Struthio camelus australis (South African ostrich): 104138284
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Entry
104138284 CDS
T08512
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104138284 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Motif
Other DBs
NCBI-GeneID:
104138284
NCBI-ProteinID:
XP_009664104
Ensembl:
ENSSCUG00000002342
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
GGAPVAYPCACRVGFTDELCLTPRENACLNNPCRNGGTCDLLTLSEYKCRCPPGWSGKTC
QQADPCASNPCANGGQCVPFEAHYVCRCTTGFHGANCKQDVNECNILPPVCKNGGSCTNE
VGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTTYDCTCLPGFAGQNCEENI
DDCPGNNCKNGGTCVDGVNPYTCQCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNNHGG
YNCVCGNGWGGQAAPCACPGLFSRAAGVXGKVRHDLHGXQPXGERACCSAGLLCHLDDAC
ISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGANPCEHAGKCINTQGSF
QCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGWHMSPRETRASASLV
ATAVGGGFALSVSPGRPHAPAALCVVQGCVSSLFPFPGRMCNINIDECSSNPCHNGGTCK
DGINGFTCLCPEGFHDPKCLSEVNECNSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINN
NECESNPCMNGGTCKDMTSGYICTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYK
CNCLLPYTGATCEDVLAPCANGPCKNGGECRESEDYESFSCGCPSGWQGQTCEIDINECV
KSPCRNGATCQNTNGSYRCLCKAGFTGRNCDTDIDDCKPNPCHNGGSCSDGVGTFFCECL
AGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFN
GGTCVDGINTFTCMCPPGFTGSYCEHNINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGL
NCQNLVRWCDSSPCKNGGKCWQTNNLYRCECNSGWTGLYCDVPSVSCEVAAKQQGVDVAH
LCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAG
YHGVNCSEEINECLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTL
GPKCFNNGKCTDRVGGYSCICPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDYKCE
CRPGYTGRRCDSVVDGCKGKPCRNGGTCAVASNTGRGFICKCPPGFVGATCENDSRTCGN
LHCLNGGTCISIHKSSKCMCTPAFTGPECQYPASSPCNSNPCYNGGTCEFFSDASPYYRC
NCPANFNGLNCHILDFDFQGGIGQDIIPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGW
DGGDCSLNFNDPWKNCSQSLQCWKYFNDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQ
YCKDHFSDGHCDQGCNNFECEWDGLDCANNMPEKLADGTLVVVVLITPENLKNNSFNFLR
ELSRVLHTNVVFKKNPKGEYMIFPYYGNEEELKKHYIKRSTEDWSDMSSAVINKVKTSLY
SRAGRRQKRELDQMDIRGSIVYLEIDNRQCIQSSSQCFQSATDVAAFLGALASLGNLNIP
YKIEAVKSETAEPTRNSQLYPMYVVMAALVLLAFIGVGVLVSRKRRREHGQLWFPEGFKV
TESSKKKRREPLGEDSVGLKPLKNASDGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDT
DDQTDHRQWTQQHLDAADLRISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGG
LETGNSEEEDDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA
NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDL
INCHADVNAVDDLGKSALHWAAAVNNVEAAVVLLKNGANKDMQNNKEETPLFLAAREGSY
ETAKILLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTL
SPPLCSPNSYIGNLKPAVQGKKARKPSTKGLSCNGKDSKDLKARRKKSQDGKGCLLDNSS
VLSPVDSLESPHGYLSDVASPPLMTSPFQQSPSMPLNHLPGMPDAHMSINHLSMAGKQDM
AMGNSSRMAFDSVPPRLSHLPVSSPSTVMSSAPMNFSVGGAAGLNGQCEWLTRLQNGMVQ
NQYNPMRGNMQPGTHQQTQSLQHGMMTSLHSGLPTTSLSQMMSYQAMPNTRLASQPHLMQ
SQQLQQMQQQQLQQQNMQQQQQSQQPQQQPPQQQPQQHHNPSSNASGHLSQNFLGTELSQ
PDMQPVSSSTMAVHTILPQDSQMLPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSH
QLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
gggggcgccccggtggcctacccctgcgcctgccgcgtgggcttcaccgacgagctctgc
ctgacgccccgcgagaacgcctgcctcaacaacccctgccgcaacgggggcacctgcgac
ctgctgacgctcagcgagtacaagtgccgctgcccgcccgggtggtcaggtaaaacctgc
cagcaggccgatccctgtgcctccaacccctgcgccaacggagggcagtgcgtcccgttc
gaggcccactacgtctgccgctgcacaaccgggtttcacggggccaactgcaagcaggac
gtgaacgagtgcaacatcttgcctcccgtctgcaagaacggcgggagctgcaccaacgag
gtcggcacctaccagtgctcctgcaagcccgcgtacaccgggcagaactgcgagcacctc
tacgtgccctgcaatccctcgccctgccagaacgggggaacctgccgccagaccggagac
accacctacgactgcacgtgtctgccaggtttcgcgggtcagaactgcgaggagaacatc
gacgactgtccggggaacaactgcaagaacggaggcacgtgcgtggacggcgtcaatccc
tacacctgccagtgtccgccggagtggacaggccagtactgcactgaggatgtggatgag
tgtcagctcatgcccaacgcctgccaaaacggaggcacctgccacaacaaccacggtggc
tacaactgcgtctgcggcaacggctggggtggacaggcagctccctgtgcgtgccccggg
ctcttctctcgggctgctggcgtctaggggaaggtgcgtcatgacttgcatggctagcag
ccctgaggtgagcgtgcctgttgctccgcaggtttgctgtgccacctcgatgacgcctgc
atcagcaacccctgcaacgaaggctccaactgtgacaccaatcctgtcaatggcaaagcc
atctgcacctgcccttcgggctacatggggccagcctgcaaccaggacgtggacgagtgc
tcgctgggagccaacccttgtgagcacgcggggaaatgcatcaatacgcaagggtccttc
cagtgccagtgcctgcagggctactcggggccgcgctgcgagatagacgtcaacgagtgc
ctctccaatccctgccagaacgatgccacctgcctggaccaaattggcgaatttcagtgc
atctgcatgcccggctggcacatgtccccgcgggagactcgcgcctctgccagcctcgtt
gccactgcggtcggagggggatttgccctgtctgtgtcccctgggaggccgcacgcacct
gcggcgctgtgtgtcgtacaaggttgtgtttcatcgctcttccctttcccagggcggatg
tgcaacatcaacattgacgagtgctccagcaacccttgccacaatgggggcacgtgcaag
gacggcatcaacggcttcacgtgcctctgccccgagggcttccacgaccccaagtgccta
tccgaagtgaacgagtgcaacagcaacccctgcatccacgggaagtgccacgacgggctc
aacggctacaggtgtgattgcgacccaggctggagtgggacgaactgtgacattaacaat
aatgagtgtgaatccaatccctgcatgaatggtggcacctgcaaggacatgaccagtggc
tacatctgtacctgcagggaagggttcagtggacctaactgccagaccaatatcaacgaa
tgcgcttccaacccgtgtctgaatcaggggacgtgcattgatgacgtcgctggctacaag
tgcaactgcctcctgccctatacaggagccacgtgcgaggatgtgctggctccctgcgcc
aacggcccctgcaagaacggtggtgaatgcagggagtcggaggactacgagagcttctcc
tgcggttgcccgtccggctggcaaggtcagacgtgcgagattgacatcaacgagtgcgtg
aagagcccttgccgaaacggtgccacttgccagaacaccaacgggagctaccgctgcctt
tgcaaggcaggcttcaccggccgcaactgcgacaccgatatcgatgactgcaagccgaat
ccatgccacaatggcggctcctgctctgatggtgttggtaccttcttctgtgagtgcctg
gctggtttccgtgggcccaagtgcgaagaagacatcaacgagtgtgccagcaacccctgc
aagaatggtgccaactgcactgactgtgtcaacagctacacctgcacttgcccctccggc
ttcagtgggatccactgtgagaacaacacgcctgactgcacggagagctcctgcttcaac
ggagggacctgtgtggatggcatcaacaccttcacctgcatgtgtccacctggtttcaca
ggcagttactgtgagcacaacattaatgagtgtgactccaagccgtgcctgaacgggggc
acttgtcaggacagctacgggacatacaagtgcacttgtccccagggttacaccgggctc
aactgccagaacctggtgcgctggtgcgactcctctccctgcaaaaatggaggcaagtgc
tggcaaaccaacaacctgtaccgctgcgagtgcaacagtggatggacagggctctactgc
gatgtccccagtgtctcctgtgaggtggctgctaagcagcaaggcgtcgacgtagcccat
ctctgcaggaactcggggctctgcgtggacactggcaacactcacttctgccgctgccag
gccggctacactggcagctactgcgaggagcaggtggacgaatgctcccccaacccctgc
caaaacggagccacctgcacagactacctgggaggctattcttgcgagtgtgtggctggt
tatcatggagttaactgctcagaagagatcaatgagtgcttgtcccacccttgccagaac
ggaggaacctgcatcgatctcatcaatacctacaaatgctcctgccccagagggactcaa
ggggtgcactgtgaaatcaatgtggatgactgcagccctttctttgatcctgtcaccctg
gggcccaagtgctttaacaatggcaagtgcacggatcgggtaggtggctacagctgcatc
tgcccccctggctttgtaggggagcgctgcgagggagacgtcaacgagtgcctgtccaac
ccctgcgacgcgcgcggcacccagaactgcgtgcagcgtgtcaatgactacaaatgcgag
tgccggcctggctacacagggcgccgctgtgactcggtggtagatggctgtaagggcaaa
ccctgcaggaacggtggaacgtgtgcagttgccagcaacactggccgtggcttcatctgc
aaatgcccccctggttttgttggtgccacttgtgagaatgactcccgcacctgcgggaac
ttgcactgcctgaatggtggcacctgcatctccatccacaagagctccaagtgcatgtgc
acaccagccttcacgggtcccgagtgccagtacccagccagcagcccctgcaattccaac
ccctgctacaatgggggcacctgcgagttcttcagcgatgcttccccctattaccggtgc
aactgccctgccaacttcaatggcctcaactgccacatccttgactttgatttccaaggt
gggattgggcaggatatcatcccacctaaaatcgaggagaagtgtgagattgcagtttgt
gcagggtacgctggcaacaagatctgtgatgggaaatgcaacaaccacgcgtgcggctgg
gacggaggtgactgctccctcaatttcaatgacccctggaagaactgctcccagtcattg
cagtgctggaagtacttcaatgatggcaagtgcgactctcagtgcaacaacgctggctgt
ctgtacgatggctttgactgccagaagtatgaagggcagtgcaaccctctgtatgatcag
tactgtaaagatcacttctcagatggtcactgtgaccagggctgtaataattttgagtgc
gaatgggatggtctggactgcgcaaacaatatgccggagaagcttgcagacggcactctg
gtcgtggtggtcctgatcactccagagaacctgaagaacaattccttcaatttcctccgg
gagctgagccgtgtgctgcacaccaacgtggtcttcaagaagaaccccaagggagagtat
atgatctttccatactacggcaatgaggaggagctgaaaaagcattacatcaagaggtca
acagaggactggtcagatatgtctagtgctgtcatcaacaaagtaaagaccagcctctac
tccagggctggcagaaggcagaagagagagctggatcagatggacatcagaggatccatc
gtttacttggaaattgataaccgtcagtgcatccagtcctcttcccagtgcttccagagc
gcaaccgatgtggcggctttcctgggtgccttggcctcccttggcaacctgaacatcccc
tacaaaatagaagctgttaaaagtgaaacggctgagcccacaaggaactcccaactatat
cctatgtatgtagtgatggctgcgctggtcttgcttgctttcattggagtgggggtactg
gtatctcgtaagcggcgcagggagcatgggcagctttggttcccagaaggcttcaaagtg
acagagtcgagcaagaagaagcgacgagaaccacttggggaggattctgttggactgaaa
cccctcaaaaatgcttcagatggcacactgatggatgacaaccaaaatgaatggggtgat
gaggagaccttggacaccaagaagttcaggtttgaggagcaggcaatgctccctgataca
gatgatcagacagatcacaggcagtggactcagcagcacctggatgcagctgaccttcgc
atatcctctatggcacctaccccaccgcaaggtgaaatcgatgcagactgtatggatgtc
aatgttagaggccctgacggcttcacccccctcatgatcgcctcatgcagcggtggaggg
ctagagactggcaacagtgaagaggaagacgatgcccctgcggtcatctcagatttcatt
taccaaggcgccagcttacacaaccagactgaccgcactggtgagacggcgctccacttg
gctgccaggtactctcgctccgacgctgccaagcgcctgctggaggctagtgccgatgca
aacattcaggacaacatgggcaggactcctctccatgcagcagtctctgccgacgcccaa
ggagtcttccagatccttattagaaacagagcaactgatcttgacgcccgaatgcatgat
gggaccactcctctgatcttggctgctcgcttggctgtggagggcatgctggaggatctg
atcaactgccatgcagatgtcaatgccgtggatgatctaggcaagtcagcactgcactgg
gcagctgctgtgaataatgttgaagccgcagtagtcctcctgaagaatggtgccaataag
gatatgcagaacaataaggaggagaccccactgttcctcgcagccagagaagggagttat
gaaactgccaaaatcctcctggaccactttgcgaaccgcgacatcacagaccacatggac
cgtctcccgcgggatatcgcacaggaacgcatgcaccacgatatcgtgaggctgctggat
gagtacaacctggtgcggagcccaccactgcacaacggcccgttgggggcacccacgctg
tccccaccgctctgctctcccaacagctacattggtaacctgaaacctgccgtccagggc
aagaaggccaggaagccgagcaccaagggcctgagctgcaatggcaaggattccaaagac
ctcaaagcgaggaggaaaaaatcacaagacggaaaaggatgcctgctcgacaactccagt
gtgttgtcaccggtagactccctggagtcgccccatgggtacctgtcagatgttgcctct
cctccgctgatgacttctccatttcagcagtccccttccatgcctctgaatcatctgcca
ggcatgcctgatgcccatatgagcatcaaccacctcagcatggctgggaagcaggatatg
gccatgggaaactccagcaggatggcctttgattcagtgccaccacgtctctctcacctg
cctgtctccagccccagcacagtcatgagcagcgccccaatgaatttctccgttggtggc
gctgccggtctgaatgggcagtgcgagtggctcacgaggctgcaaaacggcatggttcag
aatcagtataatccaatgagaggcaacatgcaaccagggacgcatcagcaaacgcaaagc
cttcagcacggcatgatgacctccctgcacagtggcttgcccaccacaagcttgtcacag
atgatgagctaccaggccatgcctaacacccggctggcttcccagcctcacctgatgcag
agtcagcaactacagcagatgcaacaacaacagctgcagcagcaaaacatgcagcagcag
cagcagtcgcaacaaccccagcagcagccaccccagcagcagccacaacagcatcacaac
cccagctccaatgctagtggccacctcagtcagaatttccttggtaccgagctaagccag
cctgacatgcagccggtgagcagcagtaccatggcagtccacaccatcttgcctcaagat
tcccagatgctgcccacgtctctgccatcctcccttgcacagcccatgaccaccacacag
tttttaactccaccctctcagcacagttattcctcccccttggacaacacccccagccac
cagctccaggtgcccgatcaccctttcctaacaccgtctccggagtcaccggaccagtgg
tcgagctcctctcctcattccaatgtgtccgactggtccgaggggatctctagccctccc
acgagtatgcagtcacagatgggacacatccctgaagccttcaagtaa
DBGET
integrated database retrieval system
