Struthio camelus australis (South African ostrich): 104141651
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Entry
104141651 CDS
T08512
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scam03009
]
104141651 (DDX54)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104141651 (DDX54)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
Pre-60S particles
Helicases
104141651 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
104141651
NCBI-ProteinID:
XP_009669334
Ensembl:
ENSSCUG00000005613
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSSAPGCALPAFPAAEEATAELDTQAMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYK
VPTPIQRKTIPVILNGKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGARALVLSPTRE
LALQTMKFTKELGKFTGLKTALVLGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLK
LQSVEYVVFDEADRLFEMGFAEQLQEIIARLPESHQTVLFSATLPKLLVEFARAGLTEPM
LIRLDVESKLSEQLKLAFFHVRGDNKPAVLLHLLRSVVKPQDQTVVFVATKHHTEYLKEL
LTAQGIHCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAARGLDIPMLDNVINYSFPA
KAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGRPLVLAGAQELPAEAGGVL
GRVPQSLVDDEECLLLTDHEGSLDLRSLRRVADNAHKQYVRSRPGPSPESIKRAKDLDVS
QLGIHPLFSARFEDTELERLKFVDSIKTYKSKATIFEINATARTLASTVMRSKRRRDHAL
IEKYQRGQQEKRAATLKGQGLCSALAASEEKAGEEEDLQDVFPTVVGGKRKRGEKGEDGA
RKKLQQPAQRDEDFYIPYRPKDFESERGLSVGGEGSAFEQQAAGAVLDLMGDENHNLNKS
KQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNNLYEKWKQKYKVDERDEEEEE
ERGGEQIRGKHKRGHRNRPPPAQGKVRSELKNKQQILKQRKAAAKQRFLQRGGLKRLKAR
NRQRVQELRQMAFGRRAGTTKKGKLRKRM
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcccccgggtgcgcgctgccggccttccccgctgccgaggaggccactgct
gagctggacacccaggccatggtacgggcccagaacaagaagaagaagaaatccggaggc
ttccagtccatgggcctgagctaccctgtcttcaaggggatcatgaagaagggctacaag
gtgcccacacccatccagaggaagaccatcccggtgatcctcaacggcaaggacgtggtg
gcgatggcacggacgggcagcgggaagacggcctgtttcctcatccccatgtttgagaag
ctgaaggcccacagtgcccagacgggggcccgagcccttgtcctctcgcccacccgcgag
ctggccctgcagaccatgaagttcaccaaggagttgggcaagttcacaggcttgaagaca
gcccttgtcctgggaggagacaagatggaggaccagtttgctgcgctgcacgagaacccc
gacataatcatcgccaccccggggcgcctgatgcacgtggcggtggaaatgaatctgaag
ctgcagagtgtggagtacgtggtgttcgacgaggccgacaggctgttcgagatgggcttt
gcagagcagctccaggagatcatcgctcggctccctgagagccatcagacggtcctcttc
tcggccacactgcctaagctgctcgtggagtttgctcgagctgggctcacggagccgatg
ctgatccgcctggatgtggagtccaagctcagcgagcagctcaagctggctttcttccac
gtacgtggggacaacaaaccggccgtgctgctccacctgctcaggagcgtggtgaagccc
caggaccagacggttgtctttgtggccaccaagcaccacacagagtatctcaaggagttg
ctgacggcccagggcatccactgcacacacatctacagctcactggaccaaaccgcccgc
aagatcaacatcgccaagttctcccagggcaagtgcccggtgctgctggttacagacgtg
gccgcccgtgggcttgacatccccatgctggacaatgtcatcaactacagcttccctgcc
aaggctaaactgttcctgcatcgcgttggtcgcgtggcccgagctggccggagcggcact
gcctactcactggtggctcccgatgagatgccgtacgtctttgacctgcacctcttcctg
ggacgcccactcgtcctcgctggtgctcaggagctgcccgctgaagccggtggggtcttg
ggccgcgtcccccagagcctggtggacgacgaggagtgcctgctgctcacggaccacgag
ggctccctggacctgcggagcctgcgccgtgtcgccgacaacgcccacaaacagtacgtg
cggtcccggcctggtccctcacccgagtccatcaagagggcaaaggacctggacgtgtcc
cagctgggcatccacccactcttcagtgctcgcttcgaagacaccgaactggagaggctg
aagttcgtggatagcattaaaacctacaagtcgaaggcgaccatcttcgagatcaacgca
acggcccggacattggccagcaccgtgatgcggtcgaagcggcgccgtgaccatgccctt
atcgagaagtaccagcgtgggcagcaggagaagcgggcagcaactctcaaagggcagggg
ctgtgctcagcccttgctgcatccgaggagaaggcaggagaggaggaagacctccaggac
gtgttccccaccgtggtgggcgggaagcggaaacggggcgagaagggagaagatggtgct
aggaaaaagctgcagcagccggcacagcgggacgaggatttctacatcccctatcggccc
aaggactttgagagcgagagggggctgagcgtgggcggcgagggcagtgccttcgagcag
caggcagccggagccgtcctggatctcatgggtgatgaaaaccacaacctcaacaagagc
aagcaactgctgaagtgggaccgcaagaagaagcggttcgtggggcaaacgggccaggag
gacaagaagaaagtgcggacagagagcgggcgctacatcagcagctcctacaagaacaac
ctctatgaaaagtggaagcagaaatataaggttgatgagcgggacgaggaagaggaagaa
gaaagagggggcgagcagatcagagggaagcacaaacgagggcacaggaaccggcctccc
ccagcccagggcaaggtgcgctcagagctgaagaacaagcagcaaatcttgaagcagcgc
aaagctgcggccaagcagcgcttcctgcaacgcggtggcctcaagcgcctgaaggccagg
aaccggcagcgggtgcaggagctgcggcagatggcttttgggcgccgggcaggcaccacc
aagaagggcaagctccggaagaggatgtag
DBGET
integrated database retrieval system
