Struthio camelus australis (South African ostrich): 104139374
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Entry
104139374 CDS
T08512
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104139374 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104139374 (SMG5)
03032 DNA replication proteins [BR:
scam03032
]
104139374 (SMG5)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104139374 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
104139374 (SMG5)
DNA replication proteins [BR:
scam03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104139374 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
104139374
NCBI-ProteinID:
XP_009665780
Ensembl:
ENSSCUG00000003808
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MWGIQRKRELEREIMALAAHREGTGRGGEEGPGGLGKETCFASKELASETISYVTITCHS
ETLLSVLPCRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKLRELCVKLMFLHPVDYG
RKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLIAGIGFYQHLLLYIQSHYQL
ELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTEL
LAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRL
YDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQS
VLEDFNLCLFYLPSPPNLNSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRAGSK
QYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDDQEPREPLNSIEKEAE
ADLANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSTKGSD
GSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKSGPKEALKNC
VDGSALGDSKIPSISKIETPDPATNGPGSLSTNDASIASNLQAMSTQLFQTKRCFRLAPT
FSNILLKPNSEPPVLKDGVDSKPCVNGDLEKPNLAEQDDVSDSEESVSSNKSCRNERSLQ
EKLEIMTNEGLLPTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESG
LALCNEVKDMLSSSELPDLSSNLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVEESV
VRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNR
LMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLATSGRFIII
IPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAW
NLYKILDSCKQLTVSQASGEDDTTGMVTIITGFQLEDPSVFSVPMQSAIQAAANASVEIK
NVLEFYKQWKEMG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaattcagagaaagagggagttggagagggaaatcatggcactggcagcgcac
agggaaggcacaggaaggggtggagaagagggtccgggtggtttggggaaggagacttgc
ttcgcgagtaaggagctggcatctgaaaccatcagttacgttacaataacctgccattct
gaaactcttctttcggtgttaccttgcagagcagtggtagaggctgttcatcgactggat
ctcatccttggtaataaggcagcgtatcaagaagtgttcaagccagagaacatcagcttg
aggaacaagctgcgggagctgtgtgtgaagctgatgttcttgcatccagtggattatggg
agaaaagcagaagaattgctctggagaaaagtttattatgaagttatccagctcattaaa
acaaataaaaagcacattcacagccgtagtactctggagtgtgcataccggactcactta
atcgctggcataggattttaccaacaccttctcctctacattcagtctcactatcagctg
gagctgcagtgctgtattgactggactcatgtaacagaccctctcataggctgcaagaaa
cctgtgtctgcatcagagaaggagatggagtgggcacagatggcatgtcacagatgtctg
gtttatctgggagatctagctcgctatcagaatgagctggcaggtgtggacacagagttg
ctggcggagcgattttactatcaagccctttctgttgcaccacaaattggcatgcccttt
aaccagctggggacattggcggggagcaaatattacaatgtggaagctacctattgctac
ttacgctgtatccagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcggctg
tacgacaaagcagccaaaatgtatcaccagttgaagaaatgtgaaaccaggaagttgtct
ccaagcaagaaacgatgtaaagacattaagaggttgctggtgagctttatgtacctgcag
agccttttgcagccgaagagcagctctctagattctgagctgacatctctctgccagtct
gtgctggaggatttcaacctgtgcttgttctacctgccttctcctcctaatctgaactca
actagtgaagatgaagaagagtatgagagtggctactccttccttcctgatctcctgatc
ttccgcatggtgatcatctgccttatgagtgttcacagcctcaagagggcaggttcaaag
cagtacagtgcagccattgctttcacgctggccctcttctcacatctgataaaccacgtc
aatattcgcctacaggcagagctagaagaaggggaaaatccagtcccagcctttcagagc
gatggcacagatgaccaggagccacgggagcccttgaactccatcgagaaggaagccgaa
gctgacttggccaatcaccagcccagtgaggagcaacggaagaacgactgcaagaaaagc
aagaaatactcccgcctctcttgtctgcgtcgccgccgccacccccagaaggtggacgag
agtgacctgagcgagggctttgactctgactccagccagggctccacaaagggcagcgat
ggctcagaaagtggctcggagaagagcgatgaggaggcagaagctgcttttgatgtggag
acagactctgacatgaacagccaggaatctcgttctgacttggaggacatggaggacgag
ccgggtgaggagggaagtggccgaggcaaaagtgggcctaaagaggccttaaaaaactgt
gtggatggcagtgcgctgggggactctaagatcccaagcatctctaaaatcgagactcca
gatccagcaaccaatgggccagggtccctgagcactaatgatgcaagcatagccagtaat
ctccaggcaatgtctacccagctgtttcagaccaaacgctgctttcgcttggctcccact
ttcagcaacatccttttgaaaccaaacagcgagccgcctgtcttgaaggatggagtagac
agcaagccgtgtgtcaatggagatctggagaagcccaatttggcagagcaagacgatgtg
tccgactctgaagaaagcgtttcaagcaacaaatcctgcaggaacgagcgatcccttcag
gagaagctagagatcatgaccaacgaggggttgcttcccactgtcaaggtgttcctggac
tggctgaggacaaacacggacctcatcatcatgtgcgcgcagagctctcagagcctgtgg
aacaggctgtctgtgctcctgaaccttctgccttctgctgccgacctgcaggaatcaggg
ctggccctatgtaatgaagtcaaggacatgctgagcagctctgaactcccagacctgagc
tccaacttgctgctccccgaagatgtggccctgcgcaatctgccccctctgaaaaacgca
cacaagaggtttaactttgagcaggaccgacccattttctcagcagtggaggagtctgtt
gttcggatttgctgcattcgaagctttggccacttcattacccacttgcaaggcagcatc
ctgcagttcaattcggagcttgggatcttcatcagcatagctcagtcggagcaagacaac
ctgctgcaccaggcccaagcccagtttcacatggctgcagaggaagctcgtcggaacagg
ctaatgagagacatggctcagcttcgactgcagctggaggtttctcagctggagggaagt
ctccagcagcccaaagcccagtcagctatgtctccttatcttgtcccggacacccaggcc
ctctgccagcacctggctgttgtcaagcagctggccactagcgggcggttcataatcatc
attcctcgaacagtgattgatggcttagacttcctgaaaaaggagaacgcaggtgctcgg
gacagcatccgatatctggaggcagaatttaaaaagggaaacaggtacattcgttgccag
aaagatgttgggaagagctttgagaggcataagttgaagagacaagatttagacgcctgg
aacctctataaaatactggacagctgcaagcagctgacagtgtcccaagcaagcggagag
gacgacaccacaggaatggtcaccatcatcacgggctttcagctggaggacccgagcgtg
ttctcggtgcccatgcagtctgccatccaggcagccgccaatgccagcgtagaaataaaa
aatgttctggagttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
