Struthio camelus australis (South African ostrich): 104138921
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Entry
104138921 CDS
T08512
Symbol
RBBP6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scam04121
]
104138921 (RBBP6)
Enzymes [BR:
scam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104138921 (RBBP6)
Ubiquitin system [BR:
scam04121
]
Ubiquitin ligases (E3)
U-box type E3
104138921 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104138921
NCBI-ProteinID:
XP_009665117
Ensembl:
ENSSCUG00000001168
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MTPKSHKILETSFRSRSEPVSGTSKAIDDSSASISLAQLTKTANLAEANASEEDKIKAMM
SQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDKNFESVPRIKKSTGIP
RSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLPEEPSSSSEEDDPIPD
ELLCLICKDIMNDAVVIPCCGNSYCDECIRTALLESEEHTCPTCHQTDVSPDALIANKFL
RQAVNNFKNETGYTKRLRKQIQQQQPPPPPPPPPPPPLIRQTITRNLQPLLRPAISRQQD
PLMIPLAALSSHSAAALSLAPGQSSVAAALPVNPSSAIISDLPPAVSLSLRSEKPDGPFH
DADTVIPPAALVTASELVKSSSVLSISSLMEEKGYQVPVLRQPALQSLLGAQGQSIPTTG
QPMRASTVRSAGSRPGWEPSSNRGRPHSERTQRTQAPTLPASAPVFVPVPPPPLYPPPPH
ALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYAPAPANMSSAWVPTAVPTAHSNTIPT
TQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPY
SASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGKGKSRNYRSRSRS
HGYHRSRSRSPPYRRYHSRSRSPIFRGQSPTKRTVPQGEGEREYFNRYREVPPYDMKAYY
GRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQPRPPVNRENFSPERFGPPGARR
ENSPYARGRREDYAGGQSHRNRNIGGNYPEKPSGREGHGIKDPTKSKEKEVENPLGDGKG
NKHKKHRKRRKGDENEGFPNAELLEGARKPREPVTAEDIKADSLFMLPSRDDATPVRDEP
MEADSIAFKPVSEKEKKEKDKPKAKVDKTKRKTEVAVPPKKDSIIKPTKASQEKVDTDRE
KSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKTLGTPRKVHPKVTKDHPETRPAKEEKGK
KDHPKETKSEKPSNKDEKSKKPVEKSKPSDAKPEKRKRKADEKVDKEHEATSIKASKPEN
AESKTSPKGKTEPDGEKTERTPEKDKSAFLTAPAKKIKLNRETGKKIVSGENVPPVKEPA
EKPEPSSSKVKQEKVKGKVRRKVTAADGSSSTLVDYTSTSSTGGSPVRKSEEKPDTKRTV
IKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTQVPSNVGKPASVVKNV
SAKSVNPVKHNEKEAEPLEKTQKTTKEANYESSQHDAKGSKSSMSNEKGKTKDRDHSLSD
KDTSEKRKSSVQPEKDHSERATEQGNGKSISQSSKDGRSSEKHDIGRGSTAKDFTPNRDK
KSDHDGNRDHSSSKRRDEKSELARRKDSPSRNRESTSGQKSKPRDERAEPPKKSTGDSKR
SGYSPPRDRKQSDHKPAHDSKRSLEEHKHPNKNSXKSNKEKEPGGNKPSLRLGSPDAKNE
KENVTGQNDKSIIKPKPQVSNSSRLSSDLTRETDEAAFVPDYNESDSESNVSAKDEETAG
KNSKEPKEKPVDKVKEETAAPTVDQPDASRSQSQSSPSVSRSRSQSPSESQTRSHSSSAS
SGESQDSKKKKKKKDKKKHKKHKKHKKHKKHTGNESELEKSQKHKHKKKKSKKSKDKEKD
DQKVKSVTI
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgactcctaaatcgcacaaaatcctagaaacttctttcagaagtcgatctgaaccagtg
agtggaacatcaaaagcaattgatgactcttctgcatctatttctctggcccagcttact
aagactgccaatctggctgaagccaatgcttccgaagaagataaaataaaagctatgatg
tcacagtctggccatgaatatgatccgatcaactacatgaagaaacccttgggtccacct
ccaccatcatatacttgctttcgttgtggaaaacctggccattatataaagaactgccca
acaaatggggacaaaaattttgagtctgttcccaggattaaaaagagcactggaattccc
aggagtttcatgatggaggtgaaagatcccaatacaaagggtgctatgcttacaaacact
ggaaaatatgcaataccaactattgatgcggaagcttatgctataggaaagaaggaaaag
cctcctttcttaccagaggaaccatcctcctcctcagaagaagatgatcctattccagat
gagttgttatgtctgatttgcaaagatataatgaacgatgcagttgttattccctgctgt
ggaaacagttattgtgatgaatgtatcagaaccgcactactggaatctgaggaacacact
tgcccgacttgtcatcaaacagatgtttctcctgatgctttaattgccaacaagttttta
cgccaggccgtgaacaacttcaaaaatgaaactggctacacaaaaaggctccgtaagcag
attcagcaacagcagccgccgccgccgccaccaccacctcctccaccaccactaataaga
caaacaataacacgcaacttgcagcctctactcaggccagcgatttccagacagcaggat
ccactaatgattccattagctgccctgtcttctcattctgctgctgcattatcactggct
cctggtcagtcatctgtggcagctgctctaccagtaaatccatcttctgccattatctct
gatcttcctccagcagtgtccctatctctccgctctgaaaagccagatggaccttttcat
gatgctgatactgttatacctcctgctgctcttgtgactgcctctgaacttgttaaatca
tcttccgttctgtcaatcagcagcttgatggaagagaagggctatcaggttcctgtacta
agacaaccagcattacaaagtcttctaggcgcacaaggacaatcaatacccacaactggt
cagccaatgagagccagtacagtacgctcagcaggcagcaggccaggctgggaaccaagt
tcaaatcgaggacgcccgcatagtgaacgtacacaaaggactcaggccccaacactacca
gcatcagcaccagtctttgtgcctgtgcctccacctcccctgtatcctccacctccccat
gcacttcctcttccaccgggggtaccaccaccacagtttcctcctcagtttccacctggt
cagcctccatctgctgggtacactgtcccccctccaggatatgccccagctcctgcaaac
atgtcatcagcttgggtaccaacagcagtaccaacggctcattcaaataccatcccaacg
acacaagcacctcctttatctagggaggagttttacagagagcaacggagacttaaagag
gaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattgatg
gaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccttat
agtgcttcgtcttactctagaagttcatatacctactccaagtcaagatcaggttcttct
cgctcccgctcctactctcggtcgtttagtcgttcccattcacgttcctactcacgatca
cctccgtatccaagaagaggcaaagggaaaagtcgtaactatcgttctaggtcaaggtca
catggttatcaccgctcaaggtcaaggtcaccaccatatagaagataccattcacgatca
aggtctccaatatttagaggccagtctcccaccaaacggactgtacctcaaggggaagga
gaaagggaatattttaacagatacagagaagttccaccatatgatatgaaagcttactac
ggcagatctgttgattttagagatccatttgaaaaggaaagatacagagaatgggaaagg
aactatagagaatggtatgaaaagttttacaagggctatgctgttggagctcaacctcga
cctccagtaaatagagaaaacttctctccagagaggtttggtccgcctggagccagacga
gagaattcaccatatgctcgggggcgtagggaggattatgctggtgggcaaagccataga
aatcgtaacataggtggaaattaccctgaaaaaccttctggaagagagggccatggcatc
aaagatcctacaaaatcaaaagaaaaggaggtggaaaatccactgggagacggcaaggga
aataagcataaaaaacaccgaaagagaagaaaaggcgatgagaatgaaggatttcccaat
gctgagttgttagaaggtgcaagaaaaccgagagaaccggttacagcagaagacatcaaa
gcagactctctgttcatgctcccaagtagagatgatgctacccctgtgagagatgaacct
atggaagcagattctattgcttttaaaccagtatctgaaaaggagaaaaaagagaaagat
aagccaaaagcaaaagttgacaagacaaagcggaagacagaagtagctgttcctcctaag
aaagacagtataataaaaccaactaaagcttcccaggagaaggtagacactgatcgtgaa
aaatctcctcgaacagaacctcctgtgaaaaaagtgaaggaggagttgccaaagacggac
agtgttaaaacgtcctcatctcaaaaggacgagaagactcttggtacaccacggaaagtt
catccaaaagtgacaaaagatcacccagaaaccagaccagccaaggaagaaaagggcaag
aaggaccatccaaaagaaaccaagtcagagaagccttccaacaaagatgaaaagtcaaaa
aaacctgttgaaaaaagcaaaccttctgatgcaaaacctgaaaaaagaaaaagaaaagca
gatgaaaaggttgataaagaacacgaagccacttccataaaggcctctaaaccagaaaat
gctgaatcaaaaacgtcaccaaaggggaagactgagcctgatggtgaaaaaacagagaga
actccagaaaaggataaatctgcttttctgaccgcccctgcaaaaaagattaagctgaac
cgagaaactggcaaaaagattgtgagtggagaaaatgtcccacctgtaaaagaacctgct
gagaaacctgagccaagcagcagcaaagttaaacaagaaaaagtgaaaggaaaagtgaga
agaaaagtaacagcagctgatggatctagttcaactctcgtagattataccagcactagt
tctactggaggaagccctgttagaaagtctgaagaaaagccagatacaaaacgaactgtt
atcaagaccatggaggagtataataatgatataaccgcccctgctgaagacgtcattatt
atgatccaggttcctcaatcaaagtgggataaggatgactttgagtctgaagaggaagac
attaaatctacccaggtaccctcaaacgtaggaaaacctgctagtgttgtaaaaaatgta
agtgctaagtccgtaaaccccgtgaaacacaatgaaaaagaggctgagcctttggaaaaa
acacaaaaaactacaaaagaagcaaattatgaaagctcccagcatgatgcaaaaggttca
aaaagttcgatgtccaatgaaaaagggaaaaccaaagaccgggatcattctttgtcagac
aaggacacttctgagaagagaaagagcagtgttcagccagaaaaagaccactcggaacgc
gctactgaacaaggaaatggaaaaagtatttctcaatcttccaaagacggcagatcttca
gagaaacatgatattgggcgtggatccactgctaaagactttactcctaaccgagacaaa
aaatctgaccatgatggcaacagagatcattctagttccaagcgcagagatgaaaagagt
gagttagcaaggaggaaagactccccttctcgaaacagagaatctacatcaggacagaaa
agtaaaccaagagatgaacgagcagagccacccaaaaagagcactggagattccaaaagg
agtggctacagccctccgcgtgaccgaaagcagtctgatcacaaacctgctcatgattct
aagcgttcattggaagaacacaaacatccaaataaaaattcanaaaagagcaataaagaa
aaagagccaggtggtaataagccctctttgagacttggatcaccagatgcaaaaaatgag
aaagaaaatgtgactgggcaaaatgataaaagcatcatcaagcccaagcctcaggtaagc
aactcctcacggctctcttcagatttaactcgagaaactgatgaggctgcatttgtacca
gactacaatgaaagtgacagtgagagcaatgtatctgcaaaagatgaagaaactgcagga
aaaaattctaaagaaccgaaagaaaagcctgttgataaagtcaaagaggagacagcagca
cctactgttgaccagcctgatgcaagcagaagtcaaagtcaaagcagccccagtgttagc
cgcagtcgtagtcaaagcccttctgagagccagacccgaagccacagcagcagtgctagc
tcaggagagagtcaagacagcaagaaaaagaaaaagaaaaaagataaaaagaagcacaag
aaacacaaaaaacacaagaagcataagaaacacactggaaatgaatcggaattggagaaa
agccaaaaacacaaacacaagaagaagaaatctaagaagagcaaagataaagagaaagat
gaccaaaaagttaaatctgtcacaatatag
DBGET
integrated database retrieval system
