Struthio camelus australis (South African ostrich): 104138175
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Entry
104138175 CDS
T08512
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104138175 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104138175 (TAF5)
03036 Chromosome and associated proteins [BR:
scam03036
]
104138175 (TAF5)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104138175 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104138175 (TAF5)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104138175 (TAF5)
STAGA complex
104138175 (TAF5)
TFTC complex
104138175 (TAF5)
SAGA complex
104138175 (TAF5)
SLIK complex
104138175 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
104138175
NCBI-ProteinID:
XP_009663933
Ensembl:
ENSSCUG00000002033
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAQEAEGLGVYVLLRALHLSRGCVSHCVFTSSFSLAYKLLLYGNTFAVAGGVVVEDQPDV
SAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHES
EAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLK
RHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLK
EPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELKDSDKL
DKIMNVKEAARRVRLGPDCLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWS
VTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYL
LSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ
PLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFS
PNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLW
DAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYS
SQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagaggctgaaggacttggtgtttatgttctgctcagagcacttcaccttagc
aggggatgtgttagccactgtgtatttactagttctttcagtctcgcttacaagctcttg
ttatatggtaacacttttgcagttgcaggaggtgttgttgtggaagaccagccagatgtg
agtgcagtattatctgcctacaatcagcagggggacccgacactgtacgaggaatactac
agtggactgaaacacttcattgaatgttccctggactgtcatcgagctgaattatcccag
ctgttttatcctctctttgtgcacatgtatttggaattggtttacaatcaacatgagagt
gaagcaaagtctttctttgaaagatttcatggggatcaggagtgttattaccaggatgac
ctgcgtgtattatctagcttaaccaaaaaagaacatatgaaaggtaatgagaccatgctg
gatttccggacaagcaagtttgtgctacgtatttcccgtgactcttatcaactcttgaag
agacatcttcaggaaaagcagaacaatcagatctggaacattgttcaggaacatctctac
attgatatctttgatggaatgcctcgcagtaagcaacagatagatgctatggttggaagc
ctggctggggaggcaaaacgagaggctaataaagcaaaggttttctttggcttacttaaa
gaaccagagtttgatgtgcctttggatgatgaagatgaagaaggggaaaatgaggaggga
aaaccaaagaagaagaaacctaaaaaagatagcgtagggtcaaaaagtaaaaaacaagac
cctaatgctcctccccaaaacagaattcctctgcctgaactgaaagactctgacaagttg
gataaaataatgaatgtgaaggaagccgcaaggcgtgtacgtcttggcccagactgcttg
ccatccatctgtttctacacattccttaatgcttatcagggtctaactgcagtggatatt
acagatgactctagcatgattgtaggaggctttgctgactctactgtcagagtgtggtct
gtgactccgaaaaagctacgtagtgtgaaaacagcagcagatctcagtctcatcgacaaa
gagtcagacgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaagatt
ttatatggtcacagtggacctgtctatggcaccagcttcagtcctgataggaactatctg
ttgtcctgttctgaggatggcactgtcagactatggagtcttcaaacattcacgtgtttg
gtgggatataaaggacacaactatccagtatgggatacgcagttctctccttatggatat
tactttgtgtcagggggacatgatagagtggctcgtctgtgggcaacagatcactaccag
cctttacggatatttgctggccatcttgctgatgtgacatgtacccgatttcatcccaac
tctaactatattgctacgggctcagcagacaggactgtacggctctgggatgttttgaat
gggaactgtgtaagaatattcactggacataagggaccaattcattcattggcattttct
ccaaatggacgatttctggctactggagcaacagatggaagagttctgctctgggacatt
ggacacggcttgatggtgggagaattgaaagggcacactgacactatctacgcactcaga
ttcagtagagatggagagattttagcatcaggttcaatggataacacagttcggctgtgg
gatgctgtgaaagcatttgaagatttagaaactgatgattttactacagccactggacat
ataaacttgcctgaaaactcgcaggacttgttactaggtacatacatgaccaaatcaacc
ccggttgtacacctccatttcacacgcagaaacttgctgctagctgcaggagcctatagt
tcacagtaa
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