Struthio camelus australis (South African ostrich): 104141189
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Entry
104141189 CDS
T08512
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104141189 (JMJD1C)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104141189 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
JmjC
zf-C5HC2
FYVE
C1_2
Motif
Other DBs
NCBI-GeneID:
104141189
NCBI-ProteinID:
XP_009668663
Ensembl:
ENSSCUG00000007211
LinkDB
All DBs
Position
Unknown
AA seq
2453 aa
AA seq
DB search
MCTNSCLLQTSVISDELFLAKTTFKPLVGKSVYNSITAVEFLVDKQLDFITEDSAFQPYQ
DDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGI
ITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSNQN
SNTVHGHYTRAQANSPRPAMNSQTAAPKQNSHQHQQQRNTRPNKRKGSDSSMPDEEKMKE
ERYDYIGRGENPKNKNKHFLSKRRKPEEDEKKLNMKRLRTDNISDYSESSDSEISNKRLT
DSSSEQNSENELKSKNTSKINGEEGKSQTIEGLEEQTLTDRQSPWDEIQEDKKHEETERL
KSSVLDLQEKSSLHAAEQPTPYEQNTKDPHVQECSAEKHHTTELKNEQCVPRPPTPKCVV
DITNENNSEKESQDNAASTFGLQTVQKTESHSSDLKQKFANANFLETRKQETDQSWVSSV
VVNKTDLMQPGVVKALSITEHLIPEKEKVPYGSFISSLNVASLAEESKLHKQSPVPDSVK
SKPSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSASKTEHDLPRSSFHP
VPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGANHISPYLHQHNYPLHSSSHRTC
LNPNAHHPALTGSSHLLAGSSTQTPLSAISTHPLSTASHHSVHHPHLLPAVLPGVPAASL
LGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPN
GTHAYSGLGLPSSKWVHPETPVNTEASLRRNTPSPWLHQPTPVTSADSLGLLSHIPVRPS
SADPLRPLKLTTHSSPPLSKSIVEHHKEELERKAFIEPLRSVTTAPIKTELEQSRTQTTK
EGHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPFTAKIKALEGEREN
YSRVTSLSSSPKSHSVKYEKDAERSVSELYKMKHSVPQSLPQSNYFTTLSNSVVNEPPRS
YPSKEASNVYVDKQTNCPSTAASPQSLPSYISSLSKPPPLIKHQPESEGSASKITEQLSQ
SVQSHSVTSFRSDSRSPTHLSVSSSNTLRSMPALHRAPVFHPPVHQNLEKKESSYSSLSP
PTLTPVQPVNAGGSKIQELQKPPTLVPEPKEAQTVYKGISEQNLSEIWKPNNAPSNEKME
WHVERMSGKSQSATASVIVRPPSSTKYDSVPVMQSASKDRVSERSSAVTNQTDCLKIAEA
RETGRVILPNMNSDSTRTHYEKKFPAVSQGSLPSSVTPTTTMICSTKTDVTTSAATTTSV
SSWSSSEVTCSLSNTVLACAPLECAASRATSQAAAQAQACKASTAAPVTPGSGKAGSATQ
PSSGFSTSTDFVHLKKHKAALAAAQFKSSNASETESNSVKNQTFSTSLSLDSAIVCSTIN
KANSVGSGQASQTSQPNYHTKLKKAWLTRHSEEDKNINKKENSGNSVSEIIKPCTVNLIA
STSNDLQNNIDSKILADKFVKEDKHPRRKAKRTYESGSESGDSDESESKSEQRTKRQPKP
TYKKKQNDLQKRKGDTEEEVKPNGVLSRSAKEKSKLKLQSSSNSTGIPRSVLKDWRKVKK
LKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGV
VRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQLVTSEKTAMSWV
KKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYA
WMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHNIREKFEIKSHCQCATKQSMQSGKLP
AMNGVSQVLQNVLNHSNKISLCMPESQQQNTPPKSETNGNTSPRSDVSTDSKLTPPESQS
PLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDNSESPNCKTSPPASQNNEQGSTLR
DLLTTTAGKLRLGSTDAGIAFAPVYSTGTPSGKSGRTMPNILDDIIASVVENKIPPNRTP
KTNVKSEIKDEPKDDRKCILDDCSKLYNDIQYSWICDKHVLWLRDHKNNNNWKLFKECWK
QGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEFWDGFEDVSK
RQKIKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLNLASHLPGFF
VRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVLSKSGVLKKF
EEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVLPEHDPIRDQ
SWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVTEDFVSPEHL
VQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEMEDMEEN
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaattcatgtctgcttcagacatccgtaatctcagatgagcttttcttagca
aagacaacattcaaacccttggttggaaaaagtgtgtacaattcaattactgcagtagaa
ttccttgtggacaaacagctggattttataactgaagatagtgcctttcagccctatcag
gacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggaggta
aaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccatactcctta
aatggttatagggtgagagtatacagacaggattctgccacccagtggtttactggtata
attactcatcatgatctcttcactcgcactatggttgttatgaatgaccaggtgttagaa
cctcaaaatgttgatccttctatggttcagatgacctttctagatgatgttgttcactct
ttgttgaaaggtgaaaatattggcatcacttcacgccgaaggtctcgttccaaccagaac
agcaacacagttcatggtcattatacacgtgcgcaagcaaatagtcccagaccagcaatg
aattcccaaactgcagcaccaaaacagaattctcaccagcaccagcagcagcgcaacact
cggccaaacaaaaggaaaggctccgacagcagcatgcctgatgaagagaaaatgaaagaa
gagagatacgattatattggtcgaggagaaaatcccaaaaacaaaaataaacacttcctt
agtaaaagaagaaaacctgaagaggacgaaaagaaattaaatatgaagaggctgcggaca
gacaatatctcagattactctgagagcagtgactcagaaatttcaaataaaagattaaca
gattcatcctcagagcaaaattcagaaaatgagttaaaaagcaagaacacttcaaagata
aatggggaagaaggaaaatcccaaactatagagggattagaagaacagacactaacagat
aggcagtctccatgggatgaaatacaggaggataaaaaacatgaagagacagaaagactg
aagtcatctgtcttagatctgcaggaaaagtcttcactccatgcagcagagcagccaaca
ccttatgagcagaacaccaaggatccacatgttcaagagtgcagtgcagaaaaacatcat
accacggaattaaaaaatgagcagtgtgtacccagacctcctactccaaaatgtgttgtt
gatataactaatgaaaacaactctgaaaaggagagccaggataacgctgcaagtaccttt
ggtttgcaaacggttcagaaaacagaatctcacagcagtgatttaaaacagaagtttgca
aatgcaaatttccttgaaacaagaaaacaggaaactgatcaaagttgggttagcagtgtt
gttgttaacaagacagatttgatgcaacctggggttgtgaaagcgttatcgataactgaa
catttaattcctgaaaaagaaaaagtgccgtatggctcatttatatcttcgttaaatgta
gcttctctagcggaagaaagcaaactgcataaacaaagcccagtccctgattctgtgaag
tcaaaacctagtgcttcagttgatcatcctaaaacaaagtcacctgatgttaagcctaaa
ttcacccagtcttctgatactgtgaagtctaaggttagttcgcaaaacagccatgctact
ggattaacaaggtcagccagtaaaactgagcatgatttgccaaggtctagtttccatcca
gttccagctagagttagtgctctagaagctactaaaagtcctcttatcattgacaagaac
gaacattttacagtatacagggaccccactctgattggacaagaaacaggagctaatcat
atttcaccttatttgcatcagcataattatccactgcattcctcatcccaccgaacctgt
ttaaatccaaatgctcatcatcctgcattaactggttcatcccatctgttagccgggtct
tcaactcagactccattgtccgctattagcactcatcctcttagtaccgcatctcaccat
tctgttcatcaccctcatctacttcctgcagtgttacctggagtgcctgctgcctccttg
ctgggtggccatccacgactagagactgctcatgctagcagcttaagccatttggcatta
gcccaccagcagcagcaacagatgttacaacaccagtctccacatcttcttggacaagct
catccttctgcttcctataatcagctagggctttatccaattatttggcagtacccaaac
ggaacacatgcttactcaggacttggtctgccctcctcgaaatgggtccaccccgaaact
cctgttaacacagaggcttccttgagaaggaatactccgagcccgtggttgcaccagccc
acccctgtgacctcagccgacagtctcggtttactgagtcacattcctgtgagaccatcc
agcgcagacccccttcggcctctcaagctgacaacgcattctagtccgcccttgtccaaa
agtatagtagagcatcacaaagaagaactggagaggaaagcatttatcgaacctttgcgt
tccgttacaactgcccccataaagactgagctagagcaaagcagaacacagaccacaaaa
gagggccatatgcacagacattttgcagatccaatgttgaaccagctgccaaggccacct
caggagactggggagcgactaagcaaatacaaagaagaacacaggcgaatactccaagaa
agtattgaagttgctccttttacagctaagataaaggcgctggagggggagcgagagaac
tattctagggtaacatcgttatcttcaagtcccaaaagccattcagtaaaatatgagaaa
gatgcagagcgttctgtatcagaactgtataaaatgaagcattcggttccgcagagtttg
ccgcagagtaactatttcaccacgctgtctaacagtgtagtaaatgaaccaccaagatca
tacccgtccaaggaagcttcaaatgtctatgttgataagcagactaattgtccttcgaca
gcagctagtccccagtctctcccttcttacatttcttctctttccaaacctcccccttta
ataaagcaccagccagagagcgaaggctctgcaagcaagataactgagcagctttcacag
tcagtgcagtctcactcagtaacttcttttagaagtgacagcaggagccctactcatctg
tcagtctcatcttcgaatacactccggagcatgcctgccttgcacagagccccagtgttt
caccctccggttcaccagaacctggagaagaaggaaagcagctacagcagcctgtcacct
ccgactctgactcctgttcaacctgttaacgctggtggcagcaaaatacaggaattgcaa
aagccaccaactttagtacctgaaccgaaggaagctcagacggtttacaagggcatttct
gaacaaaatttgtcagaaatatggaagcctaataatgccccaagtaatgaaaaaatggaa
tggcatgttgaaagaatgagcggaaagtcacagtcggctacagcgtctgttattgtacgt
cctccttctagtacgaaatacgatagcgtaccagtgatgcagtcggcttccaaagatcga
gttagcgagagatcttcagctgtgacaaatcaaacagattgcctgaaaatagcggaagcc
agagagactggaagagtcattctgccaaatatgaactcagacagtactcgcacacactat
gaaaagaaatttccagctgtctcgcaaggcagccttcctagctctgtcacccccaccaca
actatgatctgtagtaccaaaacggatgtaaccacatcagcagctacaactaccagtgta
tcaagctggagtagttcagaagtgacttgctccttatcaaacacggtcctggcctgcgcg
ccgctggagtgtgctgcctcgagagccacaagtcaggcagcggcgcaggcccaggcgtgc
aaggccagcactgcggctccagttacgccaggcagtggcaaggccgggagcgccacgcag
cccagctcggggttctccacctcgaccgattttgtccatttgaaaaagcacaaggcagcg
ttggccgcagctcagtttaaaagtagtaacgccagtgagaccgagtccaactctgtgaaa
aatcagacattttcaacctctctctccctagacagtgctatcgtctgtagtacaataaac
aaagcaaactctgtaggcagtgggcaggcttcccagacaagtcagccaaactaccacact
aagctgaaaaaggcttggctaacaagacattcggaggaagataaaaacattaataaaaaa
gagaattcagggaacagtgtttcagaaattattaagccatgtactgtcaatttaatagct
tctacatcaaatgatttgcaaaataacatagatagtaaaatcctggcagataagtttgtg
aaagaagataagcaccctaggagaaaagcaaaaaggacttatgagtctggctctgaaagc
ggagactctgatgaaagcgagagcaagtcagagcaaaggactaaacggcagcccaagcca
acttacaaaaagaaacaaaatgatttgcagaaaagaaagggtgatacagaggaagaagta
aaaccgaatggtgttcttagcaggagtgccaaagaaaaaagcaagctgaagttacagagc
agcagtaatagcactggtatacctcgctcagtattaaaagattggcgcaaagtaaagaag
ctgaagcaaacaggagagtcctttttgcaggatgattcttgctctgaaataggaccgaat
ttgcaaaaatgcagagaatgtaggttaataagaagtaagaaaggtgaagaaccaactcac
tcaccagtattttgtagattttattactttcggcggttatcttttagtaagaacggagtg
gttaggatagatggtttctcctctcctgatcaatatgatgatgaagcactgagtttatgg
acacatgaaaactacgaagatgatgaactggacctagaaacttctaaatacattttagat
atcataggtgataagttctgtcagttagtaacatctgagaaaacagccatgtcctgggtg
aaaaaagatgccaaaatcgcgtggaaaagagcagtgagaggagtccgcgagatgtgtgat
gcatgcgaagccacgttatttaacattcactgggtctgccaaaaatgtggatttgtggtc
tgcctggattgttacaaggcaaaggaaagaaaaagctctagagataaggagctgtatgcc
tggatgaagtgtgtgaagggacagcctcatgatcacaaacacttgatgccaactcaaatt
attcctggctctgttttgacagatcttctagatgctatgcacaatattagagagaaattt
gaaattaaatcccattgtcagtgtgccaccaaacagagcatgcaatccggcaagctccct
gcaatgaatggtgtgtctcaggttttacagaatgtccttaatcacagtaataaaatttct
ctgtgcatgcctgagtctcaacagcagaatacccccccaaagtcggagacaaatggtaat
acaagtccaaggagtgatgtaagcacagacagcaagttaacaccacctgaatcgcagtcg
ccactgcattggttagctgatcttgcagagcagaaagccagagaagaaaagaaagagaat
aaagaatgtccttctggaaagcattcaaaggaagaaaaagaccaggataattcagagtcc
ccaaactgtaaaacctcccctcctgcatcccagaacaacgaacagggttcaaccttacga
gatttactaactacaacagcaggcaaactgcgtctaggttctacagatgcgggtattgct
tttgctccagtttactccacaggaacaccaagtggcaaaagtggaaggactatgccaaac
attctcgatgacataattgcttcagtggtagaaaacaagattccaccaaatagaacacca
aagacaaatgtaaaatctgaaataaaagatgagccaaaggacgatagaaaatgtattcta
gatgactgcagtaaattgtacaatgatattcagtattcttggatctgtgataagcatgtt
ttgtggctcagagaccataaaaacaacaacaactggaagctcttcaaagagtgctggaaa
caagggaggcctgtattagtgtccggtatgcataagaaaatgaacttcagcttgtggaaa
gcagagtcaattagtctagattttggaaaccagcaagctgatatcttgaattgcaaagac
agcattatttcaaacaccaatgtcaaggaattctgggatggttttgaagatgtttcaaaa
cggcagaaaataaaaaatggggaaacagctctactaaaattgaaagattggccttctggt
gaagatttcaaggctatgatgccagcaagatatgaagacttattaaaaagtttacccttg
cctgaatattgtagtccagaaggaaaattaaacttggcttctcatctgccaggatttttt
gtccgtccagatttgggacccagactatgcagtgcatatggtgtggctgctactaaagat
catgatataggaactacaaatctccatattgaagtttccgatgtagtgaacatccttgtt
tatgttggcatagcaaaaggaaatggagtactttccaaatcaggagtattgaagaagttt
gaagaagaagatttggatgatcttttaaggaagagattgaaagattcaagtgaattacct
ggtgctttgtggcacatttatgctggcaaagatgctgacaagataagggagtttctgcaa
aagatagcaaaagaacaaggcctagaagttttaccagagcatgatccaatacgtgatcag
agttggtatgtgaacaaaaaacttcgccaaagactttttgaagaatatggagtaaaaacc
tgtacggttattcagtttcttggtgatgctattattctaccagcaggagcacttcatcag
gtgcaaaattttcacagctgtgttcaagtaactgaagactttgtgtctccagaacatctt
gtacagtcatttcacttaacgcaggaactgaggctgtcaaaggaagaaatcaattatgat
gataaactgcaggttaaaaatatcttgtatcatgcggttaaagaaatggtgagagctttg
aagattcatgaaggcgaaatggaagatatggaagaaaactaa
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integrated database retrieval system
