Struthio camelus australis (South African ostrich): 104140723
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Entry
104140723 CDS
T08512
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104140723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104140723
03036 Chromosome and associated proteins [BR:
scam03036
]
104140723
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104140723
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104140723
Chromatin remodeling factors
BAF complex
104140723
PBAF complex
104140723
GBAF(ncBAF) complex
104140723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HSA
BRK
QLQ
ResIII
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
104140723
NCBI-ProteinID:
XP_009667937
Ensembl:
ENSSCUG00000009444
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPSM
GPTDYPQEGMHQMHKTIDGLHEKGMVEDVHCSSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIMPGDPQVMSQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLVIAQVLVSFLCQIAGIGLHAISGPVTGPGP
APGIPGHTAAITPKTWTEGQAPDMSVSSTPQKLAVPPPSGRPSPAPPAAQPAAAMPGPSV
PQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGS
LPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREAR
MTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANT
EREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEH
KQAQKAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKVLL
GPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDPNS
EEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTLKH
YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLS
NWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWK
YMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSC
STFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVI
KCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIE
ESFAEHLGYSNGVINGAELYRASGKFELLDRIL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggtgccatgcctcatcctggcccttcccctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagta
cacagcatgatggggccaagtcctggtccacccagtgtcccgcacccgatgccgtcaatg
gggcctactgattatccacaggaaggcatgcatcaaatgcataagaccattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtagctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagtcaaggttatatgtct
ccacacccatctccactaggagccccagagcatgtgtccagtccgatgtctggaggaggt
ccaactccaccacagatgactcccagtcagccaggacccattatgccaggagacccacaa
gttatgagtcaacctaacagaggtccttcccctttcagccctgtacagctacatcagctc
cgagctcagattctagcctacaaaatgttagctagaggtcagcctttaccagaaaacctc
caacttgctgttcaaggaaagaggaccctggtcattgcccaggtattagtttctttcctc
tgtcaaattgcaggtattgggttacatgcaataagtggtcctgtaactgggccagggcct
gctccaggaatacctggacatacagctgccattacccctaaaacttggacggaaggccaa
gctccggatatgagtgtttccagtacaccacagaagcttgctgtaccacctcctagtggg
aggccttctcctgccccccctgctgcccagcctgctgctgctatgcctgggccttctgta
ccacagcctccgcctggccagccttcacccattgttcaactgcagcaaaaacagaatcgt
attagccctatccagaagccacaaggactggatcctgttgaaatactccaagaacgtgaa
tataggcttcaggctcgaattgctcacagaattcaggaactggagaacttacctggctct
ttgcctcctgatctgcgtaccaaagctacagtggagttgaaggcacttaggttactgaat
ttccagcgccagctaagacaagaggtggtagcttgcatgcgtcgtgacacaacactggag
acagcactgaactccaaagcctacaaacgaagcaagcgccagactctgagggaagcccgt
atgaccgaaaaacttgagaaacagcagaagatagaacaggagagaaagcgtagacagaag
catcaggaatacctgaacagcatattacagcatgctaaagattttaaagagtaccatcgg
tcagtggctgggaaaattcagaaactttctaaagccgtggcaacttggcatgccaacact
gagcgtgagcagaaaaaggaaacagagagaattgagaaagaaagaatgagaagactgatg
gctgaagatgaagaagggtaccgtaaactgattgaccaaaagaaagatagacgcctggct
tacctgttgcagcaaacagatgaatatgtggctaacctgactaatctggtttgggagcat
aaacaggcacagaaagccaaagagaagaagaagaggaggagaagaaagaagaaggcagaa
gaaaatgcggaaggaatggcatctggtcttggtcctgatggagagcccatagatgagagc
agtcaaatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagttcttctt
ggaccagaagcaccaaaagcaagtcagctggatgcctggctggaaatgaaccctggctat
gaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggaggaggat
gatgaagaagaatcaagcaggttagaagcagatgagaagatacttctggatcctaacagt
gaggaagtttctgagaaagatgctaagcaaatcattgagacagccaaacaagacgtggat
gatgaatacagtatgcaatatagtgccagagggtctcagtcctactacaccgttgctcat
gcgatcacagaaagggtggagaagcagtcttctcttcttattaatggcacactaaaacat
tatcagctccagggactagaatggatggtttcactctataataacaatttgaatggaatt
ttagctgatgaaatggggctaggaaaaaccatacagactattgcactcatcacttacctg
atggagcacaaaagactcaatggcccctatctcattattgttcccctttcgactttatcc
aactggacatatgaatttgacaagtgggctccttctgtggtgaaaatatcttacaagggt
acacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaacgttctt
ttaactacttatgagtacataataaaggacaaacatattcttgctaagattcgatggaaa
tacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgactcaggtc
ttaaacacgcactatgtggcccctaggcggatactgctgactgggactcctttgcagaac
aaactgcctgaactttgggctcttctcaacttcctccttccaaccattttcaagagctgt
agcacatttgaacagtggttcaacgctccgtttgccatgactggagaaagggtggactta
aatgaggaagagactattctgatcatccgtcgtctccacaaagtgcttcgacccttcttg
ctgagaagattgaagaaagaggtcgagtctcagctgccagaaaaggtggaatatgtcatc
aaatgcgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagccaagggaatc
cttcttacagatggttctgagaaagacaagaaggggaaaggtggggcaaagactcttatg
aacactatcatgcaattgagaaagatatgcaaccacccatatatgtttcagcacattgag
gagtcctttgctgaacacctaggctactcaaatggtgtcatcaatggagcagaactatat
cgggcttcagggaagtttgagctacttgatcgtattcta
DBGET
integrated database retrieval system
