Struthio camelus australis (South African ostrich): 104142442
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Entry
104142442 CDS
T08512
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104142442 (COL17A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF2868
DUF4869
Pox_A_type_inc
DUF5006
Motif
Other DBs
NCBI-GeneID:
104142442
NCBI-ProteinID:
XP_009670662
Ensembl:
ENSSCUG00000009638
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MNSSSSSSGYRQTQSPSSTLTKSPGSTFERKTYVTRHATYEGSSSANSSPEFPRKEFASA
STRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPIPKKA
VVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSTAQSSSLINAMS
HSTGSVFGVPNNLAPSNPTLNTGLSTSSTVFGVQNNLSPSSATLAQNATAASTAYGLKNT
SQSNTMASTGVSASAGGTVLSSQGDDILHKDCKFLLLEKENVPAKKEMELLIMTKDSGKV
FSASTTGLNGGSFVEDTLKKEKQGFSSSYGADAGLKSEANGGLKSVPTRDKATYAEIHGG
DAGGAVGSAPSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRQLRSRVNDLE
RINDSYLTVNPASANIDKEVSKAEFVRGMPPSSAFSYGDEESVWLMVKSRLNKEIERGYF
RGERGEPGLKGDMGMQGLKGERGLPGVPGIPGPIGHQGPEGPKGQKGSMGDPGMEGPMGQ
RGREGLPGPRGEPGPPGFGEKGDRGVVGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPP
GLQGFRGEAGLPGAKGEKGAAGAPGPKGDQGEKGARGMTGEQGLRGMPGVPGEPGAKGSV
GPAGRDGQPGERGEPGLMGMPGARGPPGPTGDAGQPGLTGPQGPPGLPGNPGRPGAKGEP
GAPGKVISAEGSSTIALPGPPGPPGPPGPPGPPGVPGPVGPAGLPGQQGPRGEKGSAGEA
VIETIKTEVSSLTSQMLADLQGRAGPPGPPGPPGESVQGPPGPRGPPGEGLPGPPGPPGR
PGSFTPTSETFFTGPPGPPGPKGDQGEPGPRGFTGEPGEPGLPGISSHDGRVTMQGPPGV
PGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVT
DFLKSDNVRHYLTGAQGPPGPPGPPGVITMADGKNLDYAELAARVMSYMTGSSSRYHSFD
SSISTTSVLYQELLDMLQSSGMNIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPG
PVGPQGPPGIPGSPGTSLEDLSAYLQSVGYSSLSGIQGPPGPPGPPGPPGFSGTGLLSYA
DITHSDEFRSELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGLVAGSLAASYQESLA
SEKAHGGSLGAGGSSGGLLGTGSSYSSSMSRMSSYSASSTGSEGSYGSSMGGEGSYSTSR
GSDGSFDGLLAGEEAHRRSVGSSSAYSDSFTGSLDYNELALRVSESLQSRGILQDLMSYN
AQGPPGPPGPPGPPGISRVFASYGNVTEDLMDFFRTYGTIQGPPGEKGERGYPGPKGDPG
PMGPPGRQGHGDQKERKERKVSKCMLAEEEKEEVWVSKDRASSVFHWAAFLTAGTELA
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatcatcatcatcctccggctacagacaaacccagtctcccagctctactctc
accaaatcacctggctcaacatttgaacggaaaacctatgtcacccgccatgcaacatat
gaagggagctccagtgctaactcttctcccgagttccccaggaaagagtttgcatctgcc
tccacaagagggcgaagccaaagtcgagaaagtgaaatacgagtccgactgcagagcgcg
tcaccctctggcagatggacagagctggatgatgtgaaacgtttgttgaaaggaagtcga
tcagcaagctgcagccctactcgatcaccgtcaagtactctcccaataccaaaaaaagct
gtggtggagacaaaaatggttacggagagctctcaatcagtgtcagggacatatgataca
actatactgaatactgctctcccttcatatatgtggtcctctactctgcctgccgggtct
tcccttggtggataccacaacagcacggcccagagctcttctttgatcaacgctatgtct
cactctacaggatcagtctttggtgttccaaataacttggctcccagcaatcccactctg
aacacgggcctgagcacttcctcaacagtgtttggtgttcaaaacaacctatctccaagc
tctgcaactctggcccaaaatgccactgcagcctccacagcatatgggctgaagaacact
tcccagagcaacaccatggctagtactggcgtgtctgcctcagcaggaggaactgttttg
agctcccagggagatgacatcctgcacaaagactgcaagttcctgctgcttgagaaggag
aatgtcccagccaagaaggagatggagctcttgatcatgacaaaggacagtggcaaggtc
tttagtgcctctaccactgggctcaatggaggatcctttgtagaagacaccttgaagaaa
gagaagcagggattttcctcctcttatggtgcagatgctggcctaaaatcagaagcaaat
ggaggactaaaatctgtgccaacaagggacaaagcaacttatgcagaaatacatggtggt
gatgcagggggtgcagtgggatcagcaccatcctggtgcccctgtggttcctgctgtagc
tggtggaaatggctcctgggtttgcttctggcctggttgcttcttcttggattgctcttt
ggactcattgctctggcggaagaagtgagacagctgagatctcgtgtgaacgacctggaa
agaatcaatgacagctacctgacagttaacccagcaagtgcgaatatagacaaggaagtt
tcaaaagcagaatttgttcgtggcatgccaccctcttcagccttctcttatggagatgaa
gagtcagtttggctgatggtgaagagcagactgaacaaggaaatagaacgaggctacttc
cgaggagagagaggagaacctggtctgaaaggtgacatgggaatgcaagggctcaaagga
gagcgagggcttcctggagtcccaggcattcctggtccaattggacaccaaggaccagaa
ggaccaaaaggacagaaaggcagcatgggtgatcctggcatggaaggtcccatgggacag
agaggtcgagaagggctaccagggcctcgaggagaacctggaccacctggatttggagaa
aaaggagacagaggtgttgttggtgagccaggtcctccagggccacctggtccccctggt
tctgctggccttaaaggtctaatgggttctccaggcccgcagggtcctccaggtcctcct
ggcctacaaggatttagaggagaagcaggtcttccaggtgctaaaggtgagaaaggagct
gctggagcccctggaccaaaaggtgatcagggtgagaaaggtgctcgcggaatgacaggt
gaacaaggcttaagaggaatgcctggtgttccgggagagccaggggctaagggatcagta
ggaccagctggccgtgatgggcagccaggtgaaagaggtgagccaggtcttatgggaatg
ccaggagcccgaggcccaccaggacccaccggagatgcaggacagccaggtctcacagga
ccccaaggacccccagggcttccaggcaacccaggccgaccaggggctaaaggagaacct
ggagctccaggcaaagttataagtgctgagggttcatcaactattgctctgccaggccca
ccaggtcccccaggcccaccaggtcccccaggcccaccaggtgttccaggtcctgttggg
ccagctggtctccctggacagcaaggtccacggggtgagaagggatccgcaggtgaagct
gtgatagaaaccatcaaaacagaagtctcatcgttaacgtctcagatgctggcagattta
caagggcgagcaggaccaccaggtccccctggacctccaggtgaatctgtgcagggaccc
cctggacctcgtggccccccaggagaaggattgccaggacctccaggcccaccagggaga
ccaggatctttcacgccaacctcagaaacattcttcacaggcccaccaggcccaccaggc
ccaaagggagaccaaggcgaaccaggcccacgaggattcacaggtgaacccggtgagcct
ggcctcccaggaatctcctcacacgatggcagagtgaccatgcagggacctccaggagtt
ccaggcccaccaggccctccaggacccaaaggtgatgcaggtgtcccaggtgctcctggc
atcccaggagcatcgcgaggtggatccagacaaattcagggacccccaggacctcccggg
ccacctggtcctcctggcccaggtggaagctcatctcaagagattcagcagtatgtcact
gacttcctgaagagtgacaatgtaaggcattatttgactggtgcccaaggcccaccaggc
ccacccggcccacctggagtcatcactatggcagatggaaagaatttggactatgcggag
ctggctgcccgtgttatgagctacatgacaggctcttcaagtcgttatcattcatttgac
agttcgatatcaactacatccgttttgtaccaagaacttttggacatgctgcagagttct
gggatgaacattgggctccccggaccaccagggcctccagggacacctggcatatcttac
agtgacctaacagcatacctgcggaactctgaattcagtggccttgttggtccccctgga
cctgtagggccccagggacccccagggatccctggatcacccggcacctctctggaagac
ctctctgcttacctgcaaagtgtgggctactcctccctctctggaatccagggcccacct
ggccctcctggccctccaggaccaccaggcttctcgggaaccggactcctgtcctatgct
gacatcactcacagtgacgagttcaggagcgagctgatccagtacctgaagagtgatgaa
gttcgaagctacatctcggggccacctgggccccctgggccacggggaccaccaggacca
aaaggagatagtggtttggtggcagggtccctggctgcatcataccaagagtcactggct
tctgagaaggcacatggaggatcccttggtgctgggggatccagtgggggattgctgggc
acaggcagctcgtacagcagctccatgagcagaatgtcatcttacagcgcctcctccact
ggcagcgagggctcatatggttcctccatgggcggcgagggctcttacagcacctccagg
ggcagtgatgggtctttcgatgggctgctggcaggagaagaggcgcacaggagatcggtg
ggctcaagcagcgcctacagtgactccttcaccggatccctggattacaatgagctggca
ctccgtgtgtcggagagcctacagagccgaggtatccttcaagatctgatgtcttacaat
gcacagggacccccaggtcccccaggccctcctggtccccctggaatcagcagagttttt
gcatcctacggcaatgtaaccgaggacctcatggacttcttcagaacatatggtaccatc
caggggccacctggtgagaagggggagaggggttatcctggacccaaaggtgaccctgga
ccaatgggccctccaggacgccaagggcacggggaccaaaaggagagaaaggagagaaag
gtgagcaagtgtatgttggcagaagaagaaaaagaagaagtgtgggtgtctaaggacaga
gccagctcagtttttcactgggcagcgttcctgacagccggtacagaattagcctga
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integrated database retrieval system
