Struthio camelus australis (South African ostrich): 104137792
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Entry
104137792 CDS
T08512
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104137792 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104137792 (VPS8)
Membrane trafficking [BR:
scam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104137792 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
Beta-prop_HPS5
Beta-prop_WDR3_1st
WDR55
ANAPC4_WD40
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104137792
NCBI-ProteinID:
XP_009663415
Ensembl:
ENSSCUG00000005796
LinkDB
All DBs
Position
Unknown
AA seq
1372 aa
AA seq
DB search
MAAAFSGLRLGSSYYKLLQQQIDDKEFDIPQVDTPPTLESILNETDDEEESFILEDPFLL
NIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAAD
KVDAGLPTAIAASNLIAVGTSHGLALIFGKDQNQALRLCLGSTAIGAQYGAISALSINND
CSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFE
LSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIG
LKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAI
HVTKQKQLHLHYDLINFSWINSRTAVLLDSVEKLHVIDRQTQEELETVEISEVQLVYNSS
HFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTKSVHVMTLRSWRERVDHLLKQ
ERLTDALALAWSFYEGKAKAVVGLSGDTSKRKAVIADRMVEILLHYADRTLKKCPDQGKI
QVMEQHFQDMVPVIVDYCLLLQRTDLLFSQIYDKMSENSVAKGIFLECLEPYILSDKLMG
ITAQVMKDLLLHFQDKNRLENMEACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGM
NDFISPMEKLFKAIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPL
VKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQ
RIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDS
RHSERQQVLLELLQAGGIVQFEENRLIQMAEKAEFYQICEFMYERELRYDKIIGCYLRDP
VRKEEVYNYIHNILSMPGYSAEEKQSVWQKALDHIEELLSLSPCKAADLVAIHFSEQIER
IITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCITEQFVELLCHYSPDQVLETLKVLE
FCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLKLTQDDESKKNIED
TLMKTIALCQRNSHSLNQQQREALWFPLLEAMMSPQKLSGSSQCRYSESLKSLTMQVLNN
MAAFIALPSILQRILQDPIYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWS
LCNLRASVTRGLTPKQDYCCICLQQYKRRQETADEIIIFSCGHLYHSLCLLSKECGLVTK
GLMRWTCYKCNSGNKGGKLSENFSELKKGSGTSLAQAGSESPLDPQQIQAFDQLCRLNRG
TSRLALLTELSRNHGGEKHGLLSISHGDPATSSVFQNENFQLHLVPPPLAED
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccttctccgggctgcggctgggcagctcgtactataaattgctgcagcag
cagatcgatgacaaagagtttgacattcctcaagttgataccccaccaacgctggaaagc
atcttaaatgagactgatgacgaagaagagtctttcattttggaggatccctttctcttg
aacattgataacacggatacacactcctacgacacatcttctgtagcaagctctgatagt
ggggaccggacacacctgaaaagaaagaaaaaactccctgattctctctctctccatgga
tcagttatacggctctcacttctgaaaggaatttctgcccaaatagtatctgcagcagac
aaagtggatgcaggcttgcccactgcaatagcagcatcaaatctgatagcagtggggact
tcccatggattagcactaatttttggaaaagatcaaaaccaggctcttcgactttgtctg
ggcagcactgctattggggctcagtacggggctatctctgctctcagtatcaacaatgac
tgttcgaggctgctgtgtggctttgcaaaaggacagatcacaatgtgggatctggccagt
gggaagctgctgcgatcaataacagatgctcatcccccaggaacagccattttgcacatc
aagtttacagatgacccgacgcttgcaatttgcaatgacagcggaggctccgtgtttgaa
ctgtcatttaaaagggtaatgggagtgaggacgtgtgaatctcgatgtctcttcagcggc
tcaaagggagaagtttgctgtattgaaccactacatgcgaaagttgagctgagagaccac
cctattacccagtattcactgctggccatggcttccctgacaaagatactagtcattggc
ttgaagccatctctgaaagtgtggatgactttcccctatggtcgtatggacccttctagt
gtcccgcttctggcgtggcactttgtggctgtgcagaactccgtgaaccccatgcttgcc
ttttgtcgaggagatgttgttcattttcttctggtaaagagagatgatactggtgcaata
cacgtcacaaagcagaagcagcttcatctgcactatgacctcatcaatttttcttggata
aactcacggacagcagtgcttctggacagtgtggagaagctgcatgtgatagatcgccag
acgcaagaggaactggagaccgtagagatctcagaagttcagctagtctacaacagcagc
cacttcaaatcgctggcaacggggggcaatgtcagcgaagcactggcattggttggagag
aaggcttgttatcagtccatcagcagttgtggtggtcagatcttttaccttggaactaag
tctgttcatgtcatgacgttgaggagctggagagagagagttgaccaccttctgaaacaa
gagcgtctcactgatgccttggctctagcttggtctttttatgaaggtaaagcaaaggct
gtagtaggcttgtctggggacacaagcaagcggaaagcagtcattgcggacagaatggtt
gaaatccttctccattatgctgatcggactttgaagaaatgccctgaccaagggaaaatc
caggttatggagcaacattttcaggacatggtgcctgtcatagttgactactgtctctta
ctccagcgcacggatctattatttagccagatatatgataagatgagtgagaattctgtg
gctaaaggcatctttctggagtgcttggagccatacatcttaagtgataagttgatggga
atcacagctcaagtgatgaaagacttgctccttcacttccaagacaagaacagattggaa
aatatggaagcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagtt
cttctgtgctgggaaaaccatctctacgatgccatgatttatgtgtacaacagtgggatg
aatgacttcattagtcccatggagaaactgttcaaagccattgctcctccactgaatgct
gggaaatctctcacagatgagcaggtggtaatgggcaacaagctgcttgtatatataagc
tgctgcttggcaggccgtgcgtatccgttgggtgatattcctgaagatctggtacctttg
gttaaaaatcaggttttcgaatttctcatccggctgcattcaaccgagggatctgtggat
gaagaggtgtatccttatgttcgtaccttgctgcactttgacactcgggaattccttaat
gttcttgctctgacttttgaagattttaagaatgacaagcaagctgtggaatatcagcag
agaattgtggacatacttctgaaagtcatggtagagaattccgacttcaccccgtcgcag
gttggctgtctctttaccttccttgcccgtcagctcgccaagcccaacaacacgttgttt
gtgaacaggacgcttttcgaccaggtccttgaatttctgtgcagtcctgatgatgactct
cgccattcggagaggcaacaggtccttttagagttgctccaggcaggagggatagtacag
tttgaagagaaccgccttatccaaatggcagaaaaagctgaattctatcagatttgtgag
ttcatgtatgaacgagagcttcgctatgacaaaatcattggctgttacctgcgtgatcca
gtaaggaaggaagaagtatacaactacatacacaacatcctgtctatgcctgggtacagt
gctgaagagaagcagtcagtgtggcagaaagctttggaccatatagaggagttgttgtcg
ctgagcccatgtaaagcagccgacttggtagccattcacttcagtgagcagattgagcgc
atcattacaaaccttcaggaccagttcttactcttccagtttctgaggagtcttcttgac
ccaagagaaggcataaatcaggacctgatacacttaccgccctgcatcacggagcagttt
gttgagctgctgtgtcactacagcccagaccaggttttggagacgctgaaagttttggaa
ttctgcaggctggaagaaaccatccagataacgcagaagcatcagctccatgaagcatcc
tcgtatttactggagaagaagggagatatccatggcgcctttctggttatgctcgagcga
ttgcagagcaagttgctgaagcttacgcaagatgatgaaagtaagaaaaatatcgaagat
accttaatgaaaacaattgctctttgccagaggaattcacacagtttaaaccagcaacaa
cgagaggccctctggtttcctctgctggaggctatgatgtccccacagaaactgtctggt
tcttcacagtgtcgatactccgaatctttgaagagtttgaccatgcaagtgctgaacaac
atggctgcgtttattgctcttccttcaatcctgcagcgaattctacaggatcccatttat
ggaaaagggaaacttggagaaattcaaggacttgtcctgggcatgttggacacttttaat
tatgaacaaacccttttagagacaactacgaatcttttaaaccacgatctccactggtcc
ctgtgtaacctaagagcttctgtcactagagggcttaccccaaagcaggattactgctgc
atttgtctacagcagtacaaaagaaggcaagaaactgctgatgaaatcatcattttcagc
tgtggccacttgtaccattccctgtgtctgctgagtaaagagtgtgggttagtaaccaaa
ggcctgatgagatggacgtgctataagtgcaactcaggcaacaagggaggaaaactgagt
gagaacttctcagagctgaaaaaaggaagtggaacatccttggcacaggcaggttcagag
tctccgttggatcctcagcaaatccaagcttttgaccagctctgccgactcaaccgagga
acctccaggttagctctcctgactgaactgtctcgcaaccacggcggtgaaaagcatggg
ctgctcagcatttcccacggtgaccctgccacgagcagcgtcttccagaacgagaatttc
cagctccatctggtcccccctccactcgctgaagactaa
DBGET
integrated database retrieval system
