Struthio camelus australis (South African ostrich): 104138449
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Entry
104138449 CDS
T08512
Symbol
CNGB1
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104138449 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104138449 (CNGB1)
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104138449 (CNGB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMF_TATA_bd
DAZAP2
Motif
Other DBs
NCBI-GeneID:
104138449
NCBI-ProteinID:
XP_009664345
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MRMKSPLLQPPCPIADDGADDSFFAEDPPDFADLEGTELSDLEGTFIQVEEKIAEDAEAE
VEGPSQYPTVSIKDVDNPDDALESEDGCLLVPTLSANHTLMVPGAVAASPRRKLQAPEDS
LEEELLALTSQSPVRSLPERIGSATSQNSAVINDRLQELVKLFKERTEKVKEKLTDPDVT
SDDETPVASPSKQAPAEAPPPPPGKEPEAAKVAEDEHYCEMLCCTFKCRPWLDRVRNYQF
PSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWAFSYQKXNIHYWLLVDYLCDLIYLLD
IVVFQIRLQFVRGGDIISDKKAMKENYLKSQRFKMDMMCLLPLDFFYFKVGVNPLLRFPR
CLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHVNSCLYYWASAYEGLGSTTWVY
DGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGA
ATAGQTYYRSCMDSTIKYMNFYKIPRAVQNRVKTWYEYTWHSQGMLDESELLVQLPDKMR
LDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAG
QVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFANLFILDKKDLNEI
LVHYPESQKLLRRKAKKMLKNNNKPKDEKGVPGDSLIIPPKPDTPKLFQAALAAAGKMGG
KGKFAHLRWKLKELKAMQAMQDSSFSPTPPKSPVHRRSPTASPKADPPKGEEIIATSSDN
LVAIRVISAPQEDEEILSAEISEIEEGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaaaagccccctgctccagcctccttgccctattgctgatgacggtgcagat
gacagtttctttgcagaagatccccctgattttgcagaccttgaaggaactgagctaagc
gacctcgaaggcacttttatacaggtggaagagaagatcgctgaagacgctgaagccgag
gttgaagggccaagtcaatacccaaccgttagcatcaaggacgtggacaacccagatgat
gctctcgagagtgaagacgggtgcttgctggtgccaaccctgagcgccaatcacacactg
atggtgcctggtgcggtggcagcctccccaaggaggaagctgcaggccccagaagacagc
ctggaagaggagcttctggccttaacaagccaatctcctgtgagaagcctgcctgaacgc
attggttcagccacaagccagaacagcgcagtcatcaacgaccgactccaggagctggtg
aagctctttaaagagaggactgaaaaggtgaaagaaaagctaacagaccctgatgtcaca
tctgacgatgagacccctgtggcatccccttccaagcaagcccctgcggaagcaccaccg
cctcccccgggaaaggagccagaggcagccaaggtggcagaggatgagcattactgcgag
atgctgtgctgcacattcaagtgtcggccctggctggaccgtgtgagaaactaccagttc
ccaagcagcatagacccactaaccaacctgatgtacgtgctgtggctgttcttcgttgtt
ctggcctggaactggaactgctggctgattcctgtccgctgggccttttcctaccagaag
ncaaacatccactactggctgctcgtggactatctctgtgacctcatctacctcctggac
attgtcgtctttcagatccgtctccagtttgtccgaggaggagacataataagtgataaa
aaggccatgaaagagaactacctgaaatcacagcgctttaagatggatatgatgtgcctc
cttcctctggatttcttctacttcaaagttggggtcaatccgctcctacgtttccctcgc
tgtttgaagtacatggccttctttgagtttaataaccgccttgaggctatcttgagcaag
gcatacatctacagagtgattcggaccactgcctatttactctacagcttgcatgtgaac
tcctgcctctattactgggcatcagcgtacgaaggactgggctctaccacctgggtctat
gatggggaaggaaatagttacatccgctgttattactgggcagtcaaaaccctcatcacc
atcggaggattgccggaccccaagacgctgtttgagatcgtcttccagctgctgaactat
ttcacgggtgtctttgctttctctgtcatgataggccagatgagagatgtggttggcgcc
gctactgcagggcaaacttattatcggagctgcatggacagtactattaaatacatgaac
ttctacaaaatccccagagctgttcagaaccgggtcaaaacgtggtacgagtacacgtgg
cattcccaaggcatgctagatgagtcagagctgttggtgcagctgccagacaagatgagg
ctggatattgcgattgatgtgaactacaacatcgtgagcaaagtggcacttttccagggc
tgtgacaggcagatgatctttgacatgctgaagcggctcaggtcggttgtctacctacct
aacgactacgtgtgtaagaagggagaaatcggtcgcgagatgtacatcatccaggcaggc
caagtgcaggtgctcggaggacctgatggcaaaaccgtgctggtaactctgaaagctgga
tccgtgtttggagaaataagcttgctggcagcaggaggaggaaatcgccgaacagcaaac
gtcgtagctcacggatttgctaatcttttcattttggataagaaggacttgaacgaaatt
ttggtgcattatccagagtctcaaaagttgctgcgtagaaaagctaagaaaatgctgaaa
aacaacaataaacccaaagatgagaaaggagtgccgggtgactcactgatcattcccccg
aaacctgacacgccgaaactcttccaggccgccctggctgctgcagggaagatgggaggc
aaagggaagttcgctcacctccggtggaaactcaaggagctcaaagcaatgcaggccatg
caggattccagtttcagtccaacaccaccaaaatcaccagtacaccggcgatcccccaca
gcctcccccaaagcagaccctccaaagggggaagaaatcatcgcaacatcttcagacaat
ttagtcgctattcgtgtgatttctgccccacaagaggatgaggagatactttctgctgag
atttcagagatagaagaagggaaatga
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