Struthio camelus australis (South African ostrich): 104139106
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Entry
104139106 CDS
T08512
Symbol
LAMA1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104139106 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104139106 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104139106 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
104139106
NCBI-ProteinID:
XP_009665417
Ensembl:
ENSSCUG00000005573
LinkDB
All DBs
Position
Unknown
AA seq
3046 aa
AA seq
DB search
MFCKLVEHVPGRPLRNAQCRVCDRNSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWV
TITLDLRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITP
RIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLR
LQRIRTLNADLMTLSHHDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKK
LQCQCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKR
SINIHGQYIGGGVCLNCTQHTTGINCEMCADGYFRPHKVSPYEDHPCYPCGCDPFGSLSP
HCIKDEHHSDTQRGTWPGQCQCREGYAGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPC
TEPCLCKENVEGENCDLCKRGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQASDMTG
WLVTDLYETKSVQPQRGQFDGPHQISINNTEAVKVLKHTYYWSAPEPYLGNKLTAFGGDL
KYTVSYDIPMESVDSDIVSSVDVIIQGNGQTLSTRAAGLSLQPYEEYSNAVRFVSENFID
FNTKKAVDRERLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVE
FCECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCSACQHNTTGP
FCDQCLPGFYGHPSQGTPEDCQPCACPLSSAANNFSPTCLLSEGGEIICDKCLPGYTGSQ
CERCANGYYGNPLVPGQSCVPCECNGNVNPEEDGHCDTVTGQCLKCVGNTGGHHCERCAD
GYYGDAVTEKSCRACECHVNGSLSSTCHHETGFCQCTSNVIGQRCDKCLNGYYGLLTGVG
CVSCNCSQFGSISKDCNDQGQCHCVPGVTGEKCDRCAHGFHAFQDGGCTPCDCAHTQNNC
NADSGQCICPPHTQGPKCEFCEENHWGLYPELGCKACNCSSIGSASLQCDVLTGQCPCKV
EFGGQDCSRCAVGYRDYPDCVACDCDLSGTKTEMCDSAEGLCGCEEDTGICTCKENVFGL
QCSECKPGTFALSASNALGCTPCFCSGISAFCSEAEDHVRIPITLSPDQPILRVVSQSNL
TGTAEGVFFQFPDVLLDAAIVRKHLNTETFYWRLPEQFQGDQLMAYGGKLRYTVAFYALD
GFGTSNFEPQILIKGGHTSKLVIYVDIPSPENGVRSNEEVEMKEDSWKYFNSVSEQPVSR
SDFMSVLSNVEYVLIKAAYGQGLQQSRIANISMEMAVQFEEKHLGRARAHLIEQCRCPVG
YAGFSCQSCAAGYYRGKHTELGVKEHTLKAPCVPCQCNNHSETCDAETGKCLDCRDNTVG
DYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKDVHDYHCDACLPGYEGQYC
ERCSLGYYGDPQVAHGSCQPCQCNPGGSVHVNCDRASGQCLCKPGVTGRLCEECEPRHLL
VENECVSCDDNCTGVLLNNLDNLDKAILSVNLTGVVHVPYGILSELENATKRLKGSIVPR
EDPTYSLATSKETLLSLSGGLDQLHEGSARILKKAWQLNTVTQETRNKSQELTGFIDSVH
TTIKVLAEVALSLNETLGLDLPLSIATSQSLQDDISAMLDTMRRKDFVQQHHNATSMLKA
AERLLLQVQKEYVKPQQELTELEKDAGHFLSKHNSRLQEAQDLMNEALADINETNRLFPL
ISSNLGDLNDKKLYIKEGKEVSTLLIKEGKVLVNVAAALAKDVKNSTSNLEAHQDELVLW
STKLRHHVDELVMQMSMRGVLDLVYRAEDHATQFQRLADTLGSGLSKVRNVTLNATAAVY
THSSIKSVIERTEILADDASRVVNGPLDLPEESFGLLGREALLLSSKFLNEAKNLKKKSD
GLLSGLNGLNKRVEKIRESTNKIVNQLNDSLLTLRALPNDTRKYMLEVKELAVSANTSAV
VGLSRYGDFSQKLLNTTSALSRVNDTLRKTSELITDSSKAASAAEKQVKEVEAQASLLLD
RLKPLKMLEENLSRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLT
LNVKTSEPDNLLFYLGSNGKMDFLAVEMRRGKVALLWDLGSGSARVEYPDFPINNNKWHR
VHATRFGKTGTLSIQEMNSNQEPSSKSGTSPGTASILDVNKSTLMFIGGLGGQIKKSPAV
KVTHFKGCMGEASLNGKSIGLWNYLEREGKCNGCFGSPQDEDTSFHFDGSGYSIVEKALR
STVTQIILFFSTFSPNGLLLYLASNGTRDYLSLELVDGKVRLTVDLGSGPLALTTENRYN
NGTWYKISFSRNKKQGILAVMDAYNLNYKETKQGESPGVASDLNLFSDKDPIFIGGLPRS
RAVRKGLNSRIYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSVNILNNGYIELAPK
SLSPESELMVTFATKNRSGIILAGLSRGLEKRRRRQAHLPFFSIMLIDGHLAVHVNAGDR
ASTRKVILQSANGTYGDGQEHSVILIRNKRIITVQVDEGNPAELKLGSSAEMSPLNISNF
YAGGIPAGEGILGLKMAGSFHGCISNLIFNKELLDFTASMKYEHVDMDSCFLSGKPKPAI
QPEDIEIQPELQALPVPLRPLPDTKKVVCAKDEIPSHVQGAHQFGLAKGSHLTLLFNQST
VRKKLSVQLNLRTFASSGLIYYMAHQNQVDYAALQLHGGQLYFSFDLGKGKAVAFHPAVI
SDGKWHTVKTEYIKRKGMIIVDGKELVAVSALGDGSTLDVEGKLYVGGLPLDYVAKNLGN
VRRLTHSIPACIGSMTINSKQLDKESPVSIFAVNKCYGTVQEGTFFDGSGFAALVKEGYK
VRSDVNITLEFRTTVAHGVLLGISSAKVDAVGLEVVNGKVLFHVNNGAGRITAIYEPQVA
NSLCDGKWHKLQANKSKHRIALIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPADVKQNC
LTSKSSFHGCLRNLILTKGQQAELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9141 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcaagttggtggagcatgtcccaggacggcctctgcgcaacgcccagtgccgt
gtctgtgaccgcaacagtgctaatcccaaagagcagcacccaatttctagtgcgattgat
ggtaccaataattggtggcaaagtcccagcattcagaacgggaggcagtaccactgggtc
accatcaccttggatctcaggcaggtctttcaagttgcctatgtcatcatcaaagctgct
aatgctccacgacctggaaactggattttggaacgctccatcgatggcacagagttcaga
ccatggcagtactatgcaattagcgacacagaatgtttaactcgttataatattacccca
agaattgggcctcctacgtacaagagagacgatgaagtgatctgcacctcctactattcc
agactagttcccctggaacatggagagattcacacgtcgctgatcaatggtaggcctagc
gctgatgatccttcacaaaaacttttggagtttacttctgcacggtacatccgcttacga
ctgcagcgtatcagaaccctaaacgctgaccttatgactctgagccatcacgatcctaaa
gaactagatcccattgttaccagaaggtactactattcaataaaggacatctctgttggt
ggcatgtgtatttgttatggccatgctcgaagctgcccgctggatgaaatcacaaagaaa
ttgcagtgccagtgcgaacacaacacgtgtggagagagctgtaataagtgctgccctggg
taccatcagaaaccatggagaccaggaaccatttctgctgggaacaagtgtgagaagtgc
aactgtcataacaaagcagaagattgctattacaaccagagtattgcagatcagaaaagg
agcataaatattcatggccagtatataggaggtggcgtctgtctaaactgtactcaacat
actactggtatcaactgtgaaatgtgtgctgatggatattttagaccacacaaagtttct
ccctatgaggatcacccttgctacccgtgcggctgtgacccgtttgggtctctgagtcct
cactgcattaaagatgagcaccattctgacacgcagcgcgggacatggccaggtcagtgt
caatgcagagaaggttacgcaggagaaaaatgtgatcgttgtgcgtttggatatcggggc
taccctaactgcctgcgatgtaactgtagcctgattggtagcattaatgaagatccgtgc
acagaaccttgtctttgcaaggaaaacgtagaaggtgaaaactgtgacctctgtaaacga
ggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgtttctgctttggc
gtttctgatgtctgtgacagcctaacatggcccatcagtcaggcatcagatatgacgggg
tggctggttactgatctgtatgagacaaagagtgtgcagcctcagcgaggccagtttgat
ggaccccatcaaataagtatcaacaacactgaggctgtgaaagtactgaaacacacttac
tactggtcagcacctgagccatacctgggaaataaactgacagcttttggtggagacttg
aagtatacggtgtcttacgacattccgatggagagcgtggacagtgatatagtatctagc
gtggacgtcatcattcagggcaatgggcagactttgagtacgagagcagcaggcttgtca
ttgcagccatatgaggagtattctaatgctgtgagatttgtgtcggagaatttcatagac
ttcaatacaaaaaaagctgtggaccgggaaaggttgatgactgttctagtaaacgtaacc
catcttctgatcagggccaactacaatattgccaaaaaagctgtgtacaggctggactct
gtgaccttggatactgcaagtgccaatgttatagacctttcttcagcaccagatgtggaa
ttctgtgaatgtcctcaaggttacacaggcatatcctgtgagtcctgtctccctgggtac
taccgtgtggatggaatactctttggaggtatttgtcaaccctgcaaatgcaacgggcat
gcaactgaatgtgatattcatggtgtttgctctgcttgtcagcacaacacaacaggacct
ttctgtgatcagtgcttgcctggcttctacggacatccatctcaaggaactcctgaggac
tgccagccctgtgcctgccctctgagctctgctgcaaacaatttcagtcctacttgcctg
ctgagtgaaggaggtgaaattatctgtgacaaatgtcttccaggctatactggttctcaa
tgtgaaagatgtgctaatggttactatgggaatccactggtgcctgggcagtcgtgtgtt
ccctgtgaatgcaatggcaatgtgaaccctgaagaggatggccactgtgatactgtcaca
ggacagtgcctgaagtgcgtggggaacactgggggtcaccactgtgaaaggtgtgctgat
gggtattatggggatgcagtgactgagaaaagctgtcgtgcctgtgagtgccatgtgaat
ggttccctttccagtacttgtcatcatgagacgggcttctgtcagtgcacgtcaaacgtt
attgggcaaagatgtgataagtgcttgaatggttattatggcctgcttactggagttggc
tgtgtttcctgcaactgcagtcaatttggctcaatctccaaggattgcaatgatcagggg
cagtgccactgtgtaccgggagtgactggagaaaagtgtgatcgctgtgctcatggcttc
cacgcgttccaggacggtggctgcacaccttgtgactgtgctcatactcagaacaactgt
aatgcagattctggtcaatgcatttgcccccctcacactcagggaccaaaatgcgaattt
tgtgaggaaaatcactggggactctatcctgagcttggctgcaaggcttgcaactgtagc
agcattggttcagccagtctccagtgtgatgtgttgactggtcagtgcccatgcaaagtt
gagtttggaggacaagactgttccaggtgtgcagtaggctacagggactatccagactgc
gttgcctgtgactgtgacttgagtggaaccaaaacggagatgtgtgatagtgctgaagga
ctctgtggttgcgaggaagatactggcatctgtacctgcaaggaaaacgtatttgggctg
cagtgcagtgagtgcaaacctggaacttttgctctatcggctagcaacgcgctggggtgt
actccgtgcttctgttccgggatatccgcgttttgttcggaagcagaagaccatgtgaga
attcctataaccctaagtccagatcagcccattctgcgtgtagtatctcaaagtaacctg
actggaacagcggaaggtgtattttttcaatttcctgatgttttactggatgctgccatt
gttagaaaacatttaaatacagaaacattttactggaggttaccagagcagtttcaggga
gaccagctcatggcctatggaggaaagctgagatacactgttgcattttatgccttggat
ggctttggaacctcaaatttcgagccacagattctaatcaaagggggtcacaccagtaaa
ttggtcatttatgtagacatcccttctccagaaaatggagtcagaagtaatgaggaagta
gaaatgaaggaggattcttggaaatattttaactccgtgtctgagcagcctgtctcacgc
tctgacttcatgtctgtgctaagcaatgttgaatacgtccttatcaaggccgcctatggc
caaggattacagcaaagcagaattgcaaacatctcaatggaaatggcagtgcagtttgaa
gaaaagcatctaggcagagctagagctcatcttatagagcaatgtagatgtcctgttggt
tatgctggcttctcctgtcagagctgtgctgcaggatactacagggggaaacatacagaa
ctcggtgtgaaggagcacactctgaaagcaccttgcgtgccgtgtcagtgcaacaaccac
agtgaaacctgtgatgcggaaactggaaagtgcttggactgcagagataacacagttggt
gattactgcagcgcttgtgccccaggctactatgggaaagtaattggatctgtcaacgac
tgctctctctgtgcctgtcccagagccaaccctgttagttttagtcccacttgtgtcctg
aaagacgttcacgattaccattgtgatgcttgtctcccaggatatgaaggacagtactgt
gaaaggtgctccctggggtattacggtgaccctcaggtcgcccacggcagctgccagccg
tgtcagtgcaatccaggcggttctgttcacgttaactgtgaccgtgccagcggccagtgc
ctctgtaagccaggtgtgacagggcggctctgcgaggagtgtgaaccgagacatcttctg
gtggaaaacgagtgtgtctcttgtgatgacaactgcacaggtgttttgttaaacaatttg
gataatctcgacaaagcaatactttcagtgaacctcactggtgttgtccatgtgccctat
gggatattgtcagagttggagaatgccacgaaacgtctgaaggggtctatagttcctaga
gaagatccgacttactcattagctacatcaaaagaaactctgttgagtttatcaggaggc
cttgatcagctgcatgaagggtcggctagaattttgaaaaaagcttggcaacttaacaca
gtgactcaggaaaccaggaataaaagtcaagaactgactggatttattgactcagtgcat
acaaccatcaaagtacttgctgaagtggctctgtcgctaaatgaaacactgggtctggat
cttccgctgtcaattgctacgtctcagagcctgcaggatgatatctctgccatgctggat
acaatgcgcaggaaagattttgttcaacagcaccacaatgctacaagcatgctaaaagct
gcagagaggttgttgctccaggttcagaaagagtatgttaaaccccagcaggaacttact
gagctagaaaaggatgcaggccatttcttatcaaagcacaacagcagactgcaagaagcc
caggacctgatgaatgaggcgcttgctgacatcaatgagaccaaccgcttgtttcctctt
atctctagcaacctgggagacttaaatgacaaaaagctctatataaaagaaggtaaagaa
gtctccaccttgctcattaaagaagggaaagtcctagtgaacgttgctgctgctcttgcc
aaagatgtaaagaactctacatctaacctggaggctcaccaagacgagctggtcctatgg
agtaccaaactgcggcaccacgttgacgagctggtcatgcagatgtccatgcgaggagtg
ctggacctggtgtaccgagccgaggaccacgccacccagttccaaaggcttgccgatacg
ctaggaagtggcctctctaaagtaagaaatgtgactttgaatgcaaccgctgcggtctac
acccactccagtattaaaagtgtgattgaaagaacagagattttggcagatgatgcttct
agagttgtgaatggccccttggacttaccagaggagtctttcggtcttcttggaagagaa
gctctactgcttagctccaaatttctgaatgaagctaaaaatctgaagaaaaaaagtgat
ggccttttatctggattgaatggattaaacaaaagggtagaaaagattcgggaaagtact
aataaaattgtcaaccagcttaatgattccctgttgacactaagagcattgcctaatgat
acaaggaagtacatgcttgaggtgaaagagctggctgtgtctgcaaacaccagcgctgtg
gtgggtttaagccgctacggggatttcagtcaaaagctgctgaatactacttctgcgttg
tcccgagttaatgacacgttgaggaaaactagtgaacttataactgattcgtcaaaagcc
gcatccgcagctgaaaaacaagttaaagaggtcgaagcacaagccagccttttactcgat
aggctgaaacctctgaaaatgctagaagagaacctgagcagaaatctctctgaaattaaa
gagctcatcagccaggcccgcaagcaggcagcatctattaaagttgcagtatcagcagac
agagactgcattcgtgcctaccaacctcagatttcatctacgaattacaacaccttaacc
ctcaatgtgaaaacttctgaaccagataaccttcttttctacctgggtagcaatggaaag
atggactttcttgcagtggagatgcgacgtggtaaggtagctcttctttgggatttgggc
tctggatcagcaagagtggaatatcctgattttccaattaacaacaacaaatggcacagg
gtacatgcaaccaggtttggaaaaacaggtaccctgagtatacaggaaatgaactccaat
caggaaccttcatctaaatctggaacctcacctgggacagctagcatactggatgttaac
aaatcaacactaatgtttatcggaggacttggagggcaaatcaagaagtcgcctgctgtt
aaggtgacccattttaaagggtgcatgggagaggcatcgctgaatggcaaatctatcggt
ctttggaactacttggaaagagagggcaagtgcaatggatgttttggaagcccacaggat
gaggacacttcattccattttgatggcagcggatactcaattgtggagaaggcactacgc
tcaacagtgactcaaataatactgtttttcagcaccttctcacctaatgggctcctgctg
tatcttgcttcaaatggcactagagattacttgtcacttgaacttgtggatggcaaagtg
agactgactgttgatctaggttcaggaccccttgctcttacaacagaaaatcgttacaac
aacggaacatggtataaaatttcattcagtcggaacaagaaacaaggaattttggcagtc
atggatgcgtacaaccttaattacaaagaaaccaagcaaggagaatctcctggagttgcc
tcagacctgaaccttttttctgataaggacccaatttttattggcggactgccaagatca
agggccgtgaggaaaggtcttaatagcagaatatatgtgggatgcatcaagaatctggaa
atatcccgttcaacgtttgacttgcttagaaattcatatggtgtaagaaaaggctgtgta
ctggagcctattcgaagtgtgaacatcttgaacaatggatatattgagttggcacctaag
tccctaagtccagaatcagaactgatggtgactttcgctacaaagaacaggagcggtatc
atcttagctggactcagcagggggctggagaagcgacgacgcagacaagcacacttgccc
ttcttttccatcatgctgattgatggtcatcttgcagtgcatgttaatgctggagataga
gcaagtactagaaaagtgattcttcagtcggctaatggaacatacggtgatggacaagaa
cactctgtcatcctaatccgaaataagaggatcataacagtacaggtggatgaaggtaac
cctgcagagctgaagcttggttcatcagcagaaatgagccccctgaatatttccaacttc
tacgctggtggcattccagcaggagagggcatcttagggctaaaaatggctggttccttt
catggctgtatcagcaatctcatttttaacaaagagcttttggatttcaccgcttccatg
aagtatgagcatgtggatatggacagctgctttctgtcagggaagcctaagccagccata
cagccagaagacattgagattcaacctgaacttcaggctttgccggttcccctgaggcct
cttccagatacaaaaaaagtagtttgtgcaaaagatgagatacctagtcatgttcaaggt
gcccatcagtttggacttgccaaaggcagccacttaacactgctcttcaatcagtctact
gtaagaaagaaactttcagtccagctgaatctcagaacctttgcctccagtgggctgatt
tactacatggctcaccagaaccaggttgactatgcagccctacagcttcacgggggacag
ctctatttctcatttgatttaggcaaaggaaaagcagtagcttttcatcctgctgttatc
agtgatggaaaatggcatacggtaaagacagaatacattaaaagaaaaggtatgatcatt
gtggatggaaaggaattagtagcagtcagtgctctgggcgatggtagtactttggatgtg
gagggaaagctctacgtaggaggactccccctggactatgtggcaaagaatcttgggaat
gtaagaaggttgactcatagcatccctgcctgcattggcagcatgacaattaacagcaag
caactggacaaggagagccctgtctccatctttgctgtgaataaatgctatgggacagtg
caggaaggcactttctttgatgggagtggctttgctgctcttgtcaaagaaggttacaaa
gtgcggtctgatgtgaatatcacacttgagtttcgtaccactgtggcgcatggcgttctc
cttgggatcagcagtgctaaagtcgatgccgtgggactggaggttgtaaatggcaaggtt
ttattccatgttaacaatggagctggcagaataacagccatatacgaaccacaagttgca
aatagcttgtgtgatggaaaatggcacaagcttcaggcaaacaaaagcaaacatcgtatt
gcgctgataattgatgggaatttggttcaaactgataatccctacatccagtcaacatct
gcagatacaaacaaccccatttatgttggaggctatcctgctgatgtgaagcaaaactgt
ctgacaagcaagagctcgttccacggctgcttgaggaacctcatactgaccaagggccag
caggcagagttgtttgacttcagcagagcttttgacctgcgtggagtctttcctcattcc
tgccctggggctgagcactga
DBGET
integrated database retrieval system