Streptomyces californicus: I6J39_32160
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Entry
I6J39_32160 CDS
T07611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_32160
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_32160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
MarR_2
HTH_37
HTH_3
Sigma70_ECF
MarR
IF2_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QRV31476
LinkDB
All DBs
Position
complement(7393771..7394667)
Genome browser
AA seq
298 aa
AA seq
DB search
MTAMSVQAAGTTTPQSGDRIGARAADVTGELPWVEDAGKVAPQDARALSKIFFDKLQVLE
EGTHEHQYARNTLIEMNLSLVRFAASRFRNRGGDDTEDIIQVGTIGLIKAIDRFDLSREV
EFATFAVPYIVGEIKRFFRDTTWSVHVPRRLQELRVDLAKAKEQLSAKLDRDPTVKELAA
HLDLPEEEIIEGLVAANGYSAGSLDTPSADSDSGQEQRAYADVLGEADPGMEAVENLHAL
APLLEQLDDRERRIVQMRFGAEMTQSQIGAELGVSQMHVSRLLSRIVQQLRKGMCVEA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgatgtcagtgcaggccgccgggacgacgacgccgcagagcggtgaccggatc
ggtgcgcgggccgcggacgtcaccggtgagctgccctgggtcgaggacgccgggaaggtc
gccccccaggacgcgcgggccctgtcgaagatcttcttcgacaagctccaggttctggag
gagggcacgcacgagcaccagtacgcgcggaacaccctgatcgagatgaacctctccctg
gtgcggttcgcggcctcccggttccgcaaccggggcggcgacgacaccgaggacatcatc
caggtcggcacgatcggcctgatcaaggccatcgaccggttcgacctgtcgcgcgaggtc
gagttcgccaccttcgccgtgccctacatcgtcggtgagatcaagcggttcttccgcgac
accacctggtcggtgcacgtgccgcggcgcctccaggagctgcgggtggacctcgccaag
gcgaaggagcagctctcggcgaagctcgaccgcgacccgaccgtcaaggagctggccgcc
cacctcgacctcccggaggaggagatcatcgagggcctggtcgccgcgaacggctactcg
gccggctcgctggacaccccctcggccgacagcgactcgggccaggagcagcgtgcgtac
gccgacgtgctgggcgaggccgacccgggcatggaggccgtggagaacctgcacgccctg
gccccgctgctggagcagctcgacgaccgtgagcgccggatcgtgcagatgcggttcggg
gcggagatgacgcagtcgcagatcggtgcggagctgggtgtctcccagatgcacgtgtcg
cggctgctcagcaggatcgtccagcagttgcgcaagggaatgtgcgtcgaggcgtga
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