Streptomyces californicus: I6J39_32430
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Entry
I6J39_32430 CDS
T07611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_32430
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_32430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_24
HTH_23
Sigma70_ECF
MarR
NirdL-like_HTH
HTH_37
HTH_31
HTH_3
DUF7343
HTH_IclR
KORA
GerE
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QRV31525
LinkDB
All DBs
Position
7459902..7460786
Genome browser
AA seq
294 aa
AA seq
DB search
MSTTSQRPRRSAVSEHGTTATIAPAALPRVEDPAKIAPKDARALGALFFEQLQVLEEGTH
EYQYARNTLIEMNLSLVHFAAKRFRNRGSGEMEDIIQVGTIGLIKAIDRFELSREVEFTS
FAIPYIVGEIKRFFRDSTWAVHVPRRLQELRVTLAKTREALAGRLDRDPTVAELAKHLNL
SEEEVIEGLIAANGYTAGSLDLPIGVEQSSAETVTYGDIKGDLDPAMELVEDLHALAPLL
ERLDERDREIVAMRFGQELTQAEIGERLGISQMHVSRLLSRLLAKLRKEMLTQN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacatcgcagcgccctcggcgctccgccgtatcggaacacggcacgaccgcc
accatcgctcctgcggcgcttccacgggtcgaggaccccgcgaagatcgccccgaaggac
gcccgggcgctgggagccttgttcttcgagcagttgcaggttctcgaagagggcacacac
gagtaccagtacgcacgcaacaccctgatcgagatgaacctctccctggtccatttcgcc
gccaagcgattccgcaatcgcggcagcggcgagatggaggacatcatccaggtgggcacg
atcggcctgatcaaggcgatcgaccggttcgagctcagccgggaggtcgagttcacctcg
ttcgccatcccctacatcgtgggggagatcaagcggttcttccgcgattcgacgtgggcc
gtccacgtcccgcgccgactgcaggaactgcgggtgaccctggccaagacgcgcgaggcc
ctcgccggccggctcgaccgcgacccgacggtcgccgaactggccaagcacctgaacctc
agcgaggaagaggtcatcgaggggctcatagcggccaacggctacaccgcgggctcgctc
gacctgcccatcggcgtcgagcagagcagcgccgagacggtcacctacggagacatcaag
ggagacctcgacccggccatggagctggtcgaggacctccacgccctggcccctctgctg
gagcgactggacgaacgggaccgcgagatcgtggccatgcggttcggccaggagctgacc
caggcggagatcggggaaaggctcggcatctcccagatgcacgtctcccggctgctctcc
cgactgctcgccaagctccgcaaggagatgctcacccagaactga
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