Struthio camelus australis (South African ostrich): 104142795
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Entry
104142795 CDS
T08512
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104142795 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scam04040
]
104142795 (TRPV1)
Ion channels [BR:
scam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104142795 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
104142795
NCBI-ProteinID:
XP_009671258
Ensembl:
ENSSCUG00000005975
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MFSDGLLVMSSILGKVKKFGSSDIEESEVTDEHMDGEDSLLEMPDSLQGTLNTKVQPPKS
NIFARRGRFVMGDSDRDMAPMDSLYQMDHLMAPSVIKFHANLERGKFHKLLSTDSITGCS
EKAFKFYDRRRIFDAVAQGNTSDLDDLLIYLNRTLKHLTDDEFKEPETGKTCLLKAMLNL
HDGKNDTIPLLLDIAKKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLIQNGA
DVHARACGEFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGN
MVLHTLVEIADNTKDNTKFVTKMYNNLLILGAKINPILKLEELTNKKGLTPLTLAAKTGK
IGIFAYILRREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCVDTCEKNSVLEIIAYSSET
PNRHEMLLVEPLNRLLQDKWDRFVKHLFYFNFFVYAMHIIILTTAAYYRPVVKEKKPPFT
FGHSTGEYFRLTGEILSVLGGLYFFFRGIQYFVQRRPSFKTLIVDSYSEVLFFVHSLLLL
SSVVLYFCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVY
LVFLLGFSTAVVTLIEDDNEGQDTSSSDYTRCCHLKRGRTSYNSLYYTCLELFKFTIGMG
DLEFTENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITI
LDIENSYLNCLRRSFRSGKRVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGY
SGDLKRNPSYAIKAGRVSGKNWKTLVPLLRDGSRREEAQKLPEEVKLKPILEPYYEAEDS
EALKESLPKSV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagacggcctgctcgtcatgtcttccattcttgggaaggtgaagaagtttggc
agttctgacatagaggaatctgaagtgacagatgaacacatggatggggaggactccctg
ctggaaatgcctgacagcctccagggtactctcaacaccaaggtgcagccacccaaaagc
aacatctttgcaagacgtgggcggtttgtgatgggggatagtgacagggacatggcacct
atggactccttataccagatggatcatctgatggcaccttctgtcatcaaattccacgcc
aatttggagagggggaaatttcacaagctcctatctactgattccatcacaggctgctca
gaaaaagctttcaagttctacgaccgcagaaggatctttgatgctgtagcccaaggcaac
acaagtgatctggacgatctgctgatatatcttaataggaccttgaagcatctcacagat
gatgagttcaaagaaccagaaactgggaaaacatgcttattgaaagccatgctgaatctg
catgatgggaaaaatgacaccattccactgctgctggatattgcaaagaaaactggaact
ctgaaagagtttgttaacgcagagtatactgacaactactacaagggccagactgcactt
cacatcgctattgaacgaaggaacatgtacctagtgaagctcttgatccagaatggagca
gatgttcatgcaagagcctgtggggagtttttccggaaaatcaaagggaaacctggcttt
tatttcggggagctgcctctgtccctggctgcctgtaccaaccagctctgcattgtgaaa
tttctccttgagaacccctaccaggcagccaacatcactgctgaggattccatgggcaat
atggtcctgcacacactggtggagatcgcggataacactaaggataacaccaagtttgtt
accaagatgtacaataacttattgatccttggtgccaaaattaacccgatcttgaagcta
gaagaactcaccaacaagaaagggctgacaccgttaactctggcagccaaaacaggaaag
atagggattttcgcttacatcctcagacgagagatcaaagatcctgagtgcagacactta
tctaggaagttcactgaatgggcctatggacctgtccactcatctctttatgacctgtct
tgtgtagacacatgtgagaaaaattcagtgcttgagatcattgcctacagcagtgaaaca
ccaaaccggcatgagatgctgctggtggaacccctcaacaggctgctgcaagacaagtgg
gaccgctttgtcaaacatctattttacttcaacttctttgtctatgccatgcacatcatc
atcctcaccacagctgcctactacagacctgtggtgaaggagaaaaagcctcccttcacg
tttggtcacagcactggggaatattttcgactgactggagagatcctgagtgtactggga
ggtctctatttttttttcagagggatacagtatttcgtgcagagacgcccatcattcaag
acgctgatagttgacagctacagtgaggttcttttctttgttcactccctgctcctcctg
agctctgtggtcctgtacttctgtggccaggaactctacgtggcctccatggtcttctcc
ttggctctgggctgggctaacatgctgtactacacccgtggcttccagcagatgggcatt
tactctgtcatgattgcaaagatgatccttagagatttatgtcgcttcatgtttgtctac
ctagtattcctcttgggattttccacagctgtggtgactttaattgaagatgacaatgag
gggcaagataccagtagctctgactatacccggtgttgccatctgaaacgaggccgcaca
tcctataatagtctgtattatacctgcttggagcttttcaagttcactattgggatgggg
gacctggagttcactgagaactacaggttcaagtctgtatttgtcatccttttggttctc
tatgtcatccttacatacatcctcctgctcaacatgctcattgcactgatgggggaaact
gtgagcaaaattgcacaggagagcaagagcatctggaaactccagagagccatcacaatc
ttggatattgaaaacagctacttgaactgtttgaggcgctcgttccgatctgggaagcga
gtcttggtggggatcacacctgatggccaagatgattacagatggtgctttagagttgat
gaagtgaactggtccacgtggaatactaatctgggcataatcaacgaagaccctgggtac
tctggggacctcaaacgaaatcccagctacgctattaaggctggtcgagtttcagggaaa
aactggaaaacattggttccgcttttaagggatggaagcagaagagaagaggcacaaaaa
ctaccagaagaagtaaaattaaaacccattttggagccttactatgaggcagaagactcc
gaggcattgaaggagtcacttccaaagtcagtgtaa
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