Struthio camelus australis (South African ostrich): 104141438
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Entry
104141438 CDS
T08512
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04137
Mitophagy - animal
scam04140
Autophagy - animal
scam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104141438 (HIF1A)
04137 Mitophagy - animal
104141438 (HIF1A)
04148 Efferocytosis
104141438 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104141438 (HIF1A)
Transcription factors [BR:
scam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104141438 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
104141438
NCBI-ProteinID:
XP_009669035
Ensembl:
ENSSCUG00000008246
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
CGSGPSGRPGGEGGTPESLDVLRTLGGPRNKRIPISSSVFWISSERRKEKSRDAARCRRS
KESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGELETEAKMEKELNCF
YLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGHSVFDFTHPCDHEELREMLTHR
NGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDTCSNQTHCG
YKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELL
GRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQ
PQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFSKAELEDTNSLFEKLK
QEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPL
PASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMPQVQEQPTSPSDASTSQSSPEP
SSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQ
LRSFDQLSPLESSSSSSQNAATITIFQQTQTPSNTADEIKPVTEHVDDVKTLIVPSSPVH
VISETSSAPASPYGGNRSRTASPIRVGKGTLDQTEKSCPAAPSLLTVTLNKRSTAMDEEL
NPKMLALHNAQRKRKMEHDGSLFQAVGIGSLLQQTGDHGANASLAWKRVKGCKTNGHNGV
EQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
tgcgggtccgggccttcgggccggcctggaggtgaagggggcacgcccgagtccttggat
gtgctaaggaccctcggtggcccccgcaataaacgcatcccgattagttcttcggtgttc
tggattagttcagaacgcagaaaggaaaaatcaagagatgcagccagatgccgaagaagc
aaggaatccgaagtgttctatgaacttgctcatcagctgcctctcccacacaccgtgagc
gcacaccttgacaaagcctctattatgagactgaccatcagctacttacgaatgagaaag
ctgctagatgctggtgagctggagacagaagccaaaatggagaaggagctgaactgtttt
tacttaaaagctcttgatggatttgtcatggttctctctgaagatggggacatgatttac
atgtctgaaaatgtgaacaagtgtatgggactcactcagtttgagttgacggggcacagt
gtatttgatttcactcatccgtgtgaccacgaagagctgagagaaatgcttacacacaga
aatggtcctgtgaaaaagggcaaagagcagaacacggagcgcagcttttttctcagaatg
aagtgtacactgactagcaggggaagaacagtgaatattaagtctgctacatggaaggta
ctccactgcactggacatattcgtgtgtatgacacatgcagtaatcagactcactgtggc
tacaaaaagcctcccatgacatgtttggtgttgatctgtgaacctattcctcatccatca
aacattgaggtccccttggacagtaaaacgttcctcagtcgtcacagtcttgatatgaaa
ttttcctattgtgatgaaagaattacagagttgatggggtatgagccagaggaactcttg
ggtcgttcaatttatgagtactatcatgcgctggattctgatcatctgaccaaaacacac
catgatatgttcacaaaagggcaggtgacaacaggacagtacagaatgcttgctaaacaa
ggtggctatgtgtgggttgaaactcaagcaactgttatatacaacactaagaattctcag
ccacagtgcatagtatgtgtaaactatgtgttgagtggcattgttcagaaagacttgatt
ttttccctcggacaaactgagtgtatgctgaaaccggtggagtctcctgatatgaaaatg
accaaaatattcagcaaagctgaactggaggataccaacagcctctttgaaaaacttaaa
caggaaccagatgctttaactgtgctagccccagctgctggagacacaattatctcctta
gatttcagcagcaatgagtctgatgaacaacaatgtgatgaagttcctttgtataacgat
gtaatgctcccctcatccagtgagaaattgcagaatataaatatggcaatgtccccactg
cctgcctctgaaactacaaagccacttcgtagcaatgctgatcctgcactcaatagagaa
gttgtatcaaagctggagccaaacacagagccactagaactttcttttaccatgcctcag
gtgcaagagcaaccaaccagcccttcagatgcaagtaccagccaaagttcacctgagccc
agtagtcccaatgactattgctttgatgtggataatgatatggctaatgaattcaaactg
gaattagtggagaaactctttgcgatagatacagaagcaaaaaatccgttttctactcag
gaaactgatttagacttggagatgttggctccttatatcccaatggatgatgacttccag
ttacgctcctttgatcagctatctccactggaaagcagttcttccagctctcagaatgca
gccaccattactatatttcagcagactcagacaccatcaaatactgctgatgaaataaaa
cccgtgacagaacacgtggatgatgtgaagacactaattgttccttcatctcctgtccac
gtaatcagcgaaacgagtagtgccccagcatcgccatatggtgggaacaggagtcgaact
gcctctccaatcagagtaggaaaaggaacattggatcagacggagaaatcttgtccagca
gcacccagtttgctaacagtcactctgaataaaagatctactgcaatggatgaagaacta
aatccaaagatgctagctttgcataatgctcagagaaaacgaaaaatggaacatgatggt
tcactttttcaggcagttggaattgggtctttattgcagcagacaggtgatcatggggca
aatgcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggtcataatggagtg
gagcaaaagacaatcattctactatcaactgacatagcaagtaaacttctagggcagtcg
atggatgagagtggactaccccaactcacaagttacgactgtgaagtaaatgctcccata
caaggcaacagaaacctgctacagggtgaagaactgctcagagctctggatcaagttaac
tga
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