KEGG   Struthio camelus australis (South African ostrich): 104140212
Entry
104140212         CDS       T08512                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
scam  Struthio camelus australis (South African ostrich)
Pathway
scam03013  Nucleocytoplasmic transport
scam03015  mRNA surveillance pathway
scam03040  Spliceosome
scam05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:scam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104140212 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104140212 (ALYREF)
   03015 mRNA surveillance pathway
    104140212 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104140212 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scam03019]
    104140212 (ALYREF)
   03041 Spliceosome [BR:scam03041]
    104140212 (ALYREF)
Messenger RNA biogenesis [BR:scam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104140212 (ALYREF)
    TREX complex
     104140212 (ALYREF)
Spliceosome [BR:scam03041]
 Complex C
  Other components
   EJC/TREX
    104140212 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104140212 (ALYREF)
SSDB
Motif
Pfam: FoP_duplication RRM_1 F07F6_N
Other DBs
NCBI-GeneID: 104140212
NCBI-ProteinID: XP_009667107
LinkDB
Position
Unknown
AA seq 152 aa
MQQHGLKRAHSSPSVSQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY
NGVPLDGRPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGGTGGFGGGGGNRRGSRGGSRG
RGRGAGRTSKQQLSAEELDAQLDAYNARMDTS
NT seq 459 nt   +upstreamnt  +downstreamnt
atgcaacagcatggattgaagcgtgctcactcttctccctctgtttctcaggaactcttt
gcagagtttgggaccttgaagaaggcagcagtgcactatgacagatctggccgcagtcta
gggacagcagatgtgcattttgaaagaaaggcagatgctctgaaagctatgaagcagtac
aatggagtccccttggatgggcgccccatgaacattcagctggttacgtcacagatagac
acacagaggagaccagcacagagtgtaaacagaggtggcatgaccagaaaccgtggtggt
acaggaggatttggtggtggaggtggcaacaggcgaggtagtcgtggtgggagcagaggg
agaggcagaggagctggaagaacttccaaacagcaactctctgcagaagaactagatgca
cagctggatgcttacaatgccaggatggacaccagctaa

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