Streptomyces californicus: I6J39_29675
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Entry
I6J39_29675 CDS
T07611
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
scal
Streptomyces californicus
Pathway
scal00523
Polyketide sugar unit biosynthesis
scal01100
Metabolic pathways
scal01110
Biosynthesis of secondary metabolites
scal01250
Biosynthesis of nucleotide sugars
Module
scal_M00802
dTDP-D-forosamine biosynthesis
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I6J39_29675 (rfbH)
Enzymes [BR:
scal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
I6J39_29675 (rfbH)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QRV31021
LinkDB
All DBs
Position
complement(6809872..6811176)
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AA seq
434 aa
AA seq
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MSHRKDRLLAEVRAYHREQESGGRFEPGVTEIWPSGAVLDANDRVALVEAALTMRIAAGS
DCRKFESAFARRLGLRKAHLTNSGSSANLLALTALTSPVLGERRLRPGDEVITVAAGFPT
TVNPIIQNGLVPVFVDIELGTYNATAEHVARAIGPRTRAISMAHALGNPFQAAEIAELAE
AHGLFLVEDNCDAVGSTYRGRLTGTFGDLSTVSFYPAHHLTMGEGGCVLTSNMALARVVE
SLRDWGRDCWCEPGESNRCLKRFSYQMGTLPEGYDHKYIFSHVGYNLKATDIQAALGRSQ
LNRLDEFCAARRHNWRRLREGLDGLPHLLLPRATEGSDPSWFGFVMTIGPEAPFTTAELV
AFLEERRIGTRRLFAGNLTAHPAYQGVEHRVSGTLTNSDIVTGRTIWTGVYPGLTDEMID
YVVTSIKEFVAARG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgcaaggaccgcctcctcgcggaggtgcgcgcctaccaccgggagcaggaa
tccggcgggcgcttcgagccgggggtcaccgagatctggccctcgggcgccgtgctcgac
gcgaacgaccgggtggcgctcgtggaggcggcgctcacgatgcggatcgcggcgggctcc
gactgccggaagttcgagtcggcgttcgcccgccggctcgggctgcgcaaggcgcacctg
accaactcgggctcctcggcgaacctcctggcgctcaccgccctcacctcgcccgtgctg
ggcgagcgcaggctgcggccgggcgacgaggtgatcaccgtcgcggccgggttccccacc
acggtcaacccgatcatccagaacggtctggtgccggtcttcgtcgacatcgaactcggc
acctacaacgccaccgccgagcacgtggcccgcgcgatcggaccgcgtacccgggccatc
tccatggcgcacgcgctgggcaaccccttccaggcggccgagatcgccgaactcgccgag
gctcacggcctgttcctcgtcgaggacaactgcgacgcggtgggctccacctaccgcggc
cggctcaccggcacgttcggcgacctgtcgaccgtcagcttctatccggcgcaccacctg
acgatgggcgagggcggctgcgtcctgacctcgaacatggcgctggcccgggtggtggag
tcgctgcgcgactgggggcgcgactgctggtgcgagccgggcgagagcaaccggtgcctc
aagcgcttctcgtaccagatgggcacgctgccggagggctacgaccacaagtacatcttc
tcgcacgtggggtacaacctgaaggccacggacatccaagcggcgctgggccgcagccag
ttgaaccggctcgacgagttctgcgcggcgcgtcggcacaactggcggcggctgcgcgag
gggctggacgggctgccgcacctgctgctgccccgggccaccgagggcagcgatccgagc
tggttcggcttcgtcatgacgatcgggcccgaggcgccgttcacgacggcggagctggtg
gcgttcctggaggagcgcaggatcggcacccgccggctgttcgccggcaacctcacggcg
caccccgcctaccagggggtggagcaccgggtgtccgggacgctgaccaacagcgacatc
gtcaccgggcggaccatctggaccggcgtctacccggggctcaccgacgagatgatcgac
tacgtcgtcacctccatcaaggagttcgtcgcggcccgcggctga
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