Streptomyces californicus: I6J39_27440
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Entry
I6J39_27440 CDS
T07611
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scal03032
]
I6J39_27440
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_27440
Enzymes [BR:
scal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I6J39_27440
DNA replication proteins [BR:
scal03032
]
Prokaryotic type
DNA Topoisomerases
I6J39_27440
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6J39_27440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QRV30617
LinkDB
All DBs
Position
complement(6280078..6282531)
Genome browser
AA seq
817 aa
AA seq
DB search
MARRSTKTPPPDDFEEKILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVHRRIVS
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMADATSLMTEAIDEDTVDFQSNYDGQEREPVVLPAAYPNLLVN
GVSGIAVGMATNMPPHNLGEVIAAARHLIKHPGADVETLMRFVPGPDLPTGGRIVGLGGI
KDAYTGGRGTFKIRATVAVENVTARRKGLVVTELPFAVGPEKVISKIKDLVSAKKLQGIA
DVKDLTDRAHGLRLVIEVKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLQVYLDHRFEVVRRRSEFRRTKRRDRLHLVEGLLVALLDIDEVIRIIRDSDNSAQAKER
LMAHFSLSEIQTQYILDTPLRRLTRFDRIELEDERSKLNSEIEALTAILESDAELRKMVS
AELAAVAKKFGTDRRTVLLESAGSQIAAVPLEVADDPCRVLLSSTGLLARTANAEPVEIS
EDARRTKHDVIVSAVAATARGDVGAVTSAGRLLRLSVIDLPQLPDTHAEPNLSGGAQISE
FLTLEAGEELICLTTLEESSPGLAIGTLQGVVKRVVPDYPANKDELEVITLKDGDRIVGA
TELRTGEEDLVFITSDAQLLRYPAASVRPQGRPAGGMAGVKLAAGAEVLSFSAVDPASEA
IVFTVAGSHGTLDDSVLTSKLTPFDQYPRKGRATGGVRCQRFLKGEDVLVFAWAGPAPAR
AAQKNGTPAKLPEPDPRRDGSGTPLLEKVAVIAGPPL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtagcacgaagaccccgcctccggacgacttcgaggagaagatcctcgac
atcgacgtcgtcgacgaaatgcagggttccttcctcgagtacgcgtactcggtgatctac
tccagggccctgcccgacgcccgcgacggcatgaagccggtgcaccggcgcatcgtgtcc
cagatgaacgagatgggcctgcggcccgaccggggctatgtgaagtgcgcccgtgtcgtc
ggcgaggtgatgggcaagctgcacccgcacggcgacgcctcgatctacgacgcgctcgtg
cggatggcgcagcccttctcgatgcggctgcccctggtcgacggtcacggcaacttcggc
tcgctcggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggccgac
gcgacctcgctgatgaccgaggcgatcgacgaggacaccgtcgacttccagtcgaactac
gacggccaggagcgcgagccggtcgtcctcccggccgcctaccccaacctcctggtcaac
ggggtgtccgggatcgccgtgggcatggccaccaacatgccgccgcacaatctgggcgag
gtcatcgccgccgcccggcacctgatcaagcacccgggcgccgacgtcgagacgctgatg
cggttcgtccccggccccgacctgcccaccggcggccgcatcgtggggctcggcgggatc
aaggacgcgtacacggggggccggggcacgttcaagatccgcgccaccgtcgccgtggag
aacgtgacggcccggcgcaagggcctcgtcgtcaccgaactccccttcgccgtcggcccg
gagaaggtgatctccaagatcaaggacctggtctcggcgaagaagctccagggcatcgcc
gacgtcaaggacctgaccgaccgggcgcacgggctgcgtctggtcatcgaggtgaagaac
ggcttcgttccggaagcggtgctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaacgtggcgctggtcgacggccagccgctcaccctgggcctcaaggag
ctgctgcaggtctacctcgaccaccgcttcgaggtggtgcgccggcgcagcgagttccgc
cgcaccaagcgccgcgaccggctgcacctggtcgagggcctcctcgtcgcgctcctcgac
atcgacgaggtcatccggatcatccgggacagcgacaactccgcgcaggcgaaggagcgt
ctgatggcgcacttctcgctgagcgagatccagacgcagtacatcctggacaccccgctg
cgccggctcacccgcttcgaccggatcgagctggaggacgagcggtccaagctgaacagc
gagatcgaggcgctgaccgcgatcctggagtcggacgcggagctgcgcaagatggtctcc
gcggagctggcggccgtggcgaagaagttcggcacggaccgtcgcacggtgctgctggag
tcggccggttcgcagatcgcggccgtgccgctggaggtggcggacgacccgtgccgggtg
ctgctctcctccacgggtctgctggcccgtacggcgaacgctgagccggtcgagatctcc
gaggacgcccggcgcaccaagcacgacgtgatcgtttcggcggtggcggcgacggcgcgc
ggcgacgtcggtgcggtcacctcggcgggccggctcctgcggctctcggtgatcgacctg
ccgcagctcccggatacgcacgccgagccgaatctctccggcggcgcgcagatctccgag
ttcctgacgctggaggcgggcgaggagctgatctgcctcaccacgctggaggagtcctcg
ccggggctggcgatcggcaccctccagggcgtggtgaagcgcgtcgtgccggactacccg
gccaacaaggacgagttggaggtcatcaccctcaaggacggtgaccggatcgtcggggcg
accgagctgcgtacgggcgaggaggatctggtgttcatcacctccgacgcgcagttgctc
cgctatccggcggcttcggtgcgcccgcaggggcggcccgccgggggcatggcgggcgtc
aagctggcggcgggggccgaggtgctgtcgttctcggcggtggacccggcgtccgaggcg
atcgtgttcacggtggccggttcgcacgggacgctggacgactcggtgctgacgtccaag
ctcaccccgttcgaccagtacccgcgcaagggccgggcgaccggcggggtgcgctgtcag
cggttcctgaagggcgaggacgtgctggtcttcgcctgggcgggtccggccccggcccgg
gccgcgcagaagaacggcaccccggccaagctgccggagccggacccgaggcgggacggt
tcgggcacgccgctgctggagaaggtggccgtgatcgcgggcccgccgctgtaa
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