Streptomyces californicus: I6J39_24340
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Entry
I6J39_24340 CDS
T07611
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_24340
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_24340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
HTH_10
HTH_AsnC-type
HTH_3
DUF7343
MarR
Sigma70_ECF
HTH_Crp_2
NirdL-like_HTH
IF2_N
GerE
HTH_AraC
DUF4423
UBA_2
Motif
Other DBs
NCBI-ProteinID:
QRV30070
LinkDB
All DBs
Position
complement(5561010..5561939)
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AA seq
309 aa
AA seq
DB search
MRDETFRSGAVRPTGIPEQQARPHPEDGAEGPERPDAAVEEQAQAEWAGQMSEHGHHDPH
DRTGARALFYELRALPDGSAEKAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATI
GLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAEL
SQQHGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGSEDE
ALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQ
LRERLLVEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgagactttccggtccggggcggtgcgcccgacgggcatcccggagcagcag
gcccggccgcatccggaggacggagcggaggggcccgagcgccccgacgccgcggtggag
gagcaggcgcaggcagagtgggcgggccagatgagcgagcacgggcaccacgatccgcac
gaccgcaccggggcccgggccctgttctacgaactgcgggcgctgcccgacggttcggcg
gagaaggccgagctgcggaaccggctggtgcgcatgcacctgcccctggtggagcatctg
gcccgccgtttccgcaaccggggcgagccgctggacgatctgacccaggtcgccacgatc
gggctgatcaagtccgtggaccggttcgacccggaccggggcgtggagttctccacgtac
gccacccccacggtggtcggcgagatcaagcgccacttccgggacaaggggtgggcggtg
cgggtgccgcgccgtctgcaggagctgcggctgtcgctgaccacggccaccgcggagctc
tcgcagcagcacgggcgttcgccgacggtgcacgagctggccgagcggctgggcatctcc
gaggaggaggtgctggagggcctggagtccgccaacgcgtacagcacgctctcgctggac
gtgccggacacggacgacgagtcgccggcggtcgcggacacgctgggctcggaggacgag
gcgctggagggggtcgagtaccgggagtccctcaagccgctcctggaggacctgccgccg
cgcgagaagcggatcctgctgctgcggttcttcgggaacatgacgcagtcgcagatcgcg
caggaggtgggcatctcgcagatgcacgtctcccggctgctggcccgcacgctggcgcag
ttgcgggagcggctgctcgtcgaggagtag
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integrated database retrieval system
