Struthio camelus australis (South African ostrich): 104139121
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Entry
104139121 CDS
T08512
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104139121 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104139121 (TAF4B)
03036 Chromosome and associated proteins [BR:
scam03036
]
104139121 (TAF4B)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104139121 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
104139121 (TAF4B)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104139121 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
104139121
NCBI-ProteinID:
XP_009665438
Ensembl:
ENSSCUG00000005222
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MRREYCQPAAAAASVTTVTAVKPLSTGTPVKLPVTGPPAQLISQKAASVKAEGTAVAQTN
TSAEMLENVKKCKNFLATLIKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIE
LKSSPQPYLVPFLKKSMLALRQLMPNAQSFIQQCMQQPAPTQEAVSTCTSAVPTPSVTAA
ASAVATTSLPTIKSVSTSATVTASPVIKPVFSSASVTASLQAVKPILAPAVVTASLRPAS
PVLTTTVATSGLTAIQTVKPVFTSAVATSTLQPVKPVLVSTVATSAPTPLQPLKPVIGTP
ISIKISQPNSIVAQSVGTQQVVKVKQLVVQQPSGTVVKQVSTLPQPSTLTLQTSSEKRMP
LNTLVQTNQFPAGSILKQITLPGNKILSLQASPLQKNKIKENGTTSFSKDDDDINDVTSM
AGVNLNEENACILATNSELVGTVMRSCADEPFLSSEALQKMILNIGKRHDIMELNSDVVN
LISHATQERLRGLLEKLTVIAQHRVSTHKGSDKYIISSDTRAQLRFLEKLDHLEKQRKDE
EEREILLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKRPL
DSSNIGLEGLNGNGITPGSSGFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLALYRA
LLK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagagtactgtcaaccagcagctgcagcagctagtgttactacagttactgct
gtaaagcctttgagtactggaacacctgtaaaacttccagttacaggaccacctgcacaa
ttgatctcccagaaggcagcctctgtgaaagcagagggcacagcagtagcacagaccaac
acttctgcagaaatgttagagaatgtgaaaaaatgtaagaattttcttgctacgctaata
aaactggcatctagtggacctcaagcccctgaaatggggcagaatgtgaagaatctggtg
caaaatctattggaagccaaaattgaaccagaagaatttacaaaaaagctatatatagag
ctgaagtcttctccacaaccatatttagttccttttctcaagaaaagcatgcttgcctta
cggcagctaatgcccaatgctcagagctttatccagcagtgtatgcagcagccagctcca
acccaagaagctgtttcaacttgtacctctgcagtgccaactccttctgtaacggcggca
gcctcagcagtagcaacaacttctcttccaactataaaatcagtgtccacctctgcaaca
gtcacagcctctccggttataaaaccagtcttttctagtgcgtcagtgacagcctctctg
caagctgtgaaacccattcttgcccctgcagtggtgacagcctctcttcggcctgcaagt
ccagtcctcaccacaacagtagcaacgtcagggctcactgctatccagactgtaaagcca
gtcttcacctctgcagtagcaacatcaactcttcaacctgtgaagccggtactggtctca
acagtggcaacttctgcaccaacccctctgcagcctttgaaaccagtcattggaacccca
atcagtattaaaatctcacagccgaactccattgttgcgcagtcagttggtactcagcag
gtggttaaagtgaagcagttggtagtccagcaaccatcaggaaccgttgtaaaacaagta
tccacgctcccacaaccctcaacactgaccttgcagacatcttctgaaaaaaggatgcca
ctgaatacacttgttcaaactaaccagtttcctgcaggttccattctgaaacaaattacc
ctgccaggaaataaaattctgtcacttcaagcatctcctcttcagaaaaataaaataaaa
gagaatggaacaacttccttcagtaaagatgacgatgatatcaatgatgtgacttctatg
gctggggtcaatcttaatgaggagaatgcatgcattttggcaacaaattctgaactcgtt
ggtacagtgatgcgttcatgtgcagatgaaccttttctctcctcagaagctcttcagaag
atgatcttgaacataggtaaaaggcatgacattatggaacttaactctgatgttgtgaac
ttgatctcccatgctacacaggagagattacgagggcttctagaaaagctaactgtaatt
gctcagcacagagtatcaacccataaggggagtgataagtacatcatatctagtgacact
agagcacagctgagatttctggaaaagcttgatcacctggaaaagcaaagaaaggatgaa
gaggaacgtgaaatattgctacgagcagctaagagtcgctccaataaagaagatccagag
caactacgtttaaagcagaaagcaaaagagatgcaacagttggagttagcacaaatgcaa
cagagagaagctaacctcacagctttggcagccattggaccgaggaagaaaagacctttg
gattcatcgaacattgggctggagggtttgaatggcaatggaatcactcctggatcatcg
ggttttagccttacaaaacagttgcttcgtccaagaataacccgtgtctgtctcagggac
ttgatattctgcatggaacaagaaagggagatgaagcattctctagccttgtaccgtgct
cttttgaagtga
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