Struthio camelus australis (South African ostrich): 104139870
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Entry
104139870 CDS
T08512
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104139870 (SRRM1)
03015 mRNA surveillance pathway
104139870 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104139870 (SRRM1)
03041 Spliceosome [BR:
scam03041
]
104139870 (SRRM1)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104139870 (SRRM1)
Spliceosome [BR:
scam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104139870 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104139870
NCBI-ProteinID:
XP_009666562
Ensembl:
ENSSCUG00000001863
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MMRLGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFE
DDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAF
LELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRR
RSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPVKPKETIVQEATSNSDIPK
APKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHR
SRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSS
SSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNR
ARKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQ
YRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRM
QMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPS
PRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRR
SPSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPLRRGASASPQRRQ
SPSPSTRPIRRVSRTPEPKKTKASTPSPRSVRRVSSSRSASGSPEPAPKKHQGPPSPTRS
RSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKA
AAAAAAAAGAAADTTSAQEDQEAETEPKKETESEAEDNLDDLEKHLREKALRSMRKAQVS
PPS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaag
ctgttgaagcagttgaaatttgcagaatgcctagaaaagaaggtggatatgagcaaagta
aatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatccttggatttgaa
gatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatccagattccaaa
atgatgcaaatcaacctgactggttttttgaatggaaaaaatgctagggagttcatgggg
gaactgtggccactgctgttaagtgcacaagaaaacattgctggtattccaactgctttt
ctggaactgaagaaagaagaaataaaacagcgacagatagagcaggagaaactggcttct
atgaagaaacaagatgaagacaaggagaagagggataaggaagataaagacaacagagaa
aagagagacagatccaggagcccaagaagacgcaaatcaaggtctccttcccctagaagg
agatcgtcgcctgtcagaagagagcggaaacgcagccattctcgctcccctcatcacaga
accaagagccgcagtgctactcctgcaccagaaaagaaagaggcgactcctgagccagaa
cctgtgaaaccaaaggagaccattgttcaagaggcaacatcaaacagtgatatcccaaaa
gctcccaaacctgaacctcctgtaccagagactaaggaaacttcaccagaacgtaattca
aaaaaggagagagagaaggagaaagagaagacccgtcaaagatccccaactcggtccaaa
tcaaggtcaagatctcgatcacgttccccatctcattctagaccaagaaggcgtcataga
tcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacgacgaccatctcca
cggaggaggagtcctccgaggcgaatgcctcccccgcccagacacagaagaagcagatcc
cctgtgaggcggaggagacgatcatcagcatctttatctggcagcagctcttcctcttcc
tcctcgcgttcccgatcaccaccaaagaaaccacctaaaagaactgtgtccagtcctcct
cgtaaaacacgtagactgtctccttccgcaagtcctcctaggcgaaggcacagaccatcc
ccaccagcaagtccacctccaaaaccacgtaggtctccaacaccccagcagtcaaatcgt
gcaagaaaaagccgtggctctgtttctcctggcagagcatcagcacccaaacataagagt
actgaaaaaagagaatctccttcgccagcgccaaaaccaaggaaagcagaactgtctgaa
tcagaagaagataaaggaggtaaaatggctgcagcagattctgtgcagcagaggcgtcaa
tacagaaggcaaaatcaacagtcttcgtctgattctggttcatcctcctcatctgaagag
gaacgacctaaaagatccaatgtgaagaatggggaagttggtaggcgtcggcgccattca
cattcacgcagtccgtctccttctccacgaaaacgacagaaggaatcttcccctcggatg
cagatggaaaagaggtggcaatcaccagtgatgaaaagtaggcggaggagaagtccatca
cccccaccagccaggcggcgacgctctccttcacctgcccctcctccaaggcggcggcgg
tcaccttcgttacctcgtcgaaggtctccatcaccacccccacgcagacgctcaccctct
ccaagaagatattctccaccgatacagagacgatattctccttctccacctcctaagaga
agaacggcttctcctcctccccctcctaaacgaagggcatcaccttctccacagtcaaaa
cgtagagtctcccattcaccaccgccaaaacaaaggagctcaccagctgctaagaggcgt
tcaccttcagtatcttccaagcacaggaaggggtctcctcccagtaggtctaatcgggaa
acacgttcgccgccgcaaaacaaaaggcattcaccttcacctcggcctagagcttctcat
acctctgcaagcccaccgccactgcgaaggggagcttcggcttcacctcagagaagacag
tctccatctccaagcactagacccatcaggagggtgtcaaggacaccagaacctaagaag
acaaaggcttccacgccaagtccacgatctgtgagacgggtgtcttcatcaaggtctgcc
tcaggatcacctgagccagcaccgaaaaaacatcaaggacctccatctcctactcggtct
cgttcaccttctgcaaactggtcacctgcaaaaaaggctaaaagtccaactcagagccca
tcacctgcaaggaattcagatcaagaaggtggtgggaagaagaagaagaaaaagaaggat
aagaagcataaaaaggacaaaaagcacaagaaacacaaaaagcataagaaggagaaggct
gcagcagctgcagcagctgctgccggggctgcagcagataccacttcggcacaggaagac
caggaagcagagacagaacccaaaaaggagacagaaagtgaagcagaagacaacctggat
gatctagaaaaacacctgcgagagaaggcactgaggtcaatgaggaaggcgcaagtgtca
ccaccatcttag
DBGET
integrated database retrieval system
