Struthio camelus australis (South African ostrich): 104142012
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Entry
104142012 CDS
T08512
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scam03037
]
104142012 (NPHP4)
Cilium and associated proteins [BR:
scam03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104142012 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
104142012
NCBI-ProteinID:
XP_009669980
Ensembl:
ENSSCUG00000003983
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MSEWERVFVQNLAVPPPSQRRRGVPKESTAFQCVLKHIEGAFVKQRASEGWSDIEYQLRL
SLFDVTYHHFFGKTWKSSRRPLHSVPRQPTRVVFNETIYFHTSINHPSIIAVVEVVATAK
KQDGISQDLSCGFGIIHLFSSKSEPTNLATKDRGLKLYHGTPRALLQKNKHMTVMENSHL
QYTLRTHLPLETIFHLFPENLLMSGLQKIPGLLPAHGDTNDCFLKPRLMKSVTCYLDKLS
IHLYPSLEKFEEELLDLLNNDRLLKANSTPDGNTVTIQERRLHVGVHNGLCFVQAPQVAV
LVPEAEMVRGRSASFLGKQGSSSRASSVGQALVLRSRIHLTEMVRHPAFAIFFQLEYVFC
ASGGANGKALSATSLSKAAYMHSVRWAAWNPFLGSGSSEVVVPLRGGTQHNPSQVLVYKT
PPNSVTSEKVKQFESGTIQFHVSTDSGEHLVTSTDILSKDREDSEKPPTPSLSSASSLRM
MASSQGPGLSLSQLSASPQRRGEPALPRSASSPHPAPCGTLRSGHTEPPRGSGMGRITHL
EADLSSGFAGPDPGTSDQLRELPFMPLQVPIAAVGVQAGSSSTIVTRASLARLHASGFPE
ILDCNKEPVEIMDPTDPVNFSPQLEEADVLQSNEIILQFLAFSRVPQDGVEVTWPKTVFF
TFQFYRFPPVTTPRLQLVDMDNEKAARSAVSPRVLVQINKDGNLSSGSPGLQLKYMVDPA
FLKPGEQRWFICYLADHSLQIDVWDGDSLLLVGSTAVKLKHLLRQGRTAIRSHHELEVAA
TEYEQDVAVVGGDVLRHGAVRPVGVYVVVKGRLHLCLANVGHLCEETLQKSRSLPPSRSR
IVPSQDSASGFRGGSLFSLGTEVGKSYWSTAELSPSLVSPGCCKKSITMTDRTYVRQREA
QEEDGSGRKLYIMGCHEQRLQHSRDLQIIDTYRERIKAESISNMLRQAITTTHTVYAMLG
TAEFFEFALKNPYNVQHTVTIEIDHPELSIILDTREWRHFKELTKTVTPLEEDMFHLHDD
LRPQVYLRPKETVHIPFKYQTFSVDPTVIMQQGPVGLSVGEDAATSSLWKSGATLTKHIK
VSFQVSAGKPIAILQVKVEMQPHVVDQTFRFYHPELTFLKKAIRLPPWHTLPGAPAGMPA
GEPEMYVRCSDPNIICETKHMGPGEPQDVFLKVAGGPSPQIKKFFVAIYTDAWLAAPIQI
WQFYLHSLQRVDVSCITGQLTRLSLVLRGTQAIRKVKAYTSHPHELKVDPEGVFILPPNG
VQDLYIGVRPQKAGSRFIYLNLVDVEYHQLVSSWLLCVCCRQPLLSKAFEITLPAGGGKG
SNKRITYTNPYPSRRLYFLCTNRPDLLQFREDSFEIGGGEVYTIGLRFAPSQKAGEEEIL
IHINDHEDKNEETFCVKVIYQ
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatgggaaagggtttttgtgcaaaatctcgctgttcctccgccctcccagcgg
agacgcggtgtcccgaaggagtcgactgcttttcagtgtgtcctgaagcacatcgaaggg
gctttcgttaaacagagagcgtccgaaggctggtctgacattgagtaccagctccgcctg
tccctttttgatgtcacatatcaccacttctttgggaaaacatggaagagcagtaggagg
cctctccactctgtcccacgacagcccaccagagttgttttcaatgagaccatttacttc
catacctcgataaaccaccctagcatcattgctgtcgtggaagttgtggcaacagccaag
aaacaagatgggatctctcaggatctgtcgtgcgggtttggaatcattcatctgttcagc
agcaagtcagagccgacaaatttggctaccaaggacagaggactcaagctataccatggg
acacctcgtgccttactgcaaaagaacaagcacatgacagtgatggagaacagtcacttg
caatacaccttaaggacccacctgcccctggagacaatatttcacctctttcctgaaaac
cttctgatgtctgggctacagaaaattcctggcttgctgccggcacatggagacacaaat
gattgctttctgaaaccacggctcatgaaatcagtcacatgctatctggataaactctcc
atccatctgtatccttctctggagaaatttgaggaagaactgttggatttactaaacaat
gatcgtttactgaaggccaactccacaccagatggcaacacggtcaccattcaggaacga
cggctgcatgttggcgtccacaacggcttgtgctttgtccaggcgccgcaggtggctgtg
ttggtgccggaggctgagatggttcgggggcgctctgcaagcttccttgggaagcagggc
tccagctccagagcaagcagtgtaggtcaagctctggttctgaggagtcgcattcatttg
accgaaatggttcgtcacccagcgtttgcaatcttcttccagcttgagtatgtcttctgt
gcgtcggggggagccaacgggaaggccttgtccgccacatctctgagcaaggcagcctac
atgcactcagttcgatgggctgcttggaaccctttcctgggctctggttcctcagaggtg
gttgtgcccctgcgtggaggcactcagcacaatccaagccaagtcttggtatataagacc
cctccaaacagcgtgacctctgaaaaggtgaagcaatttgaatctggtactatccaattt
cacgtttctactgattcaggcgaacatcttgtgacttctacagacatcttaagtaaagac
agagaagattcagagaagcctcctacgccatctctgagttcagcatcttcacttcggatg
atggcctccagccagggaccagggttgtcactgtcgcagctgtcagcctccccgcagcgt
cgaggcgagcccgctctgccgcgcagcgccagctccccccatcctgcgccctgcgggaca
ctgcgaagtgggcacacagagccgcctcgtggcagcggcatgggcagaataactcacctg
gaagctgatctgagcagtggctttgcaggcccagaccctggcaccagcgaccagctgcgg
gagctgcccttcatgcccttgcaggtgccgatcgctgctgtgggggtgcaggcaggcagt
tctagcactatagtcactcgtgcctccctagctcgcttgcacgcctctggctttccagaa
atcctcgactgtaacaaggaaccagtggaaatcatggaccccacagaccctgtgaatttc
agtccccaactggaagaagctgatgttctgcaaagcaatgaaataatcctgcaatttctt
gcttttagtagggttccgcaggatggtgtagaagtaacatggccgaagacagtgttcttc
accttccagttctatcgttttccaccagtgaccacaccgcggctgcagttggtcgacatg
gacaatgagaaggcagcccggtcagctgtatctccgcgtgtccttgtccagattaacaaa
gatggaaacctcagcagtggatctccagggttgcagctgaagtatatggtggaccctgct
ttcctgaaacctggagaacagcgctggtttatatgttacctggctgaccatagtcttcag
attgacgtctgggatggagactctttgcttcttgttgggtcgactgcagttaaattgaag
cacctgctccgccagggtcggacagccatcaggagccaccatgagctggaggttgcagcg
actgaatatgagcaggacgtggcagtggtgggtggggacgttctcagacacggcgcggtg
cggcctgttggtgtctacgttgtcgtgaaagggcgacttcacctctgcctggccaatgtt
ggccacctgtgcgaggagacgctgcagaaatcgagatccttgcccccgtcccgctcccgc
attgtgccctcgcaggacagtgccagcggctttcgaggtggcagcttgttctccctgggc
acggaagtgggtaagtcctactggtccacggctgagctcagcccttcgcttgtctctcct
gggtgctgtaaaaaatcaatcacaatgacggatagaacatatgtgcggcagcgggaagcc
caggaggaggatggcagtgggaggaaactctacatcatgggctgtcatgagcagcgcctc
cagcactcccgggacctgcagattatcgacacctaccgggagcgcatcaaagccgagagc
atctccaacatgctccgccaggccatcaccacgacccacactgtgtacgccatgctgggc
acagcagagttctttgagtttgcactgaaaaacccctacaatgtccagcatacggtgacg
attgagattgaccacccagagctcagcattatattagacacaagggaatggaggcacttc
aaagagctgaccaagactgttactccattagaagaggatatgttccaccttcatgatgac
cttagacctcaggtctatctgcgccccaaagagaccgttcacatcccctttaaataccag
accttctcagtggaccccacagtcataatgcagcaggggcccgtggggctgagtgttggt
gaagatgctgccacctcctccctttggaaatctggtgccacactgacaaagcacatcaaa
gtctcttttcaagtgagtgccgggaagcccattgcaattctccaggtgaaggtggaaatg
cagccccacgttgtggaccagaccttccgattctaccacccagagctgacctttctgaag
aaggccatacggctgcccccatggcacactcttccaggtgcgccggcagggatgccagct
ggggaacccgagatgtatgttcgctgcagtgaccctaacatcatttgtgaaaccaaacat
atgggtcctggggaaccacaggacgtgttcttaaaagtagctggaggaccaagcccacag
atcaaaaaattctttgttgctatttatacggatgcctggcttgctgctcccatccagatc
tggcaattttaccttcactccctgcagcgtgtggatgttagctgcataacagggcagctg
acccgcctctccttggtgctcaggggcacccaagcgatcaggaaggtgaaggcatatacc
tcacatccccacgagctgaaggtggacccagaaggcgtatttattctccctccaaacgga
gtacaggacctgtacattggtgtgaggcctcagaaagctggcagcagatttatctacctc
aatctggtggatgtggaataccaccagctggtctcctcctggctcctctgtgtgtgttgc
aggcagcctctgctttctaaggcgttcgagataacgctccctgcaggaggaggaaaaggt
tccaacaaacggatcacgtacaccaacccgtatccctcccggaggctgtacttcctatgc
accaaccggcctgacctactgcaattcagggaggattcctttgagattggtggtggggag
gtgtacaccattggcttgcggtttgctccaagccagaaagcaggtgaagaggagattttg
attcatattaatgatcatgaagacaagaatgaggaaaccttttgtgtgaaggttatctac
cagtga
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integrated database retrieval system
