Struthio camelus australis (South African ostrich): 104140751
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Entry
104140751 CDS
T08512
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104140751 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104140751 (WDR33)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104140751 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Collagen
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104140751
NCBI-ProteinID:
XP_009667975
Ensembl:
ENSSCUG00000009588
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKT
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGAGPQGFMGPQGP
PGPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGSAGPQGHLGPQGLPGSQTHLG
PQGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGL
NPRGMQGPPGPRDNQGPTPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTML
GPPQELRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLL
GDGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHSQGPGLNKGDSRGPPNHHMGPLSD
RRHDQNSGGPDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHP
DKRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSD
DRYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENARG
RDHGVRGRGRGTLRGGRKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPA
NRERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGSSGPSQRVPK
SGRSSSLDGDHHDGFHRDEAFGGGPTGGNNPSRGGRSGSNWGRGSNMNSGQSRRGASRGG
GRGR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccccgttttttccatatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgactttgcacagcagcaagcaatgcaacag
cttactttcgatggaaagcggatgagaaaagccgtgaaccgaaaaaccatagattacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgatttggtcccacctataggaatgttgaac
aaccctatgaatgctgtaacaacaaaatttgttcggacgtctactaataaagtaaaatgc
cctgtatttgttgtcaggtggactcctgaagggaggcgcttggttacaggggcatctagt
ggagagttcaccttgtggaatggactgactttcaattttgaaacgatattacaagctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacacggagcagatgtgaagtgtgttgactggcatccaacgaagggattggttgtc
tcaggaagtaaagatagccaacagccgataaagttctgggatccaaagaccggccagagc
cttgccacactacatgctcataaaaacacggtgatggaggtaaaattgaatctgaatgga
aactggctactaacagcttctcgtgaccacctctgcaagctctttgacattcgtaatctg
aaagaagaacttcaggtcttcaggggtcataagaaagaggccacagctgttgcctggcat
cctgttcatgaagggctgtttgccagcggagggtccgacggctctttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgagggaatgatctggagt
ctggcatggcatccccttggacacattctctgttcgggctcgaatgatcacaccagcaag
ttttggactcgaaatcggcctggagataaaatgcgagatcgttacaacttgaatctgctg
cctggaatgtcagaggacggtgtggaatatgctccaggagatgatcttgaacccaacagc
ctagcagttattcctgggatgggaatacctgagcaattgaaaatagccatggagcaagag
cagatgggaaaagacgagtccaatgatattgaaatgacaatcccaggactggactgggga
atggaggaagtaatgcagaaggaccaaaagaaggtgccacagaaaaaagtgccctatgca
aagccaataccagcacagtttcagcaggcatggatgcagaataaagtccctttgcctccc
ccacctgagccattaaatgatagaaaggaagatattaagctggaggagaaaaagaagaca
caggcggagattgaacaggaaatggcagcacttcagtacacaaacccacaactcttggag
caactgaagatcgagagactcgcacaaaagcaagctgagcaagtgcagccgccacctcca
ggaggctctcttcacggaccccagccttttccaggtcaaggcccaatgtcacagatgcct
caaggatttcagcagcccctcccacctcagcagatgccaatgaatatgcctcaaatggga
cctcctggtccacaaggacagttcagacctccgggaccccaaggacaaatgggacctcaa
ggtcctccgttacaccaaggcggtgcaggtccacaagggttcatgggaccacaaggacct
ccgggcccccaaggacctccacaaggaatgccacggcctcaggatttacatgggcatcaa
ggaatgcagagacatcctggccctcatgggccgatggggcctccaggtccacagggtagt
gctggcccacaaggccacttaggaccacaaggcctacctgggtctcagactcatttagga
ccgcagggtccacctggcccacaaggtcacttgggtcctcaaggtcctccaggtggtcaa
ggaatgcaagggccacctggtccccgaggaatgcaaggacctcttccccatggcatgcaa
ggagctccaggatctcaagggatgcaaggccctatatctcaagggcctttgatgggactt
aatccaagagggatgcagggtcccccaggacccagagataaccagggacctactccacaa
gggatgatgatgggtcatccgcaagaaatgagaggtcctcatatgcagagtggtttacta
ggacatggtccccaggagatgaggggcctacagggacccccgcctcaaggtacaatgtta
ggaccgccacaagaattgcgtgggccaccaggtccacaaggccagcagggacctccacaa
ggctctttagtagggcctcaaggaaacatgcaaggacctcagggacagccgaacccttca
agggggccacatccttcccagggccctctgcctttccagcagcagaaaactcctttgctg
ggcgatgggcctcgtcccccatttaatcaggacggacagaacccaggtcctccaccgttg
ataccgggactggggcagcagggaggacaaggtcgtctcggccctcacagccaaggacct
ggtcttaataaaggtgactcccgtggtccaccaaaccatcacatgggccctctctcagat
agaaggcacgaccagaacagtggtggtcctgatcatgggcctgagagagggttgtttcga
ggtggccaggagtggggtgatggtagagacagcaggggcatgccagatagacgaggacct
cacccagatttccatgatgactttgatcgaccagatgacttccgtgacgacttccatcca
gataagagatttggccatcgattacgggaatttgaggggagaggaggtcccccattacaa
gatgaaaaatggagacgcggtggacctgggcctccctttcctcccgatcacagggaattt
gaaggagggggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagat
gatagatacccacgggatcctgaggatgcacgcttccggggaagacgcgatgagagcttc
agaagaggaggaccctcaagacatgagggccggggacccagggggagagatggctttcct
ggtcctgaagattttgggccagatgacgcttttgactctccagatgaaaacgcgagagga
agggaccacggtgttcgggggcgaggtcgcggtactcttagaggaggccggaagggtctg
cttcctactccagatgaatttccacgttttgaaggagggcggaaaccagaatcctgggat
ggaaacagagaaccaggtcctcgtccagatcaccctcctcacgatggacattctccagct
aaccgagaacgttcttcttcgctccagggcatggacatggcctcactaccaccacgcaaa
cggccctggcatgatggaccagggacctctgaccacagagaaatggatgctccaggtggg
cctccagaggagagagggaaaggacgaggaagttcaggaccttcacagagagtgccaaaa
tctgggaggtctagttctttagatggagaccaccacgatggattccacagggatgaagct
ttcggtggaggccctacaggaggcaataacccttccagaggaggaaggagtgggagtaac
tggggaagaggaagtaacatgaactctggtcaatcaagaagaggagcatctaggggtggt
ggaagaggacgatag
DBGET
integrated database retrieval system
