KEGG   Streptomyces californicus: I6J39_26110
Entry
I6J39_26110       CDS       T07611                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
scal  Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:scal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scal03032]
    I6J39_26110
   03036 Chromosome and associated proteins [BR:scal03036]
    I6J39_26110
   03400 DNA repair and recombination proteins [BR:scal03400]
    I6J39_26110
DNA replication proteins [BR:scal03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    I6J39_26110
Chromosome and associated proteins [BR:scal03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    I6J39_26110
DNA repair and recombination proteins [BR:scal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      I6J39_26110
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: QRV30382
LinkDB
Position
5978946..5979605
AA seq 219 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSAARTTV
KAAAAKKSAAKKATAKKTTAKKATPAKTAAAKKATAKKTTATAKKTSAAAKKATPAKKTA
TKAVAGKTAPAKKATAKKAPAKKTTARKTTAKKATARKK
NT seq 660 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcggacgcggtcgacgcggtgctcgacgcgatcgtgcgtgccgtggtcgccggggaccgt
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgcgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctccccaagaacgacgtggcc
gtcaagaaggcccccaagggcagcctctcgggcgggtcttccgccgcccgtacgacggtg
aaggccgccgccgccaagaagtcggccgccaagaaggccacggcgaagaagaccaccgcc
aagaaggcgaccccggcgaagaccgcggccgccaagaaggccaccgccaagaagacgacc
gcgacggcgaagaagacgtccgcggccgcgaagaaggcgaccccggccaagaagaccgcc
acgaaggccgtcgccggcaagaccgcgcccgccaagaaggccacggcgaagaaggcgccc
gcgaagaagaccaccgcgcgcaagaccacggccaagaaggccaccgcacgcaagaagtga

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