Struthio camelus australis (South African ostrich): 104142718
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Entry
104142718 CDS
T08512
Symbol
TNR
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-R
KO
K06252
tenascin
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04510
Focal adhesion
scam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104142718 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104142718 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scam00536
]
104142718 (TNR)
Glycosaminoglycan binding proteins [BR:
scam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104142718 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
Lzipper-MIP1
Colipase
Motif
Other DBs
NCBI-GeneID:
104142718
NCBI-ProteinID:
XP_009671141
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MGTDSESPVLRNMLISFNLLLLGTILKPFECRLEVTTEAAKRPVVDEEGSVANCSPPIKE
QPMVFHHIYNINIPLDSCCSSMLKSSAEEVSSEDDRMAEYAEQTSDSESQVTFTHRINFP
KQACKCSTSFPSMQDLLSRIEMLEREVSMLRDQCNSNCCQENAATDLATPQGLKFKTITE
TTAEVQWEPFSFPFDGWEISFIPKLGKARLASRCPHYVPLADHRPHVSPPVIDGPTQILV
RDVSDTVAFVEWTPPRAKVDAILXFFNGEGGKTPFRLQPPLSQYSLQALRPGSRYEVAVS
GLRGTNESDAALTHFTTEIDAPQNLRQGDSDYLEDGAMATCLLTKGEQGGQGAHGQAMAQ
PGTALTALSLSPLHLLADLVPGTEYGIGISAVMDSQQSVPATMNARTELDSPRDLLVTAS
TETSISLAWTKAKGPIDHYRVTFTPASGMASEVTVPQDRSQLTLSDLEPGTEYTISIIAE
RGRQQSLESTVDAFTGVRPITQLHFSHLTSSSVNITWSDPSPPADQLILYYNPRGKEKAQ
QLMLDGTRRHASLMGLQPATEYQVSLVAVHGTVSSEPITGSITTGIDAPKDLRAGNVTQD
SMVIYWTPPIAAFDHYRISYRAAEGRTDTTAIPRDATEYALHRLQPATEYEITAKSVRGR
EESELASLTAYTAMDAPLGVTATNITPTEALLQWNPPLSDVENYVIVLTRYTVAGETILV
DGVNQEYQLTNLLPSTTYTVTMYATNGPFASQTISTNFTTLLDPPTNLTASEVTRRSALL
SWMPPMGEIENYIMTYRSTDGSRKELIVDAEDTWIRLEGLSEMTEYTVRLQAAQNAMRSG
FTSTTFTTGGRVFANPQDCAQHLMNGDTLSGVYTISINGDLGQRVQVYCDMTTDGGGWIV
FQRRQNGLTDFFRKWADYRVGFGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYA
YYDKFSIGDSRSLYKLRIGDYNGTSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWW
YKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaagcccagtcctgaggaacatgcttatcagcttcaacttgcta
ctgctaggcaccatcctcaagccttttgagtgccggctagaagtgacaacagaggcagcc
aagaggccagtggtggatgaggagggcagcgttgccaactgcagcccacccatcaaagag
cagcccatggtcttccaccacatctacaacattaacatccccctggacagctgctgctcg
tcaatgctcaagtcttcagccgaggaggtgagttcggaagacgacaggatggcggagtat
gcagagcagacctcagacagcgagagccaggtcaccttcacccacaggataaacttcccc
aagcaggcctgcaagtgctccacctccttcccgtccatgcaggatctgctgagcaggatt
gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa
gaaaatgcagccacagacctcgccacgccgcaagggctgaagttcaagaccatcaccgag
acgactgccgaggtgcagtgggagcccttctccttccctttcgacggctgggagatcagc
ttcatccccaagcttggcaaggcccggctggccagccgctgccctcactacgtccccctt
gctgaccaccgcccgcatgtctctcctccagtaattgacggtccaacccagatcctggtg
cgggacgtctccgacaccgtggccttcgtggagtggacgccaccgcgcgccaaggtggat
gccatcctgnttttttttaacggggagggggggaagacccccttccgcctgcagcccccg
ctgagccagtactccctgcaggccctgcgcccgggctcccgctacgaggtggccgtcagc
ggcctgcgaggcaccaacgagagcgacgctgccctcacccacttcactacagagatcgac
gccccccagaacctgcgccagggagactctgactacttagaggacggagctatggcaaca
tgcttgctaacaaagggggagcagggaggccagggtgctcatggccaagcaatggcacag
ccaggcactgctctcactgccctctctctgtctcccttgcacctcctggcagatctggtg
ccaggaactgagtacggcattgggatatcggccgtcatggacagccagcagagtgtgcca
gctaccatgaacgccaggaccgagctcgacagcccccgggacctcctggtgacagcctcc
acagagacatccatctccctggcctggaccaaggccaaggggcccatcgaccactaccgc
gtcaccttcaccccggcctcagggatggcttccgaagtgacggtgccccaggacaggtca
cagctcaccctttcggacctggagcctgggacagagtacaccatctcaatcattgctgag
cggggacgccagcagagcctggagtccactgtggatgcattcacaggggtccggcccatc
acgcagctgcacttttcccacctgacgtcctccagcgtgaacatcacctggagcgatccg
tcaccaccagctgatcagctcatcttgtactacaacccacggggcaaagagaaggcacag
cagctcatgctagatggcaccaggagacacgccagcctgatggggctgcagccagccact
gagtaccaggtgtcactggtggctgtgcacggcacggtcagctcagagcccatcacgggc
tctataactacagggatcgatgctccaaaggacctcagggcaggcaacgtgacccaggac
tccatggtcatctactggacccctcccatcgctgcttttgaccactacagaatatcctac
agggctgccgaagggaggacggacaccaccgcgatccccagagatgctactgaatatgct
ctccaccgcctgcagcccgctaccgagtatgagatcactgcgaagagcgtgcggggccgg
gaggagagcgagctggcctcactcactgcatacacagccatggatgcccccttgggtgtc
actgccaccaacatcacccccaccgaggccttgctgcagtggaacccgccgctatcggat
gtggagaactacgtcatcgtcctcacccgctacacagttgcaggagaaacaattctggtg
gatggagtcaaccaggagtaccagctgaccaaccttctgcccagtaccacctacacggtc
accatgtatgccaccaatgggcctttcgccagccagaccatcagtaccaactttacaact
cttctggaccctccgacaaatctgaccgcaagcgaagtcactcgacggagcgcccttctg
tcctggatgcctccaatgggagagattgagaactacatcatgacctacagatcaactgat
ggaagccgtaaggagctgattgtggatgccgaagacacctggatccgcctggagggactt
tccgagatgacagagtacaccgtgcgcttgcaggctgcccaaaatgccatgcggagtggc
ttcacctccaccaccttcactacaggtggtcgtgtctttgctaatcctcaggactgcgcc
cagcacctgatgaacggcgacacgctgagcggggtctacaccatctccatcaacggtgac
cttggccagagggtgcaggtgtactgcgacatgaccacagacggaggcgggtggatcgta
ttccagaggcggcagaacgggctgacggatttctttcggaagtgggcagattaccgggtt
ggcttcggaaacttggaggatgaattctggctgggcttggacaacatccacaagatcacc
tcccaggggcgctacgagttgcgaatagacatgagagatggccaggaagcagcgtacgcc
tactacgacaagttctccatcggtgactccaggagtctgtacaagctccgaataggagac
tacaacggcacctctggggattccctcacctaccaccaaggccgccctttctccaccaag
gacagggacaacgatgtcgctgtgaccaactgcgccatgtcatacaaaggggcctggtgg
tacaagaactgccaccggaccaacctcaatggcaagtacggcgagtcccggcacagtcag
gggattaactggtaccattggaaaggccacgagttctccataccctttgtggaaatgaag
atgcgaccctacaaccaccgtaacatctctgggagaaagcgacggtccctacagctctga
DBGET
integrated database retrieval system
