Streptomyces californicus: I6J39_26110
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Entry
I6J39_26110 CDS
T07611
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_26110
03036 Chromosome and associated proteins [BR:
scal03036
]
I6J39_26110
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_26110
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6J39_26110
Chromosome and associated proteins [BR:
scal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I6J39_26110
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I6J39_26110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
QRV30382
LinkDB
All DBs
Position
5978946..5979605
Genome browser
AA seq
219 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSAARTTV
KAAAAKKSAAKKATAKKTTAKKATPAKTAAAKKATAKKTTATAKKTSAAAKKATPAKKTA
TKAVAGKTAPAKKATAKKAPAKKTTARKTTAKKATARKK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcggacgcggtcgacgcggtgctcgacgcgatcgtgcgtgccgtggtcgccggggaccgt
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgcgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctccccaagaacgacgtggcc
gtcaagaaggcccccaagggcagcctctcgggcgggtcttccgccgcccgtacgacggtg
aaggccgccgccgccaagaagtcggccgccaagaaggccacggcgaagaagaccaccgcc
aagaaggcgaccccggcgaagaccgcggccgccaagaaggccaccgccaagaagacgacc
gcgacggcgaagaagacgtccgcggccgcgaagaaggcgaccccggccaagaagaccgcc
acgaaggccgtcgccggcaagaccgcgcccgccaagaaggccacggcgaagaaggcgccc
gcgaagaagaccaccgcgcgcaagaccacggccaagaaggccaccgcacgcaagaagtga
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