Struthio camelus australis (South African ostrich): 104140123
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Entry
104140123 CDS
T08512
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scam03016
]
104140123 (TRUB1)
Enzymes [BR:
scam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104140123 (TRUB1)
Transfer RNA biogenesis [BR:
scam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104140123 (TRUB1)
Prokaryotic type
104140123 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104140123
NCBI-ProteinID:
XP_009666977
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MTNAVAGEREGQQLSKPVHQEAMHLAADAVGQGEHRTQPGSVPYVPELPKYHPETCKQRL
RSQKALLSDRHPLRSVFATPPKSFSQLIPAVKPLFLGALQRVSERHPISMENRAGSFLHP
REHCFSCVLKLSCNATFPFLFAEAGVQANRNKRKKQILKIGHGGTLDSAATGVLVVGIGK
GTKMLRAILAGSKKYTAIGRLGKATDTLDATGKVTEEKPYDQITKGDLENVLQKFTGDIM
QVPPLYSALKKDGQRLSSLMKRGEAVEAKPARPVRVYSLSLQHFQPPLFTLDVECGGGFY
VRSLVSDIGKELSTCASVQELTRTKQGPFTLEEHALYEDKWTIDEIARSLEHCMSLLPGE
PSHKKFKTEAPGETAVSCEDK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgctgtggcgggggagcgggagggacagcagctttccaaaccagttcatcag
gaagccatgcatcttgctgctgatgctgtaggacagggtgaacaccgcacacaaccagga
agcgtaccgtacgtgcccgagcttcctaagtatcacccagaaacctgtaagcagagatta
cgaagtcagaaagctctgctttctgaccgtcatcctctgcgatctgtctttgcgacaccg
cctaagagcttctctcagctaattcctgcagttaagcccttatttctgggcgcgctacag
cgcgtttcagaaagacacccgatttcgatggagaaccgcgccggctccttccttcatccc
cgtgagcattgtttttcctgtgttctaaagttgtcctgtaatgctacctttccatttcta
tttgcagaagctggtgtgcaagcaaataggaacaaaagaaagaaacagattttgaaaatt
ggacatggcggaactttggatagcgcagctacaggagttctggtggttggtattggaaaa
ggaacaaaaatgctgagagctatattggcaggttccaagaaatatactgccattggacga
ctgggcaaagctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttat
gatcagataacaaaaggagatcttgaaaatgtgctgcaaaagttcacaggggacataatg
caggttcctccactctattctgctttgaagaaggatggacaaaggctatcctctctcatg
aaaagaggagaagcagttgaagcaaagcctgctcggccagtaagagtgtacagcctctcc
ctccaacacttccagccaccactgttcacactggatgttgaatgtggtggtggcttttat
gtcaggagcctggtcagtgacattggcaaagaactctctacctgtgccagtgtgcaagag
ctgacccgaaccaaacaggggccatttacgctagaggagcatgcactttatgaagacaaa
tggacaattgatgaaattgcacgatccttagagcattgcatgtctcttctcccaggagag
ccatctcataaaaaatttaagacagaggctcctggagaaaccgctgtgagctgtgaagat
aagtga
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