Struthio camelus australis (South African ostrich): 104139778
Help
Entry
104139778 CDS
T08512
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04010
MAPK signaling pathway
scam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104139778 (CACNA1B)
04020 Calcium signaling pathway
104139778 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104139778 (CACNA1B)
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104139778 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF4587
Motif
Other DBs
NCBI-GeneID:
104139778
NCBI-ProteinID:
XP_009666436
Ensembl:
ENSSCUG00000001643
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGDEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGT
VSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRSEGRNNISKLSPVDVQEVEQTKVSSIDGAEAPRKHHRHRDK
DKLGEQEKGDVAKDENGESGTSNKEERHRQHRSRSKEVEGGSKEGKSDRNRSQEGGKRHH
RRGSVEEGAEKEHRRHRTHRHSTERQGKEGNGTINGARSERRSRHRGGSRSGNREGDPSS
KGENGEEPHRRHRFRNRALSTYESVEKENGEKEGEAGEKEHRNHQAKENQCEIEASGSVS
IVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPM
NSVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILI
VIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDL
WNILDFIVVSGALVAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDC
VVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEV
EAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSI
FYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMP
QNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPETYEEMLKCLNIVFTSMF
SMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAAR
LIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINR
HNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKNECGSDFAYFYFVSFI
FLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEM
LRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLATGGV
KQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSRE
QVHQPPGGLCQPGPVSLFHPLKATLEQTQPTAFNNAKAFLRQKSSASLNNGGALPASEGG
IKESSSWGTQRTQDVFYETRTPAFERGHSEEISIERVVEMREISPTLTNGEHQPGLESQG
RAASMPRLAAETQPIPDTSPMKRSISTLTPQRPHAMHLYEYSLERMPPDQVHHHHHHRCH
RRKEKKQKSVDRSPHLVADGEAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSC
DRYGSRDRSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLP
QTPLTPRPSITYKTANSSPVHFTSFQTGLPTFSPGRLSRGLSEHNALLRGDSPNQAHATV
ARIGSDPYLGHRDDSDSPYRAVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVP
NGYHYTLGLNTGPGTGTRGRSYYHEADEDDWC
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctgccaacacgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataagcaatcg
atggctcagagggccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagagaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacacctatgtcagaa
agactggacgacactgagccgtactttattggaatattttgttttgaagctggtataaaa
atcatcgctctagggtttgtttttcacaaaggctcttatctccgaaatggttggaacgtg
atggattttgttgtggtcctcacagggattctagcaactgctgggactgattttgacctg
cggaccctgcgagctgtccgagtattacgacccctgaagcttgtgtcaggaatcccaagc
ttgcaggttgtcctcaagtccatcatgaaggcgatggtgcccttgcttcagattgggctg
cttctgttcttcgccatcgtcatgtttgccatcattgggctggagttttacatggggaag
tttcacaaaacctgcttctccaatgagacaggtgatgaggtgggagattttccttgtgga
gaggagccacctgccaggcaatgtgagagcgggaccacctgcagggaatactggcaagga
cccaactacggcatcaccaacttcgacaatatcctgtttgctgtgctcaccgtcttccag
tgcatcaccatggagggatggactgacatcctctacaatactaacgatgccgcaggaaat
acgtggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaagaacgagagagggtagaaaatcgc
cgagctttcctgaaactccgtagacaacagcaaattgaacgagaactgaatggatacctg
gagtggatcttcaaagcggaggaggtgatgctggcagaggaagacaagaacgcagaagag
aagtctcctctggacgggagggccgcctcggaagggccgattcaacaaggcaccgcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagctgcaataaagaagagc
aaaaatgacctgattcatgctgaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccttttgcccgtgccagtttgaagagtgggaagaacgagagctcctcctacttc
cggagaaaagagaaaatgttccgcttcttcatccggcgcatggtgaaagctcagagcttc
tactggattgtgctctgtgtggttgccctcaacacgctctgtgttgccatggtgcactat
gatcagccggagaagctcaccactgctctgtattttgcagagtttgtttttctgggtctg
ttccttactgagatgtctttgaagatgtatggactggggccaagaaattacttccattct
tcattcaactgttttgactttggggtgattgtgggaagtatttttgaagttatttgggct
gcagtgaaacctggcacctcattcggcatcagcgtattgcgagctcttcgactcctgagg
attttcaaagtaacaaagtactggaattccctgagaaatcttgtggtctccttgctgaac
tccatgaaatccatcatcagcttgctcttcttgctgttcctgttcattgtggtgtttgct
ttgctggggatgcagctctttggaggacaattcaactttcaagatgaaacaccaaccaca
aactttgataccttcccagctgccatcctgacagtattccagatcctgacgggggaagac
tggaacgcagtaatgtatcacgggatcgaatcgcaaggtggcgtccactcgggaatgttc
tcctccatttacttcatcgtcctgacattgtttggtaactacacactcctgaatgtcttc
ttggctattgctgttgacaaccttgcaaatgcacaagagctgaccaaggatgaagaggag
atggaagaagctacgaatcaaaagcttgctctgcaaaaggccaaggaagtagcagaagtc
agccccatgtctgcagctaacatttctatagccgcttttgtaaagcaaactcgaggtact
gtatctcgcagctcgtcagtctccagcgtaaattcacccaaacagcagaattcctccaaa
tcgaagtctgtttgggagcagaggaccagccagatccggatgcacaatttccgagccagc
tgtgaggcactatacaacgagctggatccagaggagcgggtgcgttacgcaaccaccctt
cacatccggccggacatgaagactcatttggatcggcctctggtggtcgagccaaggagt
gaagggaggaacaacatcagcaagctgagccccgtggatgtgcaggaagtggaacagacc
aaggtcagctctatcgatggtgcagaggccccccgaaaacaccaccggcatcgggataaa
gacaaactgggagagcaagagaagggtgacgtggctaaggatgagaatggggagtctggc
accagcaacaaggaggagcgccaccggcagcacaggagccgcagcaaggaggtggaaggg
ggcagtaaggaagggaaaagtgatcgcaacaggagtcaagaagggggaaagagacaccat
cgccgggggtcagtggaagaaggtgcagagaaggagcaccgtaggcatcggacccaccgt
cattctactgaacgtcaaggcaaggaaggcaacgggacaatcaacggggccaggagcgag
cggcgttcccgacaccggggaggatcgaggtctgggaaccgggaaggagatcccagttca
aagggagagaacggtgaagagcctcacagacgccacaggttcaggaacagagcattgtca
acgtatgagtcggtggagaaggaaaatggggaaaaggagggggaggctggagagaaagag
caccgcaatcaccaagccaaggagaatcagtgcgagatagaggctagtggaagtgtgagt
attgttcctgtgcacacccttcccagcacctatctgcagaaagtgccggagcagccagaa
gatgctgacaaccagaagaacgtgacccggatgattcagccacctctggacaaaaccacc
actgtgaacatccctgtcactatcactgcccctccaggggaaaccactgtcataccaatg
aacagtgttgaatttgaaagtaaaaccgaggagaagaaagatgtcgatgacttgacgaaa
aatgggcctaaaccaatcttgccttacagttccatgtttatcttaagtcctacaaatcca
attcgacgcttgttccactacattgtcaacttgcgctatttcgagatggtcatcctcata
gttatagccctcagcagcattgccctggctgcagaagaccctgtccaagctgagtcacca
aggaatgatgctctgaaatacttggattatatatttacgggtgtctttacctttgagatg
gtgatcaagatgattgacttggggttgctactccaccctggctcctatttccgtgacctg
tggaatatcctggacttcattgtggtcagtggagccttggtggcatttgccttctcgagt
ttcatgggaggaaccaaaggcaaggacatcaacacaatcaagtctctgcgagtgctgcgg
gtcctaagaccattgaagaccattaaacggctgccaaaactaaaggctgtctttgactgc
gtggtgaattccctgaagaacgtcctcaatatcctgatagtttacatgctgttcatgttc
atttttgctgtcattgctgtgcaactcttcaaaggcagattcttctactgtaccgatgag
tcgaaggagctagagaaggactgcaggggtcagtacctcgattacgaaaaaaacgaagtg
gaggcgcagcccagggagtggaaaaaatatgagtttcactatgacaacgtactctgggct
ctgctaacgcttttcacagtctccacaggagaagggtggccaactgtgctgaagcactca
gtggatgctacctatgaggaacagggtcccagccctggctaccgaatggaaatgtctatc
ttttacgtggtgtattttgttgtcttcccttttttctttgtgaacatctttgtggcgtta
atcatcatcaccttccaagagcaaggagataaagtgatgtcagaatgcagcctagagaaa
aatgagagggcctgcatagacttcgccataagtgccaagccactgacccgctacatgcct
cagaacaagcaatcttttcagtacaagatgtggaaatttgtggtgtcccctccctttgag
tattttatcatggtcatgattgcactcaacactattgttctgatgatgaagttctatgat
gctccagaaacatacgaagaaatgttgaaatgcctgaacattgtgtttacatccatgttt
tcaatggaatgtgtgctgaagatcattgcctttggtgtgctgaattatttccgagatgcc
tggaatgtctttgattttgtaacagtattgggaagtattactgatattttagtaacagag
attgcggacacggacaacttcatcaacctcagcttcctgcggctcttcagggcagcaaga
cttatcaagctccttcgccagggttacactatccgcatcttgctctggacgtttgtgcag
tcttttaaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcatctatgcc
attattggcatgcaggtttttggaaacattgcgctagatgatgaaacttccattaatcgg
cacaataatttccgtaccttccttcaagccttgatgcttctgttcaggagtgccactggc
gaagcctggcacgagatcatgctgtcatgtctgagcaaccgagcctgcgacccgctgtct
ggcctcaccaaaaacgaatgtggaagcgattttgcctacttctacttcgtgtcgttcatc
ttcctgtgctccttcctgatgttaaacctatttgtggctgtgattatggacaactttgaa
tacctgacaagagactcctccatccttggcccgcatcatttggatgagtttgttcgtgtc
tgggctgaatatgacccagctgcctgcgggcgcatcagttacactgacatgtatgagatg
ctgagacacatgtccccgccgctaggccttggaaagaaatgccctgctcgcgttgcctat
aagcgcctggtgcggatgaacatgccaatctcgcctgaagatttaacagtccacttcacc
tccacactgatggccttgatccggaccgctctcgaaatcaagcttgccacagggggcgtg
aaacagcaccagtgtgatgctgagctgagaaaagagatctcgctggtttggcccaatctg
tcccaaaagacactggatttattggtgcctcctcacaaacccgatgagatgaccgtgggg
aaggtctatgcagcgctcatgatatttgacttctacaagcagaataaaaacagcagggaa
caagttcaccagcctcctggaggcctgtgtcagcctggaccggtgtcgctgttccacccc
ctgaaggccactttggagcaaacccagcccacagcattcaacaatgcaaaagcgttcctt
cgtcaaaaaagctctgcttcgctcaacaacggaggtgctctgccagcctcggagggtggg
atcaaagaatccagttcctggggcactcaacgcacccaggatgtgttttatgaaaccagg
acaccagctttcgaacgaggccactcagaagaaatctccattgaacgggtggtagaaatg
agggaaatcagccccacacttaccaatggagagcaccaaccaggcctggagagccagggc
cgggcggcttccatgccacgcctggctgcggaaactcagcccatcccagacacgagcccc
atgaagcgctccatctccacgctgaccccgcagcgtcctcacgccatgcacctgtacgag
tactccttggagcgcatgccaccagaccaggttcaccaccaccatcaccaccgctgccac
cggcggaaagaaaagaagcagaagtccgtggacaggtctccccatctggtggccgacggg
gaagctgtcgctcagtccggtgagtcttcttccaaggataagaagcaggagcgtggccga
tcacaagagaggaagcagcactcctcctcctcctccgaaaagcagcgcttctactcctgc
gaccgttatggcagccgggaccgttctcagcccaagtctgctgatcaaagcaggcccacc
tcacccaacggagggccggagcaaggtccacacagacagggcagtggttcagttaatggg
agccccttgctgtcgacatctggtgctagtaccccatgccggggtcggaggcagctccca
cagacgccactgaccccacgccccagcatcacttacaagaccgctaactcctcgcccgtg
cacttcaccagtttccaaaccggcctgcccactttctccccgggacgcctgagccgtggc
ttgtccgagcacaacgcgttgctgcgcggggactccccgaaccaggcccacgccacggtg
gcccgcatcggctccgacccctacctgggtcaccgcgatgacagcgatagcccctaccgc
gcggtgccggaggacacgctcaccttcgaggaggctgttgccaccaattcaggaaggtcc
tcaaggacttcttacgtctcgtccttgacttcccagtcgcaccaaatccgccgggttccc
aacggttaccattacacgctgggcctcaacacgggccctgggacgggcaccagaggacgt
agttattaccatgaagctgatgaggatgactggtgctag
DBGET
integrated database retrieval system
