Struthio camelus australis (South African ostrich): 104140274
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Entry
104140274 CDS
T08512
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104140274 (TRERF1)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
104140274 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
Myb_DNA-bind_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
104140274
NCBI-ProteinID:
XP_009667233
Ensembl:
ENSSCUG00000006653
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYQQHHMNSLPSLNHSYGTSVMDAPQASPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSVSGNHVSVRNNLNSQNAMWSPLGQGESHDGYQYSYS
QSGESRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNSGDSALRQLL
SQKPAVEQQPVTSSVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQIH
SAFQQGQPHVQQMQSQQLLPQQMQHLQQTQYYAQSQQGHQRLSLQEIQQQQQQPTRQQHQ
RQCPMQIAQYYQTQPVMQQLQQQQQQMQLQLPPYHREPDPKTMHEPHQYPQDPSHPVQLI
QLGAVPQYCYQDPHEQYRHLYPQSMLQQQEDQQKQYPNESRGQSLNSHVGLTPPETAEDP
AQQEVNSVGNAVPHRTLLPLSGVHLNNKSSQQDSPSTMWPQQMHLSDGRLQPLSPEQSGQ
SRETFPERADAKNKLTCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLP
KEVDSLAPIVMPVSVPVKLLSPEPSTQPSATTATVKDKPANPVSDDEMPVLVKMTCSPPC
SPKAAKPCSSSEISKKPHQSAAKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGA
TLYQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPL
TPLTPTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDM
HKATLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDVMVALE
KLLLRKPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQC
VEYYYTWKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEEIEEDRKEEREMQKSPDPP
AIPLVGPIDLPALQSLTLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTI
PGTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQ
EEQQRQKAQKAAVAAEMAATIARTTGPAGHSVIPLDHMSLVKRVENVGDVEDDVVQELGD
VMEENEVMDADLLLEDEDADLLQDDAEL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaaccaaccatactgccaacaacaatgagaacttgtat
taccaacaacaccacatgaactcccttccatctctaaatcatagttacgggacatctgtt
atggatgctcctcaggcgtccccgctctcccctcagtttccccaagattcaagagacagc
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacaaacaagt
tggacgcattctgtctcaggaaaccatgtctcagtaagaaacaatttgaatagtcaaaat
gcaatgtggagcccccttgggcagggggaatctcatgacggataccaatattcttattct
caatctggtgaaagtcgatcacaaaaaattaccagtggggtcctacataaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggtt
ttgcacactgagtcttcaatggtggataattctggtgatagtgcgcttcggcagctgctg
tctcagaagccagcagttgagcaacagcctgtaacttccagcgtacagagatatcaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcaacaccaacagttgtactatgactaccagcagcatttatcgcaaatgcagatacat
tctgcgtttcagcaaggacagccgcatgttcaacaaatgcagtcccagcagctcttaccg
caacagatgcagcacttgcagcagactcaatactatgctcagtcgcagcaaggacatcag
cggctctcattacaagagatccagcagcagcagcaacagccaactcggcagcagcaccag
aggcagtgtccaatgcaaatagctcagtattatcaaacgcaacctgtcatgcagcagtta
cagcagcagcaacaacagatgcaattgcagcttcctccgtaccacagggaacctgaccca
aagactatgcatgaaccacaccagtaccctcaggatccaagtcatcctgtgcagctcatc
cagttgggagcagtgcctcagtattgctaccaagatccccatgaacagtataggcatttg
tacccacagagtatgctgcagcagcaagaggatcagcaaaagcaatatccgaatgagagc
cgaggtcagtctctgaactctcatgttggcctcactccaccagagacagcggaggatccc
gcacagcaggaggttaattctgtaggtaacgctgttcctcatcgaactcttctgccactg
tcaggagttcatctgaacaacaaaagctctcagcaagactctcccagcaccatgtggcct
cagcagatgcacctgtcagatggcagactgcagccgctgtccccagaacaaagtggccag
agcagagaaacatttcctgagagagctgatgcgaagaacaagctaacatgttcaatatgc
ttgaaggagtttaagagtttgcctgctctaaatggtcacatgaggtcacatggaggagta
agagcatctcctaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcct
aaagaggtggatagcctcgcacccatcgtcatgccagtgtctgtccctgtaaagcttctg
tcacccgagcccagcacgcagccctctgccaccactgccacagtcaaagacaagcctgcc
aaccctgtgtcagatgatgagatgcccgttctcgtgaagatgacttgctctccaccgtgc
agcccaaaagcggccaagccctgctcatcctctgaaattagcaaaaaacctcatcaaagt
gctgcaaaattagaggaaaacttcaaaccattgcaggacaagaagaagtatcggcataga
cccgaacctctcttcatacctcctccttccttcaacttcagtatgtcccactccggtgcc
acactgtaccagagccagctccgttccccgcgcgtccttggagatcatctgctagaccgc
acgcacgagctccccccttacactccaccacccatgcttagtccagttcgccaaggctct
ggtctcttcagcagtgttatcacatcatctcatagcacctctcatactcagctgccactt
actccgctgacacctactccacgggtactcctgtgtcggtctaatagtattgatggaagt
gtcattccagtgacgcctggccccggagaacagactgtggaaccacgaatcaatatcggc
tctaggttccaggctgatattcctgagctgcaggacagattgctaatggagaaagatatg
cacaaggctactttggtttggaaaccgtggccagaactggagaataaagtcttccagcag
agagtggaagacctcttaaatatgagctgttccagtgtattacctggtggaggaactaac
tcggaatacgctttgcactctctctttgaggcaaaaggagatgttatggttgctcttgag
aagctgctgttgcggaagccagtgagattgaagtgtcatcctttggcaaattaccactac
gctggctctgacaaatggacgcatcaagagagaaggctgttcaaagaggcattgtccacc
tacagcaaggattttatatttgtacaaaaaatggttaagtctaagacggttgcacaatgt
gtggaatactactatacttggaagaaaatcttgcgtttgggacggaaacacagaacgcgt
ttagagaaaaagagagaggaatgcctgacaagtggagaagaggaagttctagaggaagat
gaggagatcgaagaagacagaaaggaagaaagagaaatgcagaaatctcctgacccgcct
gccatccctcttgttggacctatagatctgcctgcccttcagagtctcacactttcttcg
tcctcctttatctgtgaaatgccaaactgtggcgctgtgttcagttcccggcaagcgctg
aatggccacgctcgcattcatggaggtacgaatcaggtgacaaaaacacgatgtaccatt
ccaggcactaagcagaaatctggtacacagagcggatactgctccatcaagagttcacct
gcccacagcacaacaagcggtgagaccgacccaacaacaatttttccttgtaaggagtgt
ggcaaggtgtttttcaaaatcaaaagccgcaatgctcatatgaagactcacagacaacaa
gaagaacagcaaaggcagaaggctcagaaagctgctgtggcagcagaaatggcagccact
attgcgagaactactgggccagctgggcatagtgtgatccctctggatcatatgagtttg
gttaaacgtgttgaaaacgtaggtgatgttgaagatgatgttgttcaggagttaggtgat
gtcatggaagagaatgaagtcatggatgctgaccttctattagaggatgaagatgcagat
ctactgcaggatgatgctgagctgtaa
DBGET
integrated database retrieval system
