Struthio camelus australis (South African ostrich): 104140627
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Entry
104140627 CDS
T08512
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104140627 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104140627 (DROSHA)
03009 Ribosome biogenesis [BR:
scam03009
]
104140627 (DROSHA)
03036 Chromosome and associated proteins [BR:
scam03036
]
104140627 (DROSHA)
Enzymes [BR:
scam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
104140627 (DROSHA)
Messenger RNA biogenesis [BR:
scam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104140627 (DROSHA)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
90S particles
RNase
104140627 (DROSHA)
Prokaryotic type
rRNA processing factors
104140627 (DROSHA)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
104140627 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
104140627
NCBI-ProteinID:
XP_009667793
Ensembl:
ENSSCUG00000008905
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYDQQTAPPTTYSNPPAT
GYMPPRPDFVPYPPPVPPSTQSPISQCPMRPPFPNHQMRQGFPVPPCFPPAPPPVPNPSN
TPVPGTPTGQNTFPYMMPPPTVPHPPPPPVIPQQVNYQPVYSAGYSQQSFPPPNFNSYQH
NSSSFQSSATNSSGSKNQYQAEKSQSDRRSPERSKHYDEHRHREHGHLHSDRHRSNNHGD
RRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERSRERERERHRHRDSRRSPSPDRSY
KKDYKRTGSRSPSRERKRPRWEEDRERWSESQSTSKEKNYTTIKDKESEENASEKNEEED
DELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFEEELGRRQAKAKAARP
PWEPPKTKLDEDLESSSDSDCDSDDDSSCSSSSDSEVFDVIAEIKRKKAHPDRLHEELWY
NDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITVSPPTNF
LTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVRG
LELFSSYLFKDILELYDWNLKGPSLENDSTCCPRFHFMPRFVRFLPDGGKEVLSMHQILL
YLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQFNP
DVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLSQREEA
LQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIG
YTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINT
LINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLATYRTAIV
QNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLF
GRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLL
ARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNN
RTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVC
FFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYF
KGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQER
EPDETEEARK
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattccggacgagggtgtccccgcggccaggggggaccaggagcacgaact
tcaacacagacctaccgacctcagaacctacggcagcttcacccacagcagccctctgtg
caataccagtatgaccagcaaacggcccctccgacaacctattcaaaccctccagccact
ggttacatgcctcccaggccagactttgtgccgtatcctcctccagtgcccccttccaca
cagagtcccatcagccagtgtcccatgaggccaccttttccaaaccatcagatgaggcag
ggtttcccagtgcctccgtgcttccctcccgctcctccaccagtgccaaatcctagcaat
actcctgtgccaggaactccgacggggcaaaacacatttccttacatgatgccgcccccg
acagtaccgcatcctcccccacccccagtcataccgcagcaagtcaactaccagcctgtt
tactccgcagggtattcacagcagtcattcccccctccgaacttcaatagctatcagcac
aattccagctctttccagagcagcgctaccaacagcagtggcagcaaaaatcagtaccag
gcagagaagtcgcaaagcgatcgacggtctccagagaggagcaagcattacgacgagcac
cggcatcgtgagcatgggcacctccacagtgacaggcatcggtcgaataaccatggggac
cggcgggatcgaggccggagtccagacaggaggaggcaagaaagcagtcggcaccggaca
gattatgacagaggaagaatatcacctcaccatagaagttatgagcgtagcagggagcgg
gagagggagaggcataggcaccgtgatagcagaagatcaccatcaccagacagatcctac
aaaaaggattacaagagaacaggaagccgctctccaagcagagagagaaagagaccccga
tgggaggaggacagagagaggtggtctgagagccagagtaccagcaaagagaagaattat
accactatcaaagacaaagagtcagaggagaacgcatctgaaaaaaatgaagaggaagat
gatgaattacttaagccagtctgggttcgctgtacccattctgaaagctattattcaaat
gaccctatggatcaagtgggagactctactgtggtaggaacaagcaagctcagagatctg
tatgaaaagtttgaggaggagttaggaaggcggcaggcaaaggccaaagcagccaggcca
ccatgggagccaccaaagaccaaactggatgaagacttagagagctccagtgactcagac
tgtgactctgatgatgacagcagctgttctagcagttcggattctgaagtttttgacgtc
atcgcagaaattaagcgtaaaaaagcacaccctgatcgtcttcatgaagaactatggtac
aacgatccgggacagatgaatgatggaccgctgtgtaagtgcagtgctaaagcccgacga
acaggaataagacatggcatttatcctggtgaagagcccattaaaccatgtcgacccatg
accaacaatgctggaagactataccactatcgaattacagtgtcacctcccacgaacttc
ctaacagacagacctactgttattgaatacgatgaccacgaatatatctttgaagggttc
tccatgtttgcacatgccccactaacaaatattcctttatgtaaagtaatcagatttaac
attgactacacaattcatttcattgaggagatgatgcctgagaatttttgtgtgagaggt
cttgagctgttctcttcttatctattcaaagatattttggagctctatgactggaatctt
aaaggtccttcgcttgaaaacgattctacttgttgccccaggtttcacttcatgccgcga
tttgtgagatttcttccagatggaggaaaagaagtactgtcgatgcatcagattcttctc
tacttgttacgatgcaataaagctctggtgcctgaagaggagattgccaacatgcttcag
tgggaagaactggaatggcagaaatatgcggaggaatgcaaagggatgatcgttaccagc
cctggcatgaaacccagctcagttcgtattgatcaactggaccgcgaacagttcaatcct
gatgtaattactttccccattattgtccactttgggatacgacctgctcaactcagttat
gctggagatcctcaataccagaagctgtggaagagttatgtgaagctgcgtcacctgctg
gctaacagtcccaaagtcaaacaggctgataaacagaaattatcgcaaagagaggaagcg
ctgcagaagatccggcagaagaacacgatgaggcgtgaggtgactgtggagctaagcagc
cagggattctggaaaaccgggattcgctctgacgtctgccagcatgcaatgatgcttcct
gtcctcacccaccatattcgctaccatcagtgtctcatgcatttggacaaattgataggc
tacacttttcgcgataggtgcttgctgcagcttgccatgactcatccaagccatcactta
aactttggaatgaatccagaccatgccagaaattccttatccaactgtggaattcgacaa
ccaaaatatggagatagaaaagttcaccatatgcacatgagaaaaaaagggataaatacc
ttgataaatattatgtcccgtttgggtcaggatgatccagctccttccaggatcaatcac
aatgagcgtttggaatttctgggagatgctgtggtggagtttttaacaagtgtccacttg
tactacctgtttcccactctggaggaagggggattagctacatatcgcactgccatcgta
cagaaccaacatctggccatgttggctaagaagctggaactggatcgatttatgctttat
gctcatggtccggacctttgtagggagtcagatctccgccacgccatggccaactgcttt
gaagccctaataggagctgtttatttagaggggagcctagaagaagcgaaacaattattt
ggacgtttactctttaatgacaaggacctgcgggatgtatggcttaattatccactacac
ccactccaactgcaagagtccaatactgacagacaactcattgagacctctccagttctt
cagaagctcacagagtttgaggaggcaattggagtaatttttactcatgttcggctacta
gcacgtgcgttcactctgaggacagtgggttttaaccatttgactctaggccacaatcag
aggatggaattcctgggtgactccataatgcagttggtagccacagagtatttattcata
catttccctgatcatcacgaagggcacttaacgctgttgagaagttctctggtgaacaac
aggacgcaggccaaagtggcagaagagctgggtatgcaagaatttgccatcactaatgac
aaaacaaagagacctgtagctcttcggactaagactttggccgatctcttggaatccttt
attgctgccctgtacattgataaagatttggaatatgtgcacactttcatgaatgtatgc
ttttttccacgtttaaaggagtttattttaaatcaagattggaatgaccctaaatctcag
cttcaacagtgctgcttgactctcaggacagaaggaaaagagccagacattcctctttac
aagactctgcagactgttggaccttctcatgccaggacatacacagtagctgtttatttc
aaaggcgaaagaataggatgtggtaaaggaccaagtattcagcaagcggaaatgggagct
gcaatggatgcacttgaaaaatataactttccccagatggcccatcagaaacggttcatt
gaacggaaatacagacaagagttgaaagaaatgaggtgggaaagagagcatcaagagaga
gagccagatgaaactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
