Struthio camelus australis (South African ostrich): 104141883
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Entry
104141883 CDS
T08512
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104141883 (CLSTN1)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Cadherin related
104141883 (CLSTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
104141883
NCBI-ProteinID:
XP_009669760
Ensembl:
ENSSCUG00000007045
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MMKFVLKHQVPWRVLQQRTSLVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLR
FAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIMRSKEKLDCELQKDYTFTIQ
AYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKKYDNILKVEAVD
ADCSPQFSQICTYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAE
DVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPSMRLETCDEPVTSVQATVELETNH
IGKGCDRDTYSEKSIHRLCGASSGTAELLPPPSSAANWTIGLPTDNGHDSDQVFEFNGTQ
AVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYALYVHNCRLVF
LFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDGVSYDPFPVTEDYP
LHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGLMIRSGKLEN
KKVIDCLYTCKEGLDLQIADGVGKGMKIHMNPSRSTLTLEGDDIDRVDKAMQHISYLNSR
QFPTPGIRRLKITSVVKCFNEEACISIPSVEGYVMVLQPEEPKISLSGINHFARSASEFE
SSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDTCEVTVLGEELNQ
EQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIRYRNWHTVSLFDRKFK
LVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHTFVDLSGHNLANPH
PFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTIT
VNPMETYEDQHSSEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLE
WDDSTLSY
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttgttttgaaacaccaagttccttggagagtattgcagcagcgtacttct
ttggttaacaaacataagccgtggattgaaacaacgtatcatggcatagttacagaaaat
gacaacacagtactcttggacccccctttaatagccctggacaaagatgcacctctgcgt
tttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaaatt
cacgggcaaaatgtcccctttgaagcagtggtagtggataaatccactggtgagggaata
atgcgctctaaagaaaagcttgactgtgaactacagaaggactacacattcaccatacag
gcctatgactgtgggaagggaccagatggagcaaatgcaaaaaaatcccacaaagcaaca
gtacatattcaggtgaatgatgttaatgagtatgctcccgtgttcaaagagaagtcctac
aaggcaacagttattgaagggaagaagtatgacaacatcctgaaagtggaagcagtggat
gcagattgttcacctcagttcagccagatctgcacctatgaaattgtaactccggatgtt
ccttttgctattgataaagacggttatataaaaaacacagaaaagttaaactatggcaag
gagcatcagtataaactgacagtaactgcatatgactgtgggaagaagagagctgctgag
gatgtgttggttaaaatcagcattaagcctacatgcaagcctggctggcaaggttggagc
aaaagaatagagtatgagcctggtactggttctctagctctgtttcccagtatgcgtttg
gagacctgtgacgagccagtaacctccgttcaagcaacagttgaactagaaaccaaccac
attggcaaaggctgtgacagagacacctactctgagaaatccattcacagactctgtggt
gcttcttctggcacagctgagctacttccccctccaagtagtgctgctaactggacaata
ggacttcctactgataatggtcatgacagtgaccaagtctttgaatttaatggtacacaa
gctgtgaagattccagatggtgttgtcacagtcaatctgaaagagcccttcatgatttca
gtgtggatgaggcatgggcctggaaccaaagagaaagagacaattctgtgcaattcagac
aagacagatatgaaccggcaccactacgctctctatgtacacaattgccgacttgttttc
ctctttcgccaagatccttcagagggaaaaacatacaagcctgctgaatttcattggaaa
ctaaaccaagtgtgtgacaaagagtggcatcattatgtcctcaatgttgaatttccagca
gtaacgctttatgtagatggtgtttcatatgatcctttcccagtgactgaagattaccca
cttcatccttcaaagatagaaacgcagctagtagttggagcatgctggcaagaatataca
ggaaatgaaaatgacaatgaaactgtgcctgagacctctgcaggtggtgaactccacatg
gctcagtttttccgaggcaatctggcaggcttgatgattcgttctggtaaactggaaaac
aagaaggtgatagattgcctctatacttgcaaagagggactggatttacaaattgctgat
ggtgttggcaaaggcatgaagatccatatgaaccctagtcgatcaacactgaccttagag
ggagatgacattgacagagttgataaggccatgcaacacatttcctatttgaattctcgc
caattcccaacacctgggatccggagacttaaaattaccagcgttgtcaaatgtttcaat
gaggaggcctgcatctccattccttctgtggaggggtatgtaatggtcttgcagccagag
gaaccgaaaatcagcctgagtggcatcaaccactttgcccgctctgcttcggagtttgag
agctccgagggcgtttctctcttcccggagcttcgcataataagtaccatcacacgggag
gtggagccagaaggagatggagatgaggatcctacagtgcaagagtctttggtatctgaa
gagattatgcataacttggatacgtgtgaggtgacagtgctaggagaggaactaaatcag
gaacaagaaagcctggagattgacatgacacgattacagcagaaaggcattgaaatgagt
agttccaaccttggcatgatcatcacaggggttgatactatggccagttatgaggaggtt
ttgcatttgatacgctacaggaactggcacactgtttctctctttgacagaaagttcaaa
ttagtctgttctgaacttaatgggcgctatgtcagcaatgaatttaaagtggaggtgaat
gttatccacacagctaacccagtcgaacatgctaatcacatagctgcacaaccacagttt
gttcatccagtgcatcatacgtttgtcgatctctctggtcacaacttagctaaccctcat
ccgttttcagttgttccaagtacagccactgttgtgattgtggtttgtgtcagtttcctg
gtttttatgattattctgggagtgttccgaatccgagctgcacatcagagaacaatgcgt
gaccaagatactgggaaggaaaatgagatggactgggatgactctgccttgaccatcact
gtgaaccctatggagacctatgaggatcaacacagcagtgaagaggaggaggaagaggaa
gaagaaagtgaagatggagaagaagatgatatcactagtgcggagtctgaaagcagtgag
gaagaggaaggagagcaggaggaggaccaacagaatgtcaatagacagcaacagctggaa
tgggatgactctaccctcagttattga
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