Streptomyces californicus: I6J39_27065
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Entry
I6J39_27065 CDS
T07611
Name
(GenBank) HAMP domain-containing protein
Organism
scal
Streptomyces californicus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG17_like
DUF4795
RNase_Y_N
Nup49_C
GAF_3
Med21
ATG14
Motif
Other DBs
NCBI-ProteinID:
QRV30550
LinkDB
All DBs
Position
6182586..6188036
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AA seq
1816 aa
AA seq
DB search
MKKQRNGTVEVDAAALNRVLGALVAMRDGNFRRRLTVSGDGVLSEIAAVFNEVADRNLHL
TGELARVRRVVGREGKLTERLETGACEGSWAAAIDASNELVDDLARPVSEVGRVLSAVAD
GDLEQRMELRSHTQDETVRPLRGEFLKVARTVNNLVDQLSVFTEQVTRVAVEVGTEGKLG
GQAQVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTTAVAKGDLSRKVTVHVAGEMLQL
KNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQATVPGVAGVWKDLTDSVNTMAGNLTS
QVRGIAEVTTAVANGDLTQKVTVSARGEVAQLAETINQMTETLRTFADEVTRVASEVGGE
GLLGGQAQVPGAAGTWKDLTDSVNTVFRNLTTQVRDIAQVTTAVASGDMTQKVTVDVAGE
MLELKNTVNTMVDQLQSFGSEVTRVAREVGVEGRLGGQAEVPGAAGTWKDLTDSVNTAFR
NLTGQVRDIAQVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVAQLSSFADQVTRMARD
VGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQVTTAVARGDLSQKIDVD
ARGEILELKNTINTMVDQLSAFADQVTRVAREVGTDGRLGGQAQVPGVAGVWRDLTDSVN
GMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNTLNTMVDQLSNFAEQVTR
VAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNLTLQVRNIAEVTTAVAKGDLSKK
ITVDAKGEILELVTTVNTMVDQLLNFADEVSRVAREVGTEGILGGQARVRGATGIWKDLS
ENVNLMANNLTSQVRNISRVSSAVANGDLTKKVTVEARGEVAELADTVNTMVTTLSSFAD
EVTRVAREVGTEGELGGQARVPGVAGTWKDLTESVNSMASNLTGQVRQIATVTTAIAKGD
LTKKIDIDARGEIQELKNTINTMVDQLSSFAEQVTRVAREVGTEGQLGGQARVRDVDGTW
RDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKIDVDAAGEIQVLQDNINTMIANLR
DTTLANKEQDWLKGNLARISGLMQGRRDLDDVASLIMSELTPVVSAQHGAFFLAMAPGDS
DEVGPDNGEDGSYELRMRGSYGYSAGSMPTSFRPGETLIGTAAEEKRTIQVDNVPPGYLK
ISSGLGEAPPAHVIVLPVLFEGKVLGVIELASFQPFTHIQRDFLNQLAEMIATSVNTISV
NTKTEKLLEQSQELTEQLRDRSQELENRQKALQASNAELEEKAELLAQQNRDIEVKNTEI
EEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNAEGNLSPKQVE
FAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLD
FSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVIRPAGADVPNAIREHLL
EAGSLRDPDAGLIAFSVTDTGIGIASSKMLVIFEAFKQADGTTSRKYGGTGLGLSISREI
ARLLGGEIHAASEPGRGSTFTLYLPLHRAELPPQGYPSAGSGSAEVLGGADGPGQAQPPQ
GQQAPLGDPANSAGVFRRRRKALGEAAARPALPAGRTAPDSAPQQEEWVQGGPDRAQDQG
AEEQAPRRTFRFRGEKVLIVDDDIRNVFALTSVLEQHGLAVLYAENGREGIEVLEQHDDV
TVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIVALTAKAMKGDREKAIECGASDYVTKPV
DPDHLLAVMEQWMHGE
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagcagcgcaatggcaccgtcgaagtggacgcggcggctctgaacagagtgctc
ggggccctggtggcgatgcgcgacggcaatttccgccggcggctcaccgtctccggcgac
ggagtgctgtcggagatcgcggcggtcttcaacgaggtcgcggaccgcaatctccacctc
acgggtgagctggcacgcgtacgccgggtggtcgggcgcgaggggaagctcaccgagcgg
ctggagacgggcgcctgcgagggctcttgggccgccgcgatcgacgcctccaacgagctc
gtcgacgatctcgcgcggcccgtctccgaggtgggccgggtcctgtcggcggtcgccgac
ggtgacctggagcagcggatggagctgcgttcgcacacgcaggacgagacggtgcgcccg
ctgcgcggggagttcctgaaggtcgcccgtacggtcaacaacctcgtcgaccagttgtcg
gtcttcaccgaacaggtcacccgggtcgcggtcgaggtgggcaccgagggcaagctcggc
ggccaggcgcaggtgcgcgggatgtcggggtcctggaaggacctcacggactccgtcaac
accatggcgtaccggctcaccgcacaggtgagggacatcgcgctggtgaccacggcggtc
gccaagggcgatctgtcccgcaaggtcaccgtccacgtggccggcgagatgctccagctc
aagaacaccgtgaacacgatggtggaccagctgtcgtcgttctcgtccgaggtgacgcgc
gtcgcccgcgaggtgggtacggagggcgagctcggcggtcaggcgaccgtgccgggcgtc
gccggcgtgtggaaggacctcaccgactccgtcaacacgatggcgggcaacctcacctcc
caggtgcgcggcatcgcggaggtgacgacggcggtcgccaacggcgacctgacgcagaag
gtcacggtgagcgcgcgcggcgaggtcgcccagctcgccgagacgatcaaccagatgacc
gagacgctgcgcaccttcgcggacgaggtgacccgcgtggcgagcgaggtcggcggcgaa
gggctgctcgggggccaggcgcaggttccgggggccgcggggacgtggaaggacctcacc
gattcggtgaacacggtcttccggaacctgaccacgcaggtgcgcgacatcgcccaggtg
accacggcggtggccagcggcgacatgacgcagaaggtcacggtcgacgtggccggggag
atgctggagctgaagaacaccgtcaacacgatggtggaccagctccagtcgttcggttcc
gaggtgacccgggtcgcccgggaggtcggcgtcgagggccggctcggcggccaggccgag
gtgccgggcgcggcggggacgtggaaggacctcaccgactcggtgaacaccgcgttccgc
aacctgaccggacaggtccgggacatcgcccaggtgaccacggccgtcgccaacggagac
ctctcccagaaggtcaccgtggacgtggccggggagatgctggagctgaagaacaccgtc
aacacgatggtggcgcagctgtccagcttcgccgaccaggtgacgcggatggcccgggac
gtgggcaccgagggccgtctcggcgggcaggcgcgcgtggacggcgtatcgggtacgtgg
aaggagctgacggactccgtcaacttcatggccgggaacctcacctcgcaggtgaggcag
atcgctcaggtgacgacggcggtggcgcggggcgacctgtcgcagaagatcgacgtggac
gcccggggcgagatcctggagctcaagaacaccatcaacaccatggtcgaccagctctcg
gccttcgccgaccaggtcaccagggtggcccgcgaggtgggtacggacgggcggctcggc
ggtcaggcgcaggtgcccggcgtggccggagtgtggcgtgatctcaccgattcggtgaac
ggcatggcaggcaacctgaccgctcaggtccgcaacatcgcgcaggtcgccacggcggtg
gcgcgcggtgacctgtcgcagaagatcgacgtggacgcccggggcgagatcctggagctc
aagaacacgctcaacacgatggtggaccagctgtccaacttcgcggagcaggtgacgcgg
gtcgcccgtgaggtgggtacggagggcatcctcggcggtcaggccgaggtccagggcgtc
tccggtacgtggaaggacctgacccagtccgtcaacggcatggcgaacaacctgacgctc
caggtccgcaacatcgccgaggtcaccaccgcggtcgccaagggcgacctctccaagaag
atcaccgtcgacgccaagggcgagatcctcgaactggtcacgaccgtcaacacgatggtc
gaccagctgctgaacttcgccgacgaggtgtccagggtggcccgcgaggtgggcaccgag
gggatcctcggcggtcaggcgcgggtgcgcggggcgaccggcatctggaaggacctcagc
gagaacgtcaacctgatggccaacaacctgaccagccaggtgcgcaacatctcccgggtc
tcctccgcggtcgccaacggcgatctgacgaagaaggtcaccgtggaggcacggggcgag
gtcgcggagctggccgacaccgtcaacacgatggtgacgacgctctcctcgttcgccgac
gaggtgacgcgggtggcccgcgaggtgggcaccgagggcgagctgggcggtcaggcccgg
gtgccgggggtcgccggcacgtggaaggacctcacggagtccgtgaactcgatggcctcc
aacctgaccggtcaggtgcggcagatcgccacggtcaccaccgccatcgccaagggcgac
ctgaccaagaagatcgacatcgacgcgcgcggtgagatccaggagctgaagaacaccatc
aacacgatggtcgaccagttgtcctcgttcgccgagcaggtgacgcgggtcgcccgcgag
gtgggtaccgaggggcagctgggcggccaggcgcgcgtgcgggacgtggacggtacctgg
cgcgacctgaccgagtcggtgaacgagatggccgggaacctgacccgtcaggtacgggcc
atcgcggcggtcgccacggcggtgacgcgcggcgatctgaacctcaagatcgacgtggac
gcggctggtgagatccaggtcctccaggacaacatcaacacgatgatcgcgaacctgcgc
gacactacgctcgccaacaaggagcaggactggctgaagggcaacctcgcccggatctcc
ggactgatgcagggccgccgcgatctggacgacgtggcctcgctgatcatgagcgagctg
acgccggtggtctcggctcagcacggcgcgttcttcctggcgatggcgccgggcgattcg
gatgaggtcggtcccgacaacggcgaggacggctcgtacgagctgcggatgcgggggagt
tacggctactccgcgggctcgatgccgacctccttccggcccggggagacgctcatcggg
acggcggccgaggagaagcggacgatccaggtggacaacgtgccgccggggtacctgaag
atctcgtccgggctcggggaggcccctccggcgcatgtgatcgtgctgccggtcctcttc
gagggcaaggtcctcggcgtgatcgagctggcctccttccagccgttcacgcacatccag
cgggacttcctcaaccagctcgccgagatgatcgccaccagcgtcaacacgatcagcgtc
aacaccaagacggagaagctgctggagcagtcgcaggagctgaccgagcaactgcgcgac
cgctcgcaggagttggagaaccgccagaaggcactccaggcgtccaacgccgaactggag
gagaaggccgagctgctggcccagcagaaccgcgacatcgaggtgaagaacaccgagatc
gaggaggcgcgccaggtgctggaggagcgcgccgagcagctcgcggtctcgatgcgctac
aagtccgagttcctggcgaacatgtcgcacgagctgcgcacgccgctcaactcgctgctg
atcctcgccaagttgctggccgacaacgccgagggcaacctctcgccgaagcaggtggag
ttcgccgagacgatccacggcgccggctccgacctgctccagctgatcaacgacatcctc
gacctctccaaggtcgaggcgggcaagatggacgtcagcccgacgcggatcgcgctggtc
cagttggtcgactacgtggaggccaccttccgcccgctcaccgcggagaaggggctcgac
ttctccgtacgggtctcgccggagcttcccgccaccctgcacacggacgagcagcgcctg
ctccaggtgctgcgcaacctgctctccaacgcggtgaagttcaccgacagcggtgcggtc
gagctggtgatccggccggccggagccgacgttcccaacgcgatccgggaacatctgctg
gaggccggttcgctgcgcgacccggacgccggtctgatcgccttctcggtgaccgacacc
ggcatcgggatcgcgtccagcaagatgctggtgatcttcgaggcgttcaagcaggcggac
ggcacgacgagccgcaagtacggaggcaccggtctcggcctctccatcagccgggagatc
gcccggctgctcggcggtgagatccacgcggccagcgaaccgggccggggttcgaccttc
acgctgtacctgccgctgcaccgcgcggaactgccgccccagggctacccgtcggcgggt
tccggttccgccgaggtgctgggtggcgccgacgggccggggcaggcccagccgccgcag
ggccagcaggctccgctcggcgatccggccaactccgcgggagtgttccgtcgtcggcgc
aaggccttgggggaagcggccgccaggcccgccctcccggccggtcgcaccgcgcccgac
agcgcgcctcagcaggaggaatgggtgcagggcggcccggaccgggcgcaggaccagggc
gcggaggagcaggcgccccggcggacgttccgtttccgcggggagaaggtgctcatcgtc
gacgacgacatccgcaacgtcttcgcgctcaccagcgtgctggagcagcacggactggcg
gtgctgtacgccgagaacggccgcgaggggatcgaagtcctggagcagcacgacgacgtg
acggtcgtactgatggacatcatgatgcccgagatggacggttacgcgacgacgaccgcg
atccggcggatgccgcagttcgccggacttccgatcgtggcgctcaccgcgaaggcgatg
aagggcgaccgggagaaggccatcgagtgtggagcttccgactatgtgacgaagccggtc
gatcctgatcatctgctcgcggtgatggagcagtggatgcacggagagtga
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