KEGG   Struthio camelus australis (South African ostrich): 104138448
Entry
104138448         CDS       T08512                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
scam  Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:scam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:scam04812]
    104138448 (KATNB1)
Cytoskeleton proteins [BR:scam04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104138448 (KATNB1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_HPS5 eIF2A Beta-prop_RIG_1st RMC1_N Beta-prop_WDR19_1st PROPPIN WDR54 VPS8_N Beta-prop_LRRK2 Beta-prop_IP5PC_F Beta-prop_ACSF4 Beta-prop_pof12 WD_LRWD1 Tricorn_2nd Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 104138448
NCBI-ProteinID: XP_009664340
Ensembl: ENSSCUG00000001375
LinkDB
Position
Unknown
AA seq 658 aa
MAVSVTTKTAWKLQEITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKSGSILHGLIRDDKPLVQPTPAGSSLRRIYDRPSASCSKPQSRVKHNSESERRS
PSSEDDRDEKESKAEIQNPEDYKEIFQPKNSISRTPPRNNEPFPAPPEDEPVTVKEAVKP
SQAVDVQTPLPKQEHSDPVQRPPVASSTPVTRTESSVIPAARNEPIGLKASDFLPAVKNQ
SQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcagtgtctgtcaccactaagacagcatggaagctgcaagagatcacagctcacagc
agcaatgtgtcctcactagtcctggggaaaagttcaggccggctgctggcaactggagga
gatgactgtcgggtcaacatatggtcagttaacaagcccaactgcatcatgagcttgaca
ggccatacaacacccattgagagcctacagatcaatacaaacgaggaacttattgttgca
gggtcccagtcagggtccattcgagtttgggacctggaagctgccaaaattcttcgtacg
ttactgggtcacaaagcgaatatctgcagcctcgatttccatccttttggaagctttgtg
gcatctggttctctggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcagatacaagggtcacacacaagctgttcggtgtctccgatttagtcctgatgggaaa
tggttagcctctgctgctgatgatcacactgtaaagctatgggatctggctgctgggaag
ataatgtttgaatttacaggacatactggcccagtaaacgttgttgaattccatcccaat
gaataccttttggcttctggcagctctgacaggactgtccgattctgggacttggagaag
tttcaagttgtgagctgtattgaagaggaggccactccagtcaggtgtgttcttttcaac
cctgatggctgctgcttgtatagtggcttccaggattcactgcgtgtgtacggctgggag
ccagaacgctgttttgatgtggtcttggtgaactggggaaaagtagctgacttatctatc
tgcaacaaccagctgataggagtttcctttgcgcaaagcacagtctcctcttttgttgtg
gatctcagcagagtcacaaaatcaggttccattcttcatgggttgatcagggatgacaag
cctcttgttcagccaacccccgcagggtcttcccttcgccgcatctacgacaggccatca
gctagctgcagcaagccacaaagcagggtgaagcacaactcagagagtgagagacgcagt
cccagcagtgaagatgaccgggatgagaaggaatcaaaagctgagatccagaacccagag
gactacaaagagatcttccagcccaagaactccatctctcgaactcctccacgaaacaat
gagccctttccagcccctcctgaggatgagcctgtaactgtaaaggaagcagtgaagccc
agccaagctgtggatgtccagaccccattgccaaagcaggaacattctgacccagttcag
aggcctccggttgcctcctcaactcctgtgaccagaacagagtcatcagtgattcctgca
gcaaggaacgagcccattggcctgaaggcctctgactttttaccagctgtgaaaaaccaa
agtcagactgagctcgtggatgaggaagccatgtcccagatcaggaaaggccatgagacc
atgtgtgtggtgctcactagccgccacaagaacctggacactgtgcgggctgtatggagc
actggtgacattaagacctctgtggactctgctgtggcaatcaacgatctctctgttgtt
gtggacctcttgaatattgtcaaccagaaagcgtctctctggaagttggatctgtgcact
atagtcctaccacagatagaaaaactactccaaagtaaatatgaaagttatgtacagact
ggctgtacctctttgaaactcattctccagcgattcctgccactgatcacagacatcctt
gctgcaccaccctctgttggggtggacatcaccagagaggaaaggctccataaatgcaag
ctgtgctacaagcagctgaaaaacatcagcaacatcgtcaagaacaagtctgggctcagc
ggccgccatggtagtgccttccgggaactgcatctcctcatggctgtcttggagtga

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