Struthio camelus australis (South African ostrich): 104142507
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Entry
104142507 CDS
T08512
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scam04515
]
104142507 (PCDH17)
Cell adhesion molecules [BR:
scam04515
]
Cadherins
Protocadherins
104142507 (PCDH17)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104142507
NCBI-ProteinID:
XP_009670781
Ensembl:
ENSSCUG00000003918
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MDLSYRKSAFVLRAVWLRLATVCTVIGTIGRDARLQPGAAGGGLLPPERGGGSGGRGPKS
TFRVLENSAPHLLDVDGESGLLYTKQRIDREALCQRSAKCQLSLEVFANDQEICMIKVEI
QDLNDNAPAFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLLTRDDYGLFSLD
VKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINVRLIDSNDNSPV
FEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVRDLFSIDPQSGL
IRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTIGFVSVRQGALS
EAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAIPFALEENYDNFYTVVTDRPLD
REAQDEYNVTIVARDGGSPPLNSTKSFSVRILDENDNPPRFSKSLYVLQVPENNIPGEYL
GSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTKHFEFR
VLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGVGYPVGTVRA
LDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVVKVSDHGKPS
LSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAAMITIAV
KCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKKKISKNDIMLVPSE
GEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHVGC
HTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGH
GDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQAFPTLLSFAILTLHTITSRL
QSVELLLPEQQGRGQRPIVGICGPARCEEGKFSEQEECVNCTDECRVLGHSDRCWMPQFP
AASQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYL
KAKRALSPLLQEVPSASSSPTKTCIEPCTSTKGPLDGCEVKSGALAEPSSQYLPTDSQYL
SPSKQSKDAPPFIASDQMARAFADVHSRVSRDSSEMDSVLEQLDRSTRDLGRESVDAEEV
VREIDKLLQDCRGSDPVAVRK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcttatcggaaatcggcgtttgttttgcgtgctgtctggctgaggctggcg
accgtctgcacggtcatcgggaccatcggccgtgatgcgcggctgcagccgggtgctgca
ggcggtgggctgctgcccccggagcgcggtggcggctccggcggccgcggccccaaatcc
accttccgggtgctggagaactcggccccacacctcctggacgtggacggcgagagtggg
ctgctctacaccaagcagcgcatagaccgtgaggcgctgtgccaacgcagcgccaagtgc
cagctgtcactcgaggtgttcgccaacgaccaggagatctgcatgatcaaggtggagatc
caggacctgaatgacaatgcaccggctttcccctccgaccaagtggacatggacatctcg
gaaaatgctgcaccaggcacccgcttccccctcactagcgcccacgatccagatgccggg
gacaatgggctgcgcacctacctgcttacccgcgatgactatggcctcttctccctcgat
gtgaagtcccgtggtgatggcacaaagtttccagagctggtgatccagaagcctttagac
cgtgaggagcagagccaccataccttggtactgacagcgctggatggtggtgacccacca
cgctccggcacggtgcagatcaatgtgcgcctcattgactccaatgataacagccccgtc
tttgaggctgcttcctatgtggtggagctgccagagaatgcaccactgggcactgctgtc
atcgacctcaatgccaccgatgccgatgagggcaccaacggggaggtgctctactcgttc
agcggctacgcgcctgaacgtgtccgtgacctcttcagcattgacccacagagcggcctc
atccgtgtcaagggcaacctggactatgaggaaagtggcctcattgagattgacgtccag
gctcgagacctggggcccaatcctatcccggcacactgcaaagttactgtccgcctcatc
gaccgcaatgacaatgcacccaccattggctttgtctctgttcgccagggagcactgagc
gaggccgccccaccaggcaccgtcatcgccctggtgcgggtcactgaccgtgactcaggc
aagaacgggcagctccagtgccgagtgctgggcggcggcggcgggcccggtgccatcccc
tttgccctggaggagaactatgacaacttttacactgtggtcacagatcggcctctggac
cgtgaggcacaggatgagtacaatgtgaccatcgtagcccgtgacgggggcagcccccca
ctcaactccaccaagtccttctctgtccgaatccttgatgagaatgacaacccaccccgc
ttcagtaagagcctttatgtcctgcaggtgcctgaaaacaacatccctggagagtacctg
ggctctgtcttggcccaggaccctgacctgggccaaaacgggacagtctcttactccatc
ctgcctgggcatgttggtgacgtctccatctacacctatgtctctgtcaatcccacaaat
ggtgctatctacgccctgaggagcttcaactatgagcagaccaagcactttgaatttcgt
gtgctggccaaggactcaggttcgccccaccgcgaaagcaatgccacggtacgcgtcact
gtgctagatgtcaatgacaacgcacctctcatcgtcctgcctgccctcatcaacgacact
gccgagctgcaggtgcctcgcaatgctggtgtgggctaccctgtgggcaccgtccgcgcc
ctggacagtgactttggggagagtgggcgcctcacatacgagattgtggaaggcaatgag
gagcacctctttgagatggacccaactagtggtgagatacgtaccttgcacccctactgg
gaggagctcagccctgtggctgaactggtggtaaaagtcagtgaccacggcaagcccagc
ctttctgcagtggccaagctcattgttagggccttggctgggcccctgcctgaggctggt
gagccgcaggtgaatggcgagcagcatcgacgaccacattgggacttgtcactgcccctg
attgtgaccctgagcactgtctccatcatcttactggctgccatgatcactattgccgtg
aaatgcaagcgagaaaacaaggagatccgcacctataattgtcgcattgccgagtatagc
caccctcagctgggaggagggggaggcagtggcgggggaggaggaggcagtggcagtgga
gggggcaagggcaagaagaagaagatcagcaagaatgacattatgctggtgcccagtgag
ggcgaggacagccggggccccctcaatgtcatgaacgtggtgagcagcccatccctggcc
acctcacccatgtactttgactaccagacccgcctgcccctcagctctcccaggtctgag
gtgatgtacctgaagcccgcctccaacaacctgactgtaccccagggacatgtgggctgc
cacaccagcttcacagggcaagggactaacgccagcgaggctcccccgagccggatgtcc
ataattcagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagttt
gttcaaagtagctccacgttcaaggatccagaaagagccagcttgagggacagcgggcat
ggggacagtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatg
tctgttagggaggcactcaagatgaaaactacttcaactaaaagccagccacttgaacaa
gcattcccgactttgctttcctttgctatcctcaccctacataccatcacaagtagactt
cagtctgttgagctgcttcttccagaacagcaaggcagaggccaaagacccatcgttggg
atctgtggaccagcccgctgcgaggagggaaaattttcagaacaagaagaatgtgttaac
tgcacagatgaatgcagagtgcttggtcattctgacaggtgttggatgccacagttccct
gcagccagccaggctgagaatgcagattatcgcacaaatctctttgtacccacagttgaa
gctaatgttgagactgagacttatgaaactgtgaatcccaccgggaaaaagacattttgt
acatttgggaaagacaagagagagcacactattctcattgccaatgttaaaccttactta
aaagccaaacgtgccctgagtcctctgcttcaggaggttccctcagcatcgagcagccca
accaagacgtgcattgagccttgcacctcaacaaaaggaccactggatggttgtgaagtg
aaatcaggagccttggctgaaccgagcagccagtacttgccaactgacagtcagtatcta
tcgcctagtaaacagtcaaaagacgctcctccgttcattgcatcagatcagatggctagg
gcctttgccgatgtacattcccgagtgagccgagactcgagtgagatggactctgttctg
gagcagttagaccgttcaacccgggatctaggcagggagtcggtggatgccgaggaagtt
gtgagagaaatcgacaagctcttacaggactgtcggggaagcgaccctgtggccgtgaga
aagtga
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