Struthio camelus australis (South African ostrich): 104138931
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Entry
104138931 CDS
T08512
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104138931 (TNRC6A)
03036 Chromosome and associated proteins [BR:
scam03036
]
104138931 (TNRC6A)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104138931 (TNRC6A)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104138931 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104138931
NCBI-ProteinID:
XP_009665126
Ensembl:
ENSSCUG00000001191
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MPPIRDLVSHSPNQSDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSDKEAWPSI
TGSDPELTSECMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNKFVVGSNSN
NVGNGSINGPWGLSHGTLISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNGGLNPSTLN
SNGNHGAWPVLENNGHALKGSVGSGNPGTNIQCSTIGQISNNQSINSKVGGSAHGSWGSL
QENCDSEVNGTRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINELPNNTGHG
AWRVSTMNHSQIQASPVTNGTSISHLSNGEAKSGGSYGTTWGAYGSNYSGDKCSGPNSQA
NGDTVNATLMQPGISGPGSTNFQINGNKGGGVWEAGTVNSQSMPWGNGNGASAGGSRRGW
GNPAQNTGTNISNGEWSKLPSNQHSNESVNGNSRKFTNGWKSTEEDDLNSQSSAASQITE
QNSAWAKTGTGDSEGSTESTGCHEDRATTEGQTRERRKVDQHALLQSIVNRTDLDPRVLS
NSGWGQTPIKQNTAWDTETSPRGERKADNGTEAWGGSVTQTSSSGGCVDRPSPNNNNDTS
SVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWNDAQKIKQ
GWVDGQKASQGWAVSASESWGENSRSNHWGEAKKSSSGGSDSDRSVSGWNEPGKSNSVTW
GGSNTNPNNSSGWDEPAKSNQNQGWGDPPKSNQPQGWGDSSKPINSPEWNKQDVGSWGAP
SATSKPPGSGWLGGPMPTPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNV
NMWNKNVPNSSSSSDQQAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDNGTSAWGK
PMDTGTSWGEPISDAAGTSGWGNASLGQQASNKPGPKSMQDSWCGDDMPLTGSRQTSWEE
EEDVEIGMWNSSSSQEANPSLNWPPYMKKMPAKGIMKGGNKQDETWINPFIKQFTNLSFS
RESPEETIQSNKMDMSGGILQDKRMEMDKHGLNVGDYNRVVGKGPGSRPQISKESSMDRS
PYFDKNGNPSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYA
PNNGGLSPLFGPQQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQNQRSMPSGGRQQQEQ
QGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMKSFLENVIPHATPELQKGP
SPINAFSSFPIGMNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISS
GFRLEESPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYP
NIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYN
VSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQK
PPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCM
QHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQ
GQSLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSP
NYSTSLWGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccattcgggacttggtgagccactcccctaaccagtcagatctgaaccacagt
ggtctaggatcccattatgaaaattctcactggggaccagtctcttcaaatagtgactcc
agcacaaactgggataaagttattgtagacggctctgacaaagaagcatggccatcaatc
actggcagtgacccagagttgacatcagaatgtatggacactgactctgcctctagctct
gggtcagagagaaacctcgttataatggcttcagggagcacaggtggtgaaaatgatggc
attcgaaatggcattggacatggttctcaaaataagtttgtggttggtagcaacagcaat
aatgtgggcaatggaagtattaatgggccatggggtttatcccatggaaccctaataagc
acatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagcaacaatagaatg
aatgcttggggcaccataaactcttcatcaaatggagggttaaatccaagcactttgaat
tcgaatggcaaccatggtgcctggcctgtattggagaacaatggacatgccctgaaaggg
tctgtagggagtggtaatcctggcacaaatattcagtgcagtaccataggtcagatatct
aataatcagagtattaactctaaagtgggtggttcagcccatggttcctggggaagcctt
caggaaaattgtgattctgaagtaaatggtacaaggaaggtttcattcagtgggcaacct
caaaaccttaacactgaaatgaatggaccaaataacactactaactttatgacctctagt
ttaccaaactctgctggttcagtgcagattaacgaactgcctaataatacagggcatggg
gcctggcgcgtgagcacaatgaatcattctcagattcaggcctctccagttacaaatggc
acttccatttctcatcttagcaatggtgaggcgaaaagtggtgggtcttacggtactaca
tggggtgcctatggttctaattactctggagacaaatgttcaggcccaaacagccaagct
aatggtgacactgtgaatgcaactctaatgcagccaggcattagtgggcctggcagcact
aactttcaaatcaatgggaataaaggaggaggggtgtgggaggcagggacagtcaactcc
cagagtatgccatggggaaatggaaatggtgcaagtgctggcggaagtagaagaggatgg
ggcaaccctgcacaaaacactggcactaacatttcaaatggggaatggagtaaactgcct
agtaatcagcattccaatgaaagcgtaaatggaaatagtaggaagtttacaaatggatgg
aaatctactgaagaggatgaccttaacagccagagttctgctgcatctcagataactgag
cagaacagcgcatgggccaaaacaggtacgggggatagcgaaggtagtacggagagcact
ggatgccatgaagatagagcaactacagaaggacagactcgagagagaagaaaagttgac
cagcatgcattactccaaagtatagtgaacagaactgacttagatccacgtgtcctttcc
aactctggttggggacagactccaatcaaacagaacactgcctgggataccgaaacatca
ccaagaggtgaaagaaaagctgacaatgggacagaggcctggggaggctctgtgacacag
acttccagctcagggggatgtgtggatagacctagccctaataataataatgatacctca
tctgtatcagggtggggagatccaaagtctgctacaaggtggggagactccaaagggtca
aacagccaaggggggtgggaagaggattctgctgctacagtaatggtcaagagcaatcaa
tcgtggggaagtggcaaagaggaaaagtcatcttggaacgatgcacagaaaatcaaacag
ggatgggtagatggacaaaaggccagccagggttgggcagtttctgccagtgagagctgg
ggagaaaattcaaggagtaaccattggggtgaggctaagaaatccagttcaggaggtagc
gacagtgacagatcagtatctggttggaatgagccaggtaaatcaaattctgttacttgg
ggaggcagtaacacaaacccaaataactcatccggatgggatgagcctgcaaagtctaat
cagaaccagggctggggagaccctcctaaatccaatcagcctcaaggttggggggattca
tcaaagccaatcaactctccagaatggaacaaacaagatgttggatcttggggagcaccg
tctgccaccagtaaaccgccagggtcaggctggttgggaggaccaatgccaacaccagca
aaggaagaagaacccactggctgggaggagccatcccctgaatcaatacgccgtaagatg
gaaattgatgatggaacttctgcttggggtgatccaagcaaatacaactacaaaaatgtg
aatatgtggaataaaaatgtcccaaacagtagcagcagttcagaccagcaagcacaggta
catcagcagctactgtcttcaagtgccatgtctagcaaggagagcagttctggttctggt
tggggagagccttctactccagccactactgtagataatggaacttcagcgtggggtaaa
cccatggatactggtactagctggggagaacccatcagtgatgcagcaggcacctctggc
tggggaaatgcttctcttggtcaacaggcttcaaataaacctgggcctaaatctatgcaa
gacagctggtgtggagatgatatgccgttgacaggcagtcgtcagaccagctgggaggaa
gaagaggatgtagaaattggaatgtggaatagcagttcctcacaagaagctaacccatct
ttaaattggccaccgtatatgaaaaaaatgcctgcaaagggaataatgaaaggtggaaat
aagcaagatgaaacatggatcaatccattcattaagcaattcacaaatctcagtttttca
agagaatcaccagaggaaaccatacagagcaataagatggacatgtctggagggatattg
caagataagcgtatggagatggataagcatggcctgaatgttggagattacaatcgtgtg
gttggaaaaggccctggttctcgtcctcagatttccaaagagtcttccatggatcgcagt
ccttattttgataagaatggcaatcccagtatgtttggtgttggtaatatagcagcacag
cccaggagcatgcagcagcctccagcacaacctcttaattcatctcagcctaatccacgt
gctcaagtgcctcctccattactgtcccctcaggttccagtatcattactgaagtatgca
ccaaacaacggtggcctgagcccactttttggcccacaacaacaggtagccatgttgaat
caactgtcccagttaaaccagctttctcagatctcccagttacagcggttgttggctcag
cagcaaaaagcgcagaatcaaagaagcatgccttctggtggtcgtcaacagcaggagcag
cagggtcgatctcttagtatgcagcaacagatgatgcaacagtcccgtcagcttgatcca
aacctgttaatgaagcagcaaactccaccctctcaacagcagtcactccatcaacccacc
atgaaatctttccttgagaatgtcataccccatgctactcctgagctacaaaaagggcca
tcaccaataaatgcgttcagcagcttccctataggaatgaactcaaacttgaatgtaaac
atggatatgaacagtattaaagagccacagtctcgactgaggaaatggacaacagtagac
agcatttctgtgaacacatcgttagatcaaaactccagcaaacacggtgctatttcaagt
ggttttaggctggaagagtcgccatttgttccatatgactttatgaacagcagtaattca
ccagccagtcctcctggatctattggggatggctggccccgtgccaaatcgcctaacggc
tctagcagtgttaactggccaccagaatttcgtcctggtgagccatggaaaggttatcca
aacatcgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttca
attaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatct
ttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaat
gtttccctcagcagtacagcacaaagcacttcagtagccagaaacagtgattccaaatca
acatggtctcctggatcagtcactaacacctctctggctcatgagctgtggaaggtccct
ttgccacctaaaagcatcactgctccgtcccgcccacctccagggctaacaggccagaaa
ccacctttatccacttgggataactcccttcgtttgggtggaggatggggaaattctgat
gccagatatacccctggttcaagctggggtgagagcagctcagggagaataacaaattgg
cttgttctaaaaaaccttacacctcagattgatggctcaaccttgcgtactctgtgcatg
cagcacggtccactaataacattccaccttaacctcccacatggtaatgctttggtccgt
tacagttcaaaagaagaggtagtgaaggcacaaaaatctctgcacatgtgtgtattaggg
aacactactattcttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaa
ggccagtctctgactccgtctcctggctggcaatctcttggatccagccagaaccgactt
ggatccattgacggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggt
gctgggctgtcgggaactagcagtggagaccttcatggcacttcactttgggggagcccc
aactattccacgagcctgtggggcaccccgagcagcaatgacaccaggggaattagcagc
ccatcccccatcaacgctttcctttctgttgaccacctaggtggaggtggagagtccatg
taa
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integrated database retrieval system
