Struthio camelus australis (South African ostrich): 104139609
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Entry
104139609 CDS
T08512
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104139609 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scam04812
]
104139609 (CLASP1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104139609 (CLASP1)
Cytoskeleton proteins [BR:
scam04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104139609 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
HEAT_2
Sec7-like_HUS
HEAT_DAAF5
RTP1_C1
ParcG
MMS19_C
MMS19_N
TAN
TPR_20
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
104139609
NCBI-ProteinID:
XP_009666134
Ensembl:
ENSSCUG00000004979
LinkDB
All DBs
Position
Unknown
AA seq
1577 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGMDILSALVSRLQDRFKAQIGTVLPSLLDRLGDSKDLVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSSDKN
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTARRLGSAALGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHGHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSGASTPFSSAAALPPGSYASLDGTTTKTEGRIRTRRQSSGSATSV
TSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSAYGGLSSGTSRVQPVPS
SSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPP
LASRRHSRSTSALSTADSVGQSDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADALLLG
DSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNH
CASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVD
FIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFI
VDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAA
QIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRH
SSSRTSPLTSPTNCSHGGLSPSRFWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYSP
SMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGLAV
PASDVRGGSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYSDTINTYDKTALK
EAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWE
EHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHK
EVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQL
LPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRA
QTTNSNSSSSSDVSTHS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtattgcttagcgcaggtgctgcagaaagatgttggaaagagg
cttcaagttggccaggaactgatagattacttctcagataaacagaagtcagctgatctt
gaacacgatcagactatgttggacaaaatggttgatggactggccacatcttgggtaaat
tccagtaactataaggtggttctcctgggcatggacatcctttctgcactggtgtcacgc
ttgcaagatcgcttcaaggcacagattggcacagtgctgccgagtttacttgataggctg
ggagactctaaagacttagtgcgggagcaggatcagaccttgctgctgaaaattatggaa
caagctgctaatcctcagtacgtgtgggatagaatgctaggaggattcaaacacaagaat
ttccggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacactgagtaagatagtgccacatatatgtaacttacttggagatccgaac
agccaggttcgagatgcagcaataaacagccttgtggaaatttacagacatgttggtgaa
cgtgtaagggctgatctcagtaaaaaaggactgccccagtctcggttgaatgtaattttt
acaaaattcgacgaagtccaaaaatctggaaacatgatccagagctcaagtgataaaaat
tttgatgatgaagactccgtggacgggaacagaccttcctcagctagctcctctacatcc
tcaaaggcccccgcaaattcacgcagagttgggatggggactgcccgcagacttgggtct
gcagctctgggctcgaagtcttcaacagccaaagagggagcaggtgctgtggatgaggaa
gacttcattaaagcatttgaggatgtcccaacagttcagatctattccagccgagatctt
gaggaatccattaacaaaataagagagatactgtcggatgataagcatgactgggagcag
agagtatctgctctgaagaagatccgctccttactcttggctggagctgcagaatatgac
aacttcttccaacacttacgacttctggatggagcgtttaaattatccgctaaagacctg
cgatctcaggtagtgcgtgaggcttgtatcacattgggacatttgtcatcggttttggga
aacaagtttgaccatggggcagaagccatcatgccaacgatttttaatctaattcccaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacatacg
cacatccctcgactaatacccatcataaccagtaattgtacctccaagtctgttgccgtt
agaaggcgctgttttgaatttttagacttgctgttgcaggaatggcagactcattcccta
gaaagacacatatcagtgttagctgaaacgataaagaagggaatccacgatgcggactct
gaagccaggatagaggcaagaaaatgttactggggttttcatggtcacttcagccgagag
gcagaacacttgtatcacaccctggaatcctcctaccagaaggccctgcagtcccatttg
aagaactctgacagcattgtgtccttgccgcagtcggatcgctcctcttctagctcccag
gagagtctcaaccgtccactgtctgctaaaagaagtcctactggaagcactgcatctaga
gcatctacagtaagtacgaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgttgatgtgaatgcagcagctagtgccaagtcaaaagtgacatctggagcatctacc
cccttcagttctgccgcagccttgcccccaggctcatatgcatccctagatggtactacc
actaaaactgagggtcggattcgtacaaggagacagagctctggcagtgccacaagcgtc
acctcaacgcctgctgacacccgaggccgcagccgggctaaagtagtttcacagtcccag
cgatccagatcagctaatcctgctggtgctggcagccggtctagttctccgggtaaactg
ttaggaagcgcctatggcggcctgagcagtggaacgtccagagtccagccagttccatca
tcgtcagaaaaacgcagcaagatccctcggagccagggatgcagtcgagagacgagtccc
aacaggataggactagcacggagcagtcgcatcccccgacccagcatgagtcaggggtgc
agccgcgataccagccgtgagagcagtcgagatacaagccctgctcggggctttcctcca
cttgcttctcgacgtcattccaggtccactagtgctctctccactgctgattctgttggg
cagtcagaccggtttgggctcggacagccaggcaggatgcctgcttccgtgaatgccatg
cgagtcctgagcacaagcacagatctggaggctgccgtggccgatgcactgctgttagga
gactccaggagcaagaaaaagcctgtgagaagaagatatgaaccctatgggatgtactcc
gatgatgatgctaatagtgatgcatcaagcgcttgctctgagcgctcttatggctccagg
aacgggggcattccacactacctgcgacagactgaagatgtagccgaggtcttgaaccac
tgtgccagctccaactggtctgaaagaaaagaagggctcataggtcttcagaacttactg
aaaagccagcggacactgagccgagtcgagttaaaaaggctgtgcgaaatatttactcgc
atgtttgctgaccctcacagcaagagagtcttcagcatgtttctggaaaccctggttgat
ttcatcatcattcataaagatgacttgcaggactggctttttgttctcctgacacagttg
ctaaagaaaatgggagcagatttgctggggtctgtacaggcaaaagttcagaaagctctg
gatgtcacaagggattcttttccatttgatcaacaatttaacattttgatgaggtttatt
gtagatcagacccaaacaccaaacctcaaggtgaaagttgctatcctgaagtatattgag
tccctggcaagacagatggatccaacagactttgtgaactccagtgagacaagacttgct
gtatctagaattataacttggacaacagaaccaaagagctcagacgtgagaaaggcagca
caaatagtcctgatttctctctttgaattgaacacgcctgagtttaccatgttactcggt
gccttgccaaaaacattccaggacggtgctaccaagctcctgcacaaccacctcaagaac
tccagtaacaccagtgtgggttcccccagcaatacccttggtcggactccttcccggcac
tccagcagcagaactagccccttaacttcaccaaccaactgttcccatggtggactgtct
ccaagtcggttctggggttggagtgcagacgggctgtcgaagcacccccctcccctttct
cagcctaactccatccccactgctccttcccacaagactttcagacgctcttactctccc
agtatgctggattatgacacggagaacctaaattctgatgaaatctacagctctcttcgt
ggagtcacagaagcaattgaaaaatttagtttccgtagtcaagaggacctgaatgagcca
atcaaacgtgatggaaagaaagactgtgacattgtgtctcgagatggtggcctcgcggtg
cctgccagtgatgtccgcggcggcagtgacattgtggaagggggcaggatggctctagat
aacaaaacctcccttcttaacacccagcctccccgcgccttttcaggaccccgtgctcga
gagtacaacccctacccttattccgacacgattaacacttatgacaagactgccctgaag
gaggcagtgtttgatgatgacatggatcagcttcgggatgaagtacccattgaccattct
gatttggtggctgatcttctgaaagagctctctaaccacaatgagcgagtggaggagcgg
aaaggagccctcctggaactgctgaagatcacgcgggaagataatcttggagtctgggag
gagcatttcaaaactattctgctcttgttgctggaaacacttggagacaaagatcattcg
ataagagccctggcactaagagtcctgagggagatcttacggaatcagccagccaggttc
aagaactatgctgagttgaccatcatgaaaacactggaagcacataaggattcccacaag
gaggtcgtcagagctgctgaggaagctgcttctaccctggctagttccatccacccggag
cagtgcatcaaagtgctttgccccatcattcaaactgcagattatccaattaacttagct
gccatcaaaatgcagacaaaagtcattgagaggatttctaaggaatcgttgcatcagctc
cttcctgatattattcctggattgttacagggttatgataatacggagagcagtgtccgt
aaagctagtgtgttttgcctagtggcaatttattcggtaattggagaagaactgaaacct
catctcgcacaactcacgggaagcaagatgaagctactaaacttgtacataaagagggcc
cagactaccaatagcaacagcagttcctcttcagatgtttcaacgcacagttaa
DBGET
integrated database retrieval system
