Struthio camelus australis (South African ostrich): 104141250
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Entry
104141250 CDS
T08512
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03015
mRNA surveillance pathway
scam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104141250 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104141250 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scam03021
]
104141250 (SYMPK)
03019 Messenger RNA biogenesis [BR:
scam03019
]
104141250 (SYMPK)
Transcription machinery [BR:
scam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104141250 (SYMPK)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104141250 (SYMPK)
U7-dependent histone pre-mRNA processing factors
104141250 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Symplekin_C
PDS5
Cnd1
INTS7_N
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
104141250
NCBI-ProteinID:
XP_009668770
Ensembl:
ENSSCUG00000007361
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MLLPPDLGMETGGNLGAQHLLLGQVLPHLDWGTQAGGGLGAQHPFLGQTLPSPGQGPQAR
GDLGVQHLLQLCTLACPGQRTQAEGNWGAQHPLSGQTLLPNPSWGKPAPFPLLSVPLGAV
LVGFTPRCSDGGCGGARGEGVCPWGHWSLSPPRSPLVPPQVQELIINKDPTLLDNFLDEI
IAFQADKSIEVRKFVVGFIEEACKRDIELLLKLIANLNMLLKDENVNVVKKAILTMTQLY
KVALQWMVKSKVISELQEACWEMVSAMASDIILLLDSDNDGIRTHAIKFVEGLIITLSPR
MPDSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLLKFMVHPAISSINLTAAL
GSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLRHPSSGDF
QPQITTLLVDLGTQQAEIARSMPNPRDVRKRPRDEPDPTLKKMKIEPPLGEDDEDKDLEQ
VAVPAPKASSQGSAQSDTDITAEFLQPLLTPENVANLVLISMVYLPETMPASFQATYTPV
ESAGTEAQIKHLSRLMATQMTAAGLGPGVEQTKHLKEEPKEEKMAKPESVVIKRRLSALS
QGQAISVLGAQGSPANLLEEEAPQTKRRPEPIIPATQPRLSGAGGRKKVFRLGDVIKPLS
DMQMEKKGTVTPSPERRLSLSPMIETISLSERCAEAPVSLSGDSRSSGVALWGTFVGRIF
TKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHE
KDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTE
ETIKQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLL
VENCPKGAETLGKRLGKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVV
KEVFNRLLGTQHGRAAASPGTVLQAPRGAPPSPADAVVPAVTNLCFAERNVYTSEVLAVV
MQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVGADGCLSVRPSRPWCL
QVSPPGLGAAICPSTDVSGWSFLDLARLSQPWCFWVSPPGLGAAICLSVRPSWPRCLQVS
PCGLSVAFCPSPGVSGCPFLGLARLSVQALVCPGGPSWAWSVCPSPSAFGWLFWGSVRPS
VCLSQP
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgttgctccctccggacttggggatggagacaggaggcaatttgggtgctcagcacctg
cttttgggccaggtgttgccccatctggactgggggacacaggcaggaggcggtctgggt
gctcagcacccatttttgggccaaacattgccctctccaggccaggggccgcaagcaaga
ggagatttgggtgtccagcacctactgcagctctgtacgttggcctgtcctggccaaagg
acgcaggcagaaggaaattggggtgctcagcacccactttcaggccaaacattgctccca
aacccctcctgggggaagcctgctcccttccccctgctctccgtgcctctcggtgctgtg
cttgtggggtttactcctcgctgtagcgatgggggttgtggaggagcgaggggtgaaggt
gtttgtccctggggccactggagcctgtccccacctcgcagccctcttgtccctcctcag
gtgcaggagctgatcatcaacaaggaccccacgctgctggacaactttttggacgagatc
atcgctttccaggctgacaagtccatcgaggtgcggaagttcgtggtgggcttcatcgag
gaggcctgcaagcgggacatcgagctgctcctgaagctcatcgccaacctgaacatgttg
ctgaaggacgagaacgtgaacgtggtgaagaaagccatcctcaccatgacccagctctac
aaggtggccttgcagtggatggtgaagtccaaggtgatcagcgagctgcaggaggcctgc
tgggagatggtgtcggccatggccagcgacatcatcctcctcctcgactcggacaacgac
ggcatccgcacgcacgccatcaagttcgtcgaggggctcatcatcaccctgtcgccccgc
atgcccgactcggatgtgcccaagcgccacgagaacgacatcagcctcgagcgcatcccc
aaggatcacccctacattaagtacaacgtgctctgggaagagggcaaggccgctctggag
cagctcctcaagttcatggtgcacccggccatctccagcatcaacctcacggcggccctg
ggctccctggccaccatcgcccgccagcggcccatgttcatggcggaggtgatccaggcc
tacgagacccttcacgcgaacctaccgcccaccttggccaagtcgcaggtgagcagcgtg
cgcaagaacctcaagttgcacctgctgagcgtcctgcggcacccgtcctcgggcgacttc
cagccccagatcaccaccctcctggtagacctgggcacccagcaggccgagatcgcccgc
agcatgcccaacccccgtgatgtccgcaagcggccccgtgacgagcctgaccccaccctc
aagaagatgaagatcgagccacccctgggcgaagacgacgaggacaaggacctggagcag
gtagcggtaccggcacccaaagcatccagccagggcagcgcccagtcggacacggacatc
acggccgagttcctgcagcccctgctgacgcccgaaaacgttgccaacctggtgctcatc
agcatggtgtacctgcccgagaccatgcccgcctccttccaagccacctacacgcccgtg
gagtccgccggcacggaggcgcagatcaaacacctctcccggctcatggccacgcagatg
acggcagcgggccttggccctggggtggagcagacaaagcacctcaaggaagagccgaag
gaggagaaaatggccaagcctgagagcgtggtgatcaaacggcgcctctcggccctgtcc
caaggccaggccatctccgtgctgggcgcccagggctctcccgccaacctgctggaggaa
gaagccccgcagaccaagcggcgccccgaacccatcatccccgctacgcaacccaggcta
agcggcgccggtgggcgcaagaaggttttccgcctgggcgatgtgatcaagccgctgagc
gacatgcagatggagaagaaggggaccgtcaccccgtcccctgaacggcgcctcagcctt
tctcccatgatagagaccatctctttatctgagagatgcgcagaagctcccgtgtcactc
tctggggacagccgcagctcaggggtggcattgtgggggacgtttgtcggcaggattttc
accaaagtggtgctggaggcgccgctgatcaccgagagtgccctggaagtcatccggaaa
tactgcgaggacgagagccgcacctacctgggcatgtccacgctgcgcgacctgatcttc
aagagaccctccaggcagttccagtacctgcacgtcctcctcgacctcagctcgcacgag
aaggacaaggttcgccagcaggccttgctcttcatcaagcgcatgtacgagaaggaccag
ctgagggaatacgtggaaaagtttgccctcaactacctgcagctcctggtgcaccccaat
cccccgtccgtgctcttcggggctgacaaggacacggaggtggccgctccctggacggag
gagaccatcaagcagtgcctgtacctctacctggccctgctgccgcacaaccacaagctc
atccacgagttggcctccgtgtacaccgaggcgatcgccgacatcaagcgcaccgtcctg
cgggtcatcgagcagccgatccgcggcatgggcatgaactcccctgagctcctgctgctg
gtggagaactgtcccaagggagccgagacgctggggaagcggctggggaaacgcgtccgt
gatctctatcacaagaggctgccggacgtgcgcttcctcatccccgtcctcaacggcctg
gagaagaaagaggtgatccaggctctgcccaaactcatcaagctgaaccccatcgtggtg
aaggaggttttcaaccgcctgctgggcacacagcacggtagggctgcggcctccccgggg
acagtcctgcaggcccctcgcggtgcccccccgtcccccgctgacgccgttgtccccgca
gtcaccaacctctgcttcgccgagaggaacgtctacacctcggaggtgctggcggtggtg
atgcagcagctgatggagcagagcccgctgcccatgctgctcatgcgcaccgtcatccag
tcgctcaccatgtacccccgcctcggtggcttcgtcatgaacatcctctcccgcctcatc
atgaagcaggtgggagccgacggctgtctgtctgtccgtccgtcccggccttggtgtctc
caggtgtcccctcctgggcttggcgcggccatctgtcccagcaccgatgtctctgggtgg
tccttcctggacttggcgcgtttgtcccagccctggtgtttctgggtgtcccctcctggg
cttggcgcggccatctgtctgtctgtccgtccgtcctggccccgctgtctccaggtgtct
ccttgtgggctcagtgtggctttttgtcccagccctggtgtctctgggtgtcccttcctg
ggcttggcacgtctgtctgtccaagccctggtgtgtccaggtggcccttcctgggcttgg
tctgtctgtcccagccccagtgcctttgggtggctcttctggggctcagtacggccgtct
gtctgtctgtcccagccctga
DBGET
integrated database retrieval system
