Streptomyces californicus: I6J39_25515
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Entry
I6J39_25515 CDS
T07611
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scal
Streptomyces californicus
Pathway
scal00260
Glycine, serine and threonine metabolism
scal00460
Cyanoamino acid metabolism
scal00630
Glyoxylate and dicarboxylate metabolism
scal00670
One carbon pool by folate
scal00680
Methane metabolism
scal01100
Metabolic pathways
scal01110
Biosynthesis of secondary metabolites
scal01120
Microbial metabolism in diverse environments
scal01200
Carbon metabolism
scal01230
Biosynthesis of amino acids
scal01240
Biosynthesis of cofactors
scal04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I6J39_25515
09102 Energy metabolism
00680 Methane metabolism
I6J39_25515
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I6J39_25515
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I6J39_25515
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I6J39_25515
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I6J39_25515
Enzymes [BR:
scal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I6J39_25515
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
Lactamase_B_3
DegT_DnrJ_EryC1
SelA
Rab3-GAP_cat_C
Motif
Other DBs
NCBI-ProteinID:
QRV30279
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Position
complement(5838493..5839752)
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AA seq
419 aa
AA seq
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MSLLNSSLHELDPDVAAAVDAELHRQQSTLEMIASENFAPVAVMEAQGSVLTNKYAEGYP
GRRYYGGCEHVDVVEQIAIDRIKALFGAEAANVQPHSGAQANAAAMFALLKPGDTIMGLN
LAHGGHLTHGMKINFSGKLYNVVPYHVDETGVVDMEEVERLAKESQPKLIVAGWSAYPRQ
LDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPNPVPHAHVVTTTTHKTLGGPRGGVIL
STQELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAAGEEFKERQQRTLDGARILAERLV
QPDVTEVGVSVLSGGTDVHLVLVDLRNSELDGQQAEDRLHELGITVNRNAIPNDPRPPMV
TSGLRIGTPALATRGFGAEEFTEVAEIIASALKPSYDADDLKARVAALAEKFPLYPGLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttctgaactcctccctccacgagctggacccggacgtcgccgccgccgtcgac
gccgagctccaccgtcagcagtccaccctcgagatgatcgcctcggagaacttcgctccg
gtcgccgtcatggaggcgcagggctccgtcctcaccaacaagtacgccgagggctacccg
ggtcgccggtactacggcggttgtgagcacgtcgacgtcgtcgagcagatcgcgatcgac
cggatcaaggcgctgttcggcgccgaggccgcgaacgtgcagccgcactcgggcgcccag
gcgaacgccgccgcgatgttcgcgctgctgaagccgggcgacacgatcatgggcctgaac
ctggcccacggcggtcacctgacccacggcatgaagatcaacttctccggcaagctctac
aacgtggtcccgtaccacgtcgacgagaccggtgtcgtggacatggaggaggtcgagcgc
ctcgccaaggagtcccagccgaagctgatcgtggccggctggtccgcctacccgcgccag
ctcgacttcgccgccttccgccgtatcgcggacgaggtcggcgcgtacctgatggtcgac
atggcgcacttcgcgggcctggtcgcggccgggctgcaccccaacccggtgccgcacgcc
cacgtcgtcaccaccaccacgcacaagaccctcggcggtccgcgcggtggcgtgatcctc
tccacccaggagctggccaagaagatcaactcggcggtcttcccgggccagcagggcggc
ccgctggagcacgtgatcgcggcgaaggcggtctcgttcaaggtcgcggcgggcgaggag
ttcaaggagcgccagcagcgcaccctggacggcgcgcgcatcctggccgagcgcctggtc
cagccggacgtcaccgaggtgggcgtctccgtcctctccggcggcaccgacgtgcacctg
gtcctggtcgacctgcgcaactccgagctggacggccagcaggccgaggaccggctccac
gagctgggcatcacggtcaaccggaacgccatcccgaacgacccgcgtcccccgatggtc
acctcgggcctgcggatcggcaccccggcgctggccacccgcggcttcggcgccgaggag
ttcacggaggtcgcggagatcatcgcgtccgccctcaagccgtcgtacgacgcggacgac
ctcaaggcccgcgtggccgcgctggccgagaagttcccgctgtaccccggcctgaagtag
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