KEGG   Streptomyces californicus: I6J39_34555
Entry
I6J39_34555       CDS       T07611                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
scal  Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:scal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scal02048]
    I6J39_34555
Prokaryotic defense system [BR:scal02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    I6J39_34555
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QRV32480
LinkDB
Position
unnamed2:109044..110513
AA seq 489 aa
MLLRRLTEYATRAEADGELPPPYYRPKRIQWILQISQDGTSATFVDRRPAKGERAQETAA
PYMYRSGTMPPPYLMVDTAQYVFGLVKQVPGKPVSERGVADARRRRGAYAALLLEWADAV
PEDSYAAVVRMFVTSGVLQSLTVPEEMTAADNIALMVGTTWLHRLRSAEERWAAVVRSRK
AGRTAAGLCLVCGKYRELLNTIPESIKSGAIPSSSRGRDAQLVSINSAAQGRGGAIQLVN
TPVCEACGGRAMAALNLLLASDTNRRRAADSVTVWWTQEPADDLSDSLDAPTDATVARLL
ASLHEHPDPVTAGRVDPRAYYALTLGLNNARAVVLDWLDIPVGRLRNHLGAWFEDHRVHD
GWNQRYVYLPLWRLALAAGRWDAKANKYAPASAPKGLEQELLHAALTRGPVPARLLPHLL
QRIRADRRIDHPRTALLRLALHTNRKDHQVTAPADRLDSTQLDPGYLCGRVFALLEAIQY
AALPEVKRS
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgctgctgcgccgtctgacggagtacgccacgcgcgccgaggcggacggcgagctgccg
ccgccgtactaccggcccaagcggatccagtggattctgcagatctcgcaggacggcacg
tccgcaaccttcgtggaccggcgcccggcgaagggagagcgggcgcaggagacagcggct
ccgtacatgtaccggtcggggacgatgccgccgccctatctgatggtggacaccgctcag
tacgtcttcggcctggtgaagcaggttcccggtaagcccgtctccgagcggggggtcgcg
gacgcgcgccgccggcgtggggcgtatgccgccctcctgctggagtgggccgacgcggtt
cccgaggattcgtatgccgccgtggtgcggatgttcgtgaccagcggtgtcctgcagtcg
ctcaccgtgccggaggagatgacggcggccgacaacatcgcgttgatggtcggcaccacc
tggctgcaccggctgcgcagcgcggaagaaaggtgggcagctgttgtgcggtcgcggaag
gctggcaggacggccgccggcctgtgtctggtgtgcgggaagtaccgcgagctgctcaac
accatcccggagagcatcaagtcgggtgccattccgtcgagcagccggggccgtgatgca
cagctggtcagtatcaactctgccgcgcagggccggggtggggccatccagctcgtcaac
acgcccgtgtgcgaggcgtgcggggggcgagccatggccgccctgaacctgctgctcgcc
agcgacacgaaccggcggcgagctgccgattcggtgaccgtgtggtggacgcaggagccg
gcggacgacttgtccgattctctggacgctcccaccgatgcgacggtggcgaggctgctg
gcgtcgctacacgagcatcctgacccggtcaccgccgggcgggtcgatccccgtgcctac
tacgcgctgaccctcgggctgaacaatgcccgggcggtggtcctggactggctggacatc
cccgtcgggcgactgcgcaaccacctgggtgcctggttcgaggaccaccgcgtccacgac
ggctggaatcagcgctacgtctaccttccgttgtggcggctcgccctcgctgccggccgc
tgggacgccaaggcgaacaagtacgcccccgcaagcgcccccaagggtctggagcaagag
ctcctccatgccgccctgacccgagggccggtgcccgcccgcctccttccccacctgctg
cagcgcatccgagcggaccgccgcatcgaccacccgcgcaccgccctgctccgcctcgcg
ctccacaccaaccggaaggaccaccaggtgaccgcccccgccgaccgcctcgacagcacc
cagctggaccccggctacctgtgcggacgcgtcttcgccctcttggaggccatccagtac
gcggcgctcccggaggttaagaggtcctaa

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