Struthio camelus australis (South African ostrich): 104143048
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Entry
104143048 CDS
T08512
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104143048 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104143048 (DHX15)
03009 Ribosome biogenesis [BR:
scam03009
]
104143048 (DHX15)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104143048 (DHX15)
Spliceosome [BR:
scam03041
]
Complex A
U2 snRNP components
U2 related factors
104143048 (DHX15)
Complex B
104143048 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104143048 (DHX15)
Ribosome biogenesis [BR:
scam03009
]
Eukaryotic type
90S particles
Helicases
104143048 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
104143048
NCBI-ProteinID:
XP_009671610
Ensembl:
ENSSCUG00000006468
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQ
IPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA
KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVI
VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE
GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ
NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR
AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD
PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS
ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI
NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH
YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS
NFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacagtattaaccctttcacaaatctaccacatacacctcgatattatgac
atactgaagaaacggctacaactccctgtctgggaatataaagaaagatttacagatatt
ttgattaggcatcagtcatttgtactggttggagagactgggtctggtaaaacaacacag
attcctcaatggtgtgttgattacatgcgctcgttgcctggaccgaagaggggagtagca
tgtacccagcctaggagagtagctgcaatgagtgtggcacagcgagttgctgatgaaatg
gatgtaatgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgca
aaaactattttgaagtatatgactgatggtatgttacttcgtgaggcaatgaacgatcct
ttgctggagcgctatggtgtgataattcttgatgaggcccatgagagaacactggctact
gatattttgatgggagtgttgaaagaggttgtaagacagagagctgacttgaaggttata
gttatgagtgctactttagatgctggcaagtttcagatttattttgataactgtcctctc
ctaactatcccgggacgtacccatcctgtggagatattctatactccagaaccagaaagg
gactaccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaggaggaa
ggagatctcttactctttcttactggacaagaggaaattgatgaagcctgcaagaggata
aaacgcgaaattgatgatttgggccctgaagttggtgacatcaaaatcattccgttatat
tctacccttcctccacagcaacagcaaaggatttttgaacctcccccaccaaaaaaacaa
aatggagcaataggaagaaaggttgttgtgtccaccaacattgctgagacatcattaaca
atagatggtgttgtgtttgtgattgatcctggctttgcaaaacaaaaggtatacaatccc
cgtatcagagtggagtctctcttggtgactgcaattagcaaagcttcagctcagcagcga
gctggccgtgctggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggct
tacaaaactgaaatgcaggacaacacataccctgaaattctgagatctaacctgggatct
gtagtgttgcagctcaagaagcttggtatagacgatttagtgcacttcgattttatggac
ccaccagctcctgaaactctgatgagagccttagagcttttgaattatctagctgcttta
aatgatgatggagacctgactgagttgggatccatgatggctgaatttccgctggaccca
caactggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatct
attactgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaat
gtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgcagaagcacagactttaccagccgagactattacatcaatata
agaaaggcattagttactgggtatttcatgcaggtggcgcatttggagcgaacagggcat
tacttaacagtaaaggataaccaagtggtacagttgcatccttctactgttcttgatcat
aaaccagaatgggtgctttataatgagtttgtccttacaacaaagaactacattcggaca
tgtacagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagc
aattttccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtcc
aaggaatactcacaatactga
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integrated database retrieval system
