Struthio camelus australis (South African ostrich): 104138410
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Entry
104138410 CDS
T08512
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104138410 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104138410 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAMININ_IV_B
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
104138410
NCBI-ProteinID:
XP_009664293
Ensembl:
ENSSCUG00000001107
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLVILLFQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGETWQIYRYFAYDCESSFPGISTGPMK
KVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHTL
GDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHN
TKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCD
DCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIA
GQCRCKVFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCKR
LVTGKQCSQCLPEHWGLSNDMDGCRPCDCDQGGALSNNCSSESGQCECRPHMFGRQCNQV
EPGYYFISLDHYIYEAEEANFGPGVNIVERQYTQDRTPSWTGVGFVRVPEGAYLEFYIDN
VPYSMEYEILVRYEPQLPDQWEKAVVSVSRPGKIPAGSRCGNTVPDDDTQVVSLSPGSRY
VVLPRPVCFEKGLNYTIRLELPQYSSVDTEMESPYTLIDSLVLMPYCKSLDIFTVGGSGE
DVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSS
VCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPNGCRSCECHLRGSYNAFCDAETGQCHCF
PGVYGRQCDRCLPGFWGFPSCQPCVTETKRVGGVWSPAWPQPWQYQRRVERGQGLPCGLA
TWHGLPSPRDAQMLEHVLQDPRGFRAGFSFEGLRVVMTSLRPVCPHLLHAVSPSRRCLAG
YYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPVTLQVICVCNAGYVGSRCDECASG
FFGSPDEVGGACHASIATEPPGVKPPFLLEEMELAVLGAIRREPPPVGPERQPRSLPSRG
EVLSLFPSCFWQFTGQCQCMPGFGGRTCRECQELFWGDPSVECRACDCNPRGIQTPQCDR
ATGQCVCNEGVEGPRCDKCSRGYSGFFPDCAPCHQCFALWDVVIGELANRTQQFLDRANA
LKITGVTGPYQQTLNTLEEKLSEIKIIIAQNPAAEPLKNIGTLFEEAEKLTADVTVKIAD
LEESLSALGLKSNSTDTDLSALETDAKSLERVVKELAEQLEFIKISDVRGALDSITKYFQ
MSLEAEDRVNASTVHPDSVVEVSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDELAGKLQ
SLDLSEAAEKTCGAPSGVSCAESECGGLNCRTAEGQKKCGGPGCDGLVTVAHNAWQKAMD
FDRDILSALAEVEQLSKMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDLRNLIKQ
IRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLHALTEDIRERVESLSDVEVILQQSAG
DIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGTQDL
LTSIESENAASEETLNNATLRLFKLEKSVEDLKQKAATNSENVDNIEDTIGIAKQNAEEV
KKVLNNELNTKYKTVEDLIAKKTEESADARRKADMLQDEAKALLAQANSKLQLLKDLENT
YENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgctggttatcttgttgtttcaggaggacaaaaaatgtttcatatgcgactccgaggat
cccttccacgatactctcaatcctgatagtcaccgtattgaaaatgtggtcaccacgttt
gctcccaatcgcctgaagctttggtggcagtcagaaaatggtctggaaaacgtgactatc
cagctgaacctggaggctgaatttcatttcactcatctcattatgacgttcaagacgttc
cgtcctgctgcgatgctaatagaaagatcgtctgattttggggaaacgtggcaaatatat
aggtattttgcatatgactgtgagagctcatttcctggaatttcaactggacccatgaag
aaagtggatgatataatttgtgactcccgatactctgacattgaaccctcaactgaggga
gaggtaatatatcgtgttttagatcctgcttttaggattgaagatccatacagtccaagg
attcaaaacctattaaagatcacaaatctgagagtcaaattcgtcaagctgcacacgcta
ggagacaatctcctggattcaaggatggagatccgagagaaatactactatgccatttac
gacatggtggtgcgcgggaactgtttctgctacggacatgccagtgagtgtgcgccggtg
gacggcttcaacgaagaggtggaaggaatggtccatgggcactgcatgtgcagacataac
accaaagggttaaactgtgagcagtgtttggatttctaccatgacttaccctggcgacca
gccgaaggtcgcaacagcaatgcatgcaaaaagtgcaattgcaacggccactccagccag
tgccactttgacatggccgtgtacatgaccactgggaacaccagtgggggggtgtgtgac
gactgccagcacaacacggtagggcgcaactgcgagcagtgcaagcccttctacttccag
caccccgagagagacctgcgggaccctgacgtctgcgagccttgtaactgtgacccagct
ggctcccaaaacggtggaatatgtgatcgctacaccgatttctctactggccttattgct
gggcagtgccgttgtaaagtgtttgtggaaggagagcgctgtgacctctgcaaagaaggg
ttttacggcctgagtgctgatgacccagcgggttgtcagtcttgtgcatgtaatcctttg
ggtacccatcccggagggaacccttgtgattcggagacaggaaactgctattgtaagcgt
ctggtaacaggaaagcagtgcagtcagtgtctgcctgagcactggggtctgagcaacgac
atggatggatgtcggccttgcgattgcgaccagggaggagccttgagcaacaactgctcg
agcgagtccggccagtgcgagtgccggccccacatgtttggacgtcagtgcaaccaagtg
gagcccggctattactttatttcgctggaccattacatctatgaggccgaggaagccaac
tttggtcctggagtaaacatagtagagcggcaatacacgcaggaccgcacgccgtcctgg
actggcgtcgggtttgtgcgagtcccggagggggcctacttggagttttacatcgacaac
gtcccctactccatggagtatgagatcctggttcgctacgagccgcagttgccggatcag
tgggaaaaagccgttgtgagcgtgtcgcggccaggcaagatccccgcgggtagccgatgt
ggcaacacagttcctgatgatgacactcaggtcgtctcgctctcacccggctccagatac
gtagttcttccccgcccggtgtgctttgaaaagggcctgaattacacgattcgcctggaa
ttgccccagtactcctcggtcgataccgagatggagagcccctacacgcttattgattct
ctcgttctcatgccgtactgtaaatcgctggacatattcacagtgggcggctcaggcgaa
gatgtggtcacgaacagcgcttgggaaactttccaaagataccggtgcctggagaacagc
aggagcgttgtgaaaacccccatgacggatgtctgcaagaacataatcttcagcatttct
gctctcttacatgagaccgcgttgtcgtgccagtgcgaccctcagggctcgctgagctcg
gtgtgtgaccccagcggaggacagtgccagtgccgccccaacgtcgttggcagacagtgc
gaccgctgcgctcccggcacctttggctttggccccaacggatgcaggtcttgcgagtgc
catcttcgaggctcttacaacgccttctgcgacgcggagacaggccagtgccactgcttc
cccggggtgtacgggcggcagtgcgaccgctgcctgcccggcttctggggcttccccagc
tgccagccctgtgttacagaaacaaaaagggtggggggcgtttggtctccggcttggcca
cagccgtggcagtaccagaggagggtggagcggggacagggtcttccctgtgggttggcc
acgtggcacggcctcccgtctcccagagatgcccagatgctggagcacgtgttgcaggac
ccaagaggcttcagagcgggtttctcctttgaaggtttgcgtgtagtcatgacatcgctt
cggcccgtttgcccacatctcctgcatgctgtgtccccctcgcgcaggtgcctggctggc
tactacggagaccctgtcctgggatcaggcgatcactgccgcccttgcccttgccccgat
ggccccgaaagtggacgccagtttgccagcagctgctaccaggatccggtgacgctgcaa
gtcatctgcgtctgtaacgcgggatacgtagggagtcgatgtgacgaatgcgcgtctggc
ttcttcggcagcccggacgaggtcggcggcgcctgccatgcttctatagccacggagcct
cccggtgtgaagcccccttttctgttggaagagatggagctggctgtgcttggggctatt
cgtcgtgaaccaccaccggttggccccgagcgtcagccgcgctcgctgcccagccgggga
gaggtgctgagtttgtttccttcctgtttttggcagttcacggggcagtgccagtgcatg
ccgggcttcggaggccggacctgccgggagtgccaggagctcttctggggcgacccaagc
gtggagtgccgagcctgcgactgcaaccctcgaggcatccagacgccacagtgcgaccgc
gccacggggcagtgcgtctgcaacgagggggtggaagggccgcgctgcgacaagtgcagc
cggggctactccggcttcttccccgactgcgcgccgtgccaccagtgcttcgccctctgg
gacgtggtcatcggcgaactggccaacaggacccagcagttcctggacagggctaacgcc
ctgaaaatcaccggtgtcaccggcccgtaccagcagacgctcaacaccctggaggagaaa
ctcagtgaaattaaaatcatcattgctcaaaacccggccgccgagcccctaaaaaacatc
ggcaccctctttgaggaagcagaaaagctgacagcagatgttacagttaagatagcagac
ttagaagaaagcctttcagcactaggcctgaaaagcaacagcacggacactgacctgagc
gcgctggagactgatgccaaaagcctagagcgggtggtgaaggagctcgcagaacagctg
gagttcatcaagatctctgatgtgcggggagccttggacagtatcaccaagtacttccag
atgtccctggaggcagaagaccgggtcaatgcctccaccgttcaccccgacagcgtggtg
gaagtgtcagcgcaaacacgccaggaggtggaagacttaatcaacgagaaggaggcccag
ttcaaggcgaaacaggaggagcagtcgcgcctgctcgacgaactggcaggcaagctgcaa
agcctggatctctccgaagcggctgagaagacctgcggagctccctcgggagtgtcgtgt
gccgaatccgagtgtggcgggttgaactgccgaacagccgagggacagaagaagtgtgga
ggacctggctgtgacgggctggtgactgtagcgcacaacgcctggcagaaagccatggat
tttgacagagacatcctcagtgccttagcagaagttgagcagctctccaaaatggtttcc
gaggcgaaacagcgagcagatgaagcaaaacaaaacgcacaagaagttctgctcaaaacc
aacgctacaaaagaacaagtggacagaagcaatgaagatctgagaaacctcattaaacag
atcagagacttcctaatgcaagacagcgctgacctggacagcattgaggcagtggctaat
gaagtgctgaacatggagatgccaagcactccccagcagctacatgctctgacagaagat
attcgtgagcgtgtagaaagtctttctgatgtcgaggtcattctgcagcagagtgctgga
gacattgccagagcagaaatgctgttggaagaagccaagaaagcaagcaaaggtgcaaca
gatgttaaagtcactgcagacatggtgaaagcagcactggaagaagctgaaaaagctcaa
aatgcagctgaaaaagccatcaaacaagctgatgaagatattaaaggaactcaagacctg
ctgacctcaattgaatctgaaaatgcagcatccgaagaaacactgaacaacgctacctta
cgcctgtttaagctagagaagagtgttgaagatcttaagcaaaaggctgctacaaattca
gagaacgtggacaatatagaagacacaattggtattgcaaagcaaaatgctgaagaagtt
aaaaaggtcctcaacaacgagctgaacaccaagtataaaactgtggaagatctcattgcc
aaaaagacagaagaatcagctgatgctaggaggaaagctgacatgttgcaagatgaagct
aaagcactgttggctcaagcaaacagcaaactccagctgctcaaagatttggagaacacg
tatgaaaacaaccaaaaagttctggaagacaaagccaagcagttggtagagctggaagag
acagtccgctccctcttacagacaatcagccagaaagttgctgtttatagcacttgctta
taa
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integrated database retrieval system
