Struthio camelus australis (South African ostrich): 104142717
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Entry
104142717 CDS
T08512
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
scam04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104142717 (TNN)
04518 Integrin signaling
104142717 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104142717 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104142717 (TNN)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104142717 (TNN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_TEN
EGF_Teneurin
Fn3_PBP1
DUF4998
Pur_ac_phosph_N
Interfer-bind
Fn3_ROS1
EGF_2
Fn3_Dep-1_4th
Fn3_VIN3
Fn3_Dep-1_2nd
EGF_Tenascin
DUF7949
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
104142717
NCBI-ProteinID:
XP_009671140
Ensembl:
ENSSCUG00000004932
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MTIITMDHDAEFHLKTEDSSEVQLDPGEAEENEEQNIIFRHNIRVHTPKGNCETLDHVKG
LLERMEKLEKEVAELREVCSPQTCCRGSQGVSHCSSHGTFLYETCSCKCAEGWEGSDCSH
PTCPNHCSGHGLCDGGKCICDEPYFGEDCSQQLCPENCSGNGICDTAKGVCQCYEEFIGE
DCSEKRCPGDCSGNGFCDTGECYCHDGFFGLDCSQVLAPQNLQLLNSTEDSLAVSWDQMI
DVDNYLVSYYPVGYETLVKQVQVPKEQLSYEIVGLRPSTVYNVTLRHVKKGIASEPEFLE
ASTVPSALSDVWVMEEMENSLEVEWENPPTDVDYYKLKFRSLVEMDEKQVVVPKSNDPKS
RHIITGLKPGTEYKITVIPMKDDTEGKPSTVSGRTGIDSPTNLIAVRVTEDTATLSWNKV
QAPVDRYMVRYTSVDGDIKEIEVGNENSNFTLLDLKPGTEYVIHIWAEKGSQQSKKTSTR
AVTEIDSPTKLLTHRVTEDAIIVSWNKVQAPIDRYRVNYSSADGDTEEREVEKDRNVTTL
AGLKPGMEYVIYIWAEKGEQQSKRASTEAMTEIDSPAHLVTEQVTEDTATISWDRVQAVI
DRYMVNYTSADGDTEEIEVGKDKTATTLTGLKPGTEYAISLWAEKGAWQSKSTSTEAVTE
IDSPKNLVTDRVTEDTATISWDSIQAPIDRYVVNYTSADGDTKEVEVEKGESITTLTGLK
PGMKYVICLWAELGSKESKRVSTDALTEIDPPKNVRVSDVTQSAGVVTWTPPAAQIDGYT
LTYQGLGGSIKEVQLGPSDQRFVLEGLEQGVRYTVSVAAYREDRQSRKAGNTFSTVSFLY
PYPADCSQAQQNGNTSSGMYTIYLNGNGSRPIQVYCDMTTDGGGWIVFQRRSTGELDFYK
RWRDYVEGFGDPTGEFWLGLDKLHNLTSSSPIHYELRVDLRTSSESAYAVYDFFQVASSR
DRYRLSVGNYRGNAGDAMTYHHGWKFTTWDRDNDVALSNCALTHHGAWWYKNCHLANLNG
KYGESKHSEGVNWEPWKGHEFSIPFTEMKIRPQSSSNEPILGRRKRSLAGKKMIGA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgacaataatcacaatggaccatgatgctgagtttcacttgaaaactgaagacagcagc
gaggtgcagctggatcctggggaggccgaggaaaacgaagagcagaatatcatctttagg
cacaatatccgtgtgcacacccccaaagggaactgtgaaactctggaccacgttaagggc
ttgcttgagaggatggaaaagttggagaaagaagtggcggagctgagagaagtctgcagc
cctcaaacatgctgtaggggaagccaaggtgtctcacattgcagcagccatgggacattc
ctctatgagacttgtagctgtaagtgtgctgagggctgggaaggcagtgactgctcccac
cccacctgccccaaccactgcagcggccacgggctttgcgatggtggaaaatgcatctgc
gatgagccttacttcggtgaagactgcagccagcagctctgccccgagaactgcagcggc
aacgggatctgtgacacggccaaaggagtgtgccagtgctatgaggagttcatcggagag
gactgcagtgagaaacgatgtcctggggactgcagcggcaatgggttctgtgacacagga
gagtgctactgccatgatggcttcttcggtcttgactgctcccaggtgcttgctcctcag
aacctgcagctgctgaattccaccgaggactccttggcagtcagctgggatcaaatgatt
gatgtggataactacctcgttagctattatcctgtggggtatgagaccttggtgaaacaa
gtccaagtgcccaaagagcaactcagctatgagattgtgggtctccgtcccagcaccgtg
tacaacgtcacgcttcgtcatgtgaagaaggggattgccagtgagcctgagtttctagaa
gcgagtacagtcccgtctgcactcagtgacgtatgggtgatggaggagatggagaactcc
ctggaagtggagtgggagaacccccccacagatgtggattattacaagctgaaattcaga
tccctggtggagatggatgagaagcaggtcgtggtgcccaaaagcaatgaccccaagagc
agacacatcatcactggcctgaaacctggcactgagtacaagatcactgtcatacctatg
aaggatgatacagaggggaaaccatccacagtgagtggcaggactggaattgatagccca
accaatctgatagctgtccgagtgacagaggatacagccactctctcctggaataaagtt
caggctcccgtagacagatacatggtgcgatacacctcagtcgatggggatatcaaggaa
atagaggtggggaatgaaaacagcaacttcaccttactggatctgaaaccaggcacagaa
tatgtcatccacatctgggcagagaagggatcccagcagagcaagaagacaagcaccaga
gctgtgacagaaatagacagcccaactaagctgttaactcaccgagtgacagaagatgca
attattgtttcctggaacaaagtccaggctccaattgacagatacagagtgaactacagc
tcagctgatggggatacagaggagagagaggtggagaaagacaggaatgtcactaccttg
gcaggactgaagccaggcatggaatatgtcatttacatctgggcagaaaaaggagagcaa
cagagcaagagggccagcactgaggctatgacagaaatcgacagcccggctcacctggtc
actgagcaagtgacagaagatacagccaccatctcctgggacagggtccaggctgtcata
gacaggtacatggtgaactacacctctgctgatggtgacacagaagagatagaagtgggg
aaggacaagactgccactaccctgacaggactgaaacctggcactgaatatgccatctcc
ctctgggcagagaaaggagcctggcagagcaagagcaccagcactgaggcagtgacagaa
atagatagcccaaagaacctggtgactgaccgagtgacagaggatactgccaccatctcc
tgggatagcatccaagctcccatagacaggtatgtggtgaactacacttctgctgatggg
gacaccaaggaagtagaagtggagaagggcgagagcatcactacactgacaggactgaag
ccaggcatgaagtacgtcatctgcctctgggcagagctgggaagcaaggagagcaagagg
gtgagcactgacgcactgacagagattgatcctcccaagaacgtccgtgtatcagatgtg
actcagtctgctggtgtagttacttggactcctccagcagcacagattgatggctatact
ttgacctaccaggggctaggtggcagcatcaaggaagtgcagctgggacctagtgaccaa
aggtttgtgctggaaggactggagcaaggagtgaggtataccgtctctgtggcggcctat
agggaagatcgccagagcagaaaggcaggcaataccttctcaacagttagcttcctctac
ccatatccagcagactgcagccaggcacagcagaatggaaatacctccagcggcatgtac
accatttacctgaatggaaatggaagcagaccaatacaggtgtactgtgacatgaccact
gatggaggcggatggatagtgtttcagaggcggagcactggtgagctggatttctacaaa
cgctggagggattatgtggaaggctttggagatccaactggtgaattttggcttggtctt
gacaagctacacaatctcacaagcagcagccccatccattatgagctccgggtggatttg
cggacatccagtgaatccgcctatgctgtctatgacttcttccaggttgcctcaagcagg
gatagatacaggctgtcagtggggaattacagaggaaatgctggagatgcaatgacctat
caccatggctggaagttcacaacgtgggatagagacaatgatgtggctctcagcaactgt
gctctgacacaccatggtgcatggtggtacaagaactgccacttggccaacctcaatggg
aaatacggggagagcaagcacagtgagggggttaactgggagccatggaagggccatgaa
ttctccatccctttcactgagatgaagatccgtcctcaatcttctagtaatgagccaatc
ctggggaggaggaagaggtctctagcaggaaagaagatgatcggggcttaa
DBGET
integrated database retrieval system
