Streptomyces californicus: I6J39_32310
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Entry
I6J39_32310 CDS
T07611
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
scal
Streptomyces californicus
Pathway
scal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J39_32310 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scal03400
]
I6J39_32310 (uvrA)
DNA repair and recombination proteins [BR:
scal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J39_32310 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6J39_32310 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
SMC_N
DnaJ_CXXCXGXG
nSTAND1
AAA_16
DUF4350
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QRV31504
LinkDB
All DBs
Position
complement(7424896..7427313)
Genome browser
AA seq
805 aa
AA seq
DB search
MHSPHDPYVRVRGAREHNLKDVRVDIPRDTLTVFTGVSGSGKSSLAFGTIYAEAQRRYFE
SVAPYARRLIHQVGAPAVGEITGLPPAVSLEQRRSAPGSRSSVGTVTTLSNSLRMLFSRA
GDYPPGAERLDSDSFSPNTAVGACPECHGLGRIHRTDEGLLVPDPSLSIREGAIAAWPGA
WQGKNLRDVLDALGYDVDRPWRELDAKDREWILFTDEQPVVTVHPVRDAGRIQRPYQGTY
MSARHYVLHTFADTKSRSLRAKAERFLTSAPCPVCGGSRLRPEAMAVTFAGRTIAELAGL
PLSVLAEVLEGADGEETARVLTADLLARIGTVTELGLGYLSLDRTAPTLSSGELQRLRMA
TQLRSGLFGVVYVLDEPSAGLHPADTEALLGVLGRLKEAGNSVFVVEHQMDVVRRADWLV
DVGPLAGEHGGRVLHSGPPEGLAEVPESATRRFLFPEAGPGAAPVREKRAPSGWIRLTGV
ERHNVRGVDAAFPLGVFTAVTGVSGSGKSTLVGQVLAGALADREAGEEPVAGDRYCATAT
GLEAVDRLVQVDQKPIGRTPRSNLATYTGLFDTVRKLFARTEKARGRGYGAGRFSFNVSG
GRCETCQGEGFVSVELLFLPSTYAPCPDCHGARYNPETLEVTLEGLTIAQVLDLTVESAA
EFFSGTPAAERPLRTLLDVGLGYLRLGQPATELSGGEAQRIKLAAELQRTRRGHTLYLLD
EPTTGLHPADVEVLMRQLHALVDAGNTVVVVEHDMAVVAGADHVVDMGPEGGDRGGRIVA
AGTPEEVAKSAGSRTAPYLAKALRR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcactccccccacgatccgtacgtccgggtgcgcggcgcccgcgagcacaacctgaag
gacgtgcgggtcgacatcccacgcgacacgctgaccgtcttcaccggcgtgtcggggtcc
gggaagtcctccctggccttcgggaccatctacgcggaggcgcagcggcggtacttcgag
tccgtcgccccgtacgcgaggcggctcatccaccaggtgggcgcgccggccgtcggggag
atcaccgggctgccgcccgccgtctcgctggagcagcggcgctcggcgccggggtcccgg
tcgtcggtggggacggtgaccaccctctccaactcgctgcggatgctcttctcccgcgcg
ggcgactatccgccgggggccgagcgcctggattccgactcgttctcgcccaacacggcg
gtcggggcgtgtccggagtgccacggactggggcggatccaccgcacggacgaggggctg
ctggtgcccgacccctccctgtcgatccgggagggggcgatcgccgcctggccgggcgcc
tggcagggcaagaacctgcgggacgtcctggacgcgctcgggtacgacgtcgaccggccg
tggcgcgagctggacgcgaaggaccgggagtggatcctgttcaccgacgagcagccggtg
gtcacggtgcatccggtgcgggacgcgggacggatccaacgcccctaccagggcacgtac
atgagcgcccggcactatgtgctgcacaccttcgccgacacgaagagccggtccttgcgg
gcgaaggcggaacgcttcctcaccagcgccccgtgcccggtctgcgggggcagccggctg
aggccggaggcgatggcggtgacgttcgctgggcggaccatcgcggagctggccgggttg
ccgctgtccgtactggccgaggtgctggagggggcggacggcgaggagacggcccgggtg
ctgacggccgatctgctggcgcggatcgggacggtgacggagctggggctcggctatctg
agtctggaccgcacggctccgacgctctcctcgggcgagctgcaacggctgcggatggcc
acgcagctgaggtcgggcctgttcggtgtcgtctacgtcctggacgagccgtcggccggg
ctgcaccccgcggacacggaggcgctgctcggcgtgctggggcggctcaaggaggcgggg
aactcggtgttcgtggtggagcaccagatggacgtggtgcggcgggcggactggctggtg
gacgtgggcccgctggccggggagcacggcgggcgggtgctgcacagcgggccgcccgag
gggctggccgaggtcccggagtcggcgacgcgccgcttcctgttccccgaggccggcccc
ggcgccgcaccggtacgggagaagcgggcgccgtccggatggatccggctcaccggggtg
gagcggcacaacgtgcggggcgtcgacgcggcgttcccgctcggggtgttcacggcggtg
accggagtctccggttcgggaaagtccacgctggtgggccaggtgctcgccggggcgctg
gcggaccgggaggcgggcgaggagccggtggcgggtgaccggtactgcgcgacggccacc
gggctggaggcggtggaccggctcgtgcaggtggaccagaagcccatcgggcggacgccc
cgctccaatctggccacgtacaccggcctgttcgacacggtgcgcaagctgttcgcgcgg
acggagaaggcccgggggcgggggtacggcgcggggcggttctcgttcaacgtgagcggt
gggcggtgcgagacctgccagggcgaggggttcgtctcggtggagctgctgttcctgccc
agtacgtacgcgccgtgcccggactgccacggcgcgcgctacaacccggagaccctggag
gtcaccctggagggtctgacgatcgcccaggtcctcgatctgaccgtggagtcggcggcg
gagttcttctccggcacgccggccgccgagcgcccgctgcggaccctgctggacgtgggg
ctcggctatctgcggctcggacagcccgccacggagctgtcgggcggcgaggcgcagcgg
atcaagttggcggccgagctccagcgcacccggcgcggtcacacgctgtatctgctggac
gagccgacgacggggctgcatccggccgatgtcgaggtgctgatgcggcagttgcacgcg
ctggtcgacgccgggaacaccgtggtggtcgtggagcacgacatggcggtggtggcgggc
gccgaccacgtcgtggacatggggccggagggcggggaccggggcggccggatcgtcgcg
gccggaacgcccgaggaggtggccaagtcggccggaagccgtacggcgccgtacctcgcg
aaggcgctgcgccgctga
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