Struthio camelus australis (South African ostrich): 104139715
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Entry
104139715 CDS
T08512
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03440
Homologous recombination
scam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104139715 (TOP3A)
03460 Fanconi anemia pathway
104139715 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scam03032
]
104139715 (TOP3A)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104139715 (TOP3A)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104139715 (TOP3A)
DNA replication proteins [BR:
scam03032
]
Eukaryotic type
DNA Topoisomerases
104139715 (TOP3A)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104139715 (TOP3A)
FA (Fanconi anemia) pathway
104139715 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
104139715
NCBI-ProteinID:
XP_009666302
Ensembl:
ENSSCUG00000000838
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MNFQARLFASCGVRMLPQPWRLFSRAAEDMTLQRIRKVLCVAEKNDAARGIADLLSNSRM
RRREGFSKFNKIYEYDYQMFGQNVTMVMTSVSGHLLAHDFKLPFRKWHSCNPLALFDAEI
EKYCPENYVDIKRTLEREVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLRVFRARF
SEITLHAVRSACENLTQPDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDVLADQL
ISYGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHEHEDSTVVFNWKRNRLFNHTACLV
LYHMCMEDPVATVVEVASKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQG
FISYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIH
PTKYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIAKERFIAQGLMILARNYL
EVYPYEKWSDKVIPVYQKGSRFQPTTVEMVDGETSPPSLLTEADLIALMEKHGIGTDATH
AEHIETIKLRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEG
KKDKLAVLQQQVQKYKQVFIEAVARANKLDQALAQYFGQATEIAEQEEVYPAMPVSIRKC
PQCNNDMVLKTKKNGGFYLSCMGYPACKTAVWFPDFVLDVARDESVCAVCKPHPVHRLKF
KFKRGSVPPMMPLEFVGCIGGCDEMLRELLDLKYLHRSSQPVCSASQQAHHSQANHSFNR
GAGGENRHVKRTTNLSSGHLLSLSSTRAPRPAPSVAPDDGNNAVMCNCGNEAVLLTVRKE
GPNQGRQFYKCSASTCNFFLWADQQSEDRGNTAPPGSVPPRPFAGRGPAGFQSPGGGRGP
ELFGSNSSDSGGGGGTVCKCDQPAVTRTVQKDGPNKGRQFHTCSKPRDQQCGFFQWADEN
MAPGASGDSLNHFGNSGYSREFGSKAKRPSSLSLAATAKKPRTCSICRQPGHTRKTCPQD
H
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcaagcgaggctctttgctagctgcggagtcaggatgctgcctcagccctgg
cgtctcttctctcgggctgcagaggatatgacgttacaaaggatccggaaggtcctgtgc
gtggctgagaaaaatgatgctgccagaggaattgcagatcttctctccaacagcagaatg
cgaaggagagaagggttttccaagttcaacaagatctacgagtatgactaccaaatgttt
ggccagaatgttactatggtgatgacatccgtgtcaggacatttgctggctcatgatttt
aagttgccttttcgcaaatggcatagctgcaaccctctagcactttttgatgccgaaatt
gagaagtattgtcctgaaaattatgtggatattaagagaaccctcgaacgagaagtccag
caatgccaagctctggtgatctggactgattgcgatcgagaaggagagaacattggtttt
gaaataattcacgtttgcaaagccgtaaaaccaaacctccgggttttccgagctcgtttt
tcagagattacgcttcatgctgtcagatcagcctgcgagaatctcacccagccggatcaa
aaaactagcgatgctgttgatgtcaggcaggagctggacctcaggataggtgctgccttc
accagattccagacattgaggctccggaagattttccctgatgttctagcagatcagctg
atcagctatggcagttgccagttcccaacactggggtttgtagttgaacgctttaaagcc
atccaggccttcgttcctgaagctttctataaaatcaaagtgacacatgaacatgaggat
agcactgtggtcttcaactggaagaggaatagactcttcaatcacacagcatgcctggtc
ctttaccacatgtgtatggaggatcctgtagccactgttgttgaggttgcaagcaagccg
aagagcaaatggaggcctctgcccctggacactgtggaacttgagaagctggcttcccgt
aaactgaaaataaatgccaaagaaaccatgagaatagcagaaaaactctacactcaaggg
ttcataagctatccccgaactgagaccaacattttccccaaggagctgaacctctctgcc
ttggtacaacagcagacacaggacccaaactggggagcatttgcacagaggattttggat
cagggtgggccaacccctcggagcggaaccaaatcagatcaggctcaccctcccattcat
cccaccaaatacactgctaacctgcaggggaatgagcagagactatatgaattcattgtg
cgccattttttggcttgctgctctcaagatgccaagggacaggaaacaactgtggagatc
gacatcgctaaagagcgattcattgctcaaggactaatgatcttggcccgaaactatctg
gaagtctatccttatgagaagtggagtgataaggttatcccagtgtatcagaaagggtct
cgctttcagcccaccacagtggagatggtggatggggaaaccagccctccatcactcctc
accgaagcggatctcattgcgctcatggagaaacatggcattgggactgacgccactcac
gccgagcacattgagaccattaagctgcggatgtacgtgggccttactgcagatcagagg
ttccttccaggccacctgggcatggggctggtggaaggctatgattccatgggctacgag
atgtccaagcctgaccttcgagctgagctggaggctgatctgaagctgatctgtgagggg
aagaaagacaaacttgcagttttgcagcagcaggtccaaaagtacaagcaagtcttcatt
gaggctgtggctagagccaacaaattggatcaagccctggctcagtactttggacaagcc
acagaaattgcagagcaagaggaagtctacccagcaatgcctgtttccattcggaagtgc
ccacagtgcaacaatgatatggtcctgaagaccaagaaaaatggcgggttttatctcagc
tgcatgggctatccagcttgtaaaactgcagtctggtttcctgactttgtgctggacgta
gctagggatgagagtgtctgcgctgtgtgcaaaccccatccagttcacagactgaaattt
aagttcaagagaggcagtgtcccacccatgatgcccctggagtttgttggctgtattgga
ggctgtgatgagatgctaagagagctcttggacctgaaatacttgcacaggtcatcccaa
cctgtgtgctcagccagccaacaagctcatcactcgcaggccaaccactcctttaacaga
ggggctggtggtgaaaacaggcacgtgaagaggaccacaaacctgtcatcaggacacctt
ctatccttgagttcaacaagagcacccaggcctgcgccgtctgtggctccagacgatggg
aacaacgcagtgatgtgcaactgtgggaacgaagcagtgctgctaactgtgcgcaaagaa
gggcccaatcaaggcaggcagttttacaaatgcagtgccagtacctgcaactttttcctc
tgggctgatcagcagtcagaggacagaggcaacacagctccgccaggctccgtgccgccc
cggccctttgcgggaaggggcccagcaggctttcagagcccaggaggagggagaggccca
gagctctttggaagcaacagctccgattcaggaggtgggggtggcacagtctgcaagtgt
gatcagccagctgtcacgcgcaccgtccaaaaggatgggcctaacaaaggacggcagttc
cacacctgctctaaacccagagaccagcaatgtggcttcttccagtgggcagacgaaaac
atggcaccaggagcttctggagattctttgaaccattttgggaacagtggatactcaaga
gagtttggaagtaaagctaagagaccaagtagtctctccttagcggccactgccaagaaa
cctcggacctgtagcatttgccgtcagcctggccacaccaggaaaacttgccctcaagac
cactga
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integrated database retrieval system
