KEGG   Struthio camelus australis (South African ostrich): 104138149
Entry
104138149         CDS       T08512                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104138149 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scam03019]
    104138149 (EXOSC1)
Messenger RNA biogenesis [BR:scam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104138149 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     104138149 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 RRP4_S1
Other DBs
NCBI-GeneID: 104138149
NCBI-ProteinID: XP_009663907
Ensembl: ENSSCUG00000001873
LinkDB
Position
Unknown
AA seq 148 aa
MCLPVVSVVRDAESQLLPDVGAVVTCKVCSINSRFAKVHILYIGSTPLKSTFRGTTRRED
IRATEKDKVEVYKSFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPI
SWCEMQCPRTHTKDFRKVARVQPEFLQT
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtgcctgcctgttgtgtctgtggtgagagatgccgagtcccagctcctgcctgatgtg
ggggccgttgtgacatgcaaggtttgcagcattaactcccgctttgccaaggtgcacatc
ctgtacatcggctccacacccctgaagtccacgttccggggaaccactaggagagaagat
attcgagccacagagaaagacaaggtagaagtttacaagagtttccgccctggtgacata
gtcctggccaaagtcatctccctgggggatgcacagtccaactacctgctgagcacggcg
gagaacgagctgggtgtggtggtggctcgcagcgaagcaggggtgcagatggtgcctatc
agctggtgcgagatgcagtgcccacggacgcacaccaaggacttccgcaaggtggcccgc
gtgcagcccgagttcctgcagacctag

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