctgatgcgctgcgaggactgcccctcggacatggacgagggactgtacgag
cggctgcacgactggcgcgccgcccaggcggccctgctcggccagcccgacttctgcgtc
ttcaccgagaagacgctcatggcgatcgcggaggccgtcccgtccacggagggcgagctc
gtcgtcatcgccggcgtcggcaaccggaagctgaaccgcttcggcaccgatgttctggcc
atctgcgcaggtgagaccgtcaatgacgaggccccgcaggacaccgacgagacctga
DBGET
integrated database retrieval system
