Struthio camelus australis (South African ostrich): 104143126
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Entry
104143126 CDS
T08512
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03030
DNA replication
scam03410
Base excision repair
scam03420
Nucleotide excision repair
scam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104143126 (RFC1)
03410 Base excision repair
104143126 (RFC1)
03420 Nucleotide excision repair
104143126 (RFC1)
03430 Mismatch repair
104143126 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scam03032
]
104143126 (RFC1)
03400 DNA repair and recombination proteins [BR:
scam03400
]
104143126 (RFC1)
DNA replication proteins [BR:
scam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104143126 (RFC1)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104143126 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_14
BRCT_2
AAA_5
Rad17
RuvB_N
AAA_18
AAA_17
AAA_16
AAA_33
RNA_helicase
AAA_7
nSTAND3
NTPase_1
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
104143126
NCBI-ProteinID:
XP_009671745
Ensembl:
ENSSCUG00000006668
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MAQQGAGREAVRAWGSSSSQAPAGSRTTWPLFPEHSLFASALKFETLKKNENLKNGEGTS
SGKKRGKETKVKNSPGEDDSKRKQTNKKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKL
GKVLKQDPVVYVSETDEDDDFVDKRLSLKPKENGTSAVSCLGTTTMKKEDVKLRAKSKPL
SPVKLTPISALDYFGTSSVQRSERKLVASKRKEPSQNRDCTLDDEAIARQLQLDEDSELE
RQLHEDEEFARTLAMLDETPKKKKARKDSEEEQTVLSTRSSPNVAERYKQTQKVKATSST
DEVKNYTVKEQTTYENSKGSRLPLQSSGGKIARELTDKTLPLKPGSKLVALKQKEESAEK
ERGARTVLSKEKNASGKEEKRTPKKQKTSPKKPESVSPEDSEKKRINYQAYRSFLNREGP
KALGSKEIPQGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMG
RDCGQSKCEKASTLGTKIIDEDGLFDLIRTMPGKKSKYELAAEKEAKKAESKHEKTPQKS
EAGRRKFSPLKREADNKKKNPTPDKGGTFKSVKKPTTAVQKLTDFKRQAVEKKETTKPEG
NLVSKMSEDGAEILLWVDKYKPTSLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDRQAKT
SKFGGKDDGTSFKAALLSGPPGVGKTTTASLVCEELGFSYVELNASDTRSKNSLKEVVAE
SLNNTSIRDFCSGTSSSVSGKHVLIMDEVDGMAGNEDRGGMQELIGLIRHTKIPIICMCN
DRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQ
ILHNLNMWCAKDKSLTYDEAKTDASKAKKDIKLGPFDVVRKVFAAGEEASHMSLIDKSDL
FFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRAADSICDGDLVDRQIRSKQNWNL
LPIQAIYSSVLPGELMRGYMSQFPVFPNWLGKFSSTGKHDRIIQELAVHMSLRTQTCKRT
VNMEYLSYLRDALVQPLQDFGTDGVQDTVAFMDSYCLMKEDVENIMEISTWGGNPSPFSK
LDPKVKAAFTRAYNKETHLTPYSLHTVKASKRQSGSMMTSDLNEDVNVEEIQSDEDEQDT
VESDAMIKQKKVKSSRLPKTEKNEETTKKEGKRKEKTRR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggtgcaggccgcgaggctgtccgagcgtggggttcctcctcttcccaa
gcaccagcgggcagtcggacaacttggcctctctttcctgaacacagcctgtttgcatct
gcccttaaatttgagactctgaaaaagaatgaaaacttaaaaaatggggaagggacctca
agtgggaagaaaaggggaaaggagactaaggtgaagaattcacccggtgaagatgattcc
aaacgaaagcaaacaaacaagaaaaaaagaataatctatgattcagattcagaagaggag
gtgcagtcagtgaaaaaatccaagaagccatctgagaaaaaagcagctacttcaaaactt
ggtaaagttctaaagcaggatcctgttgtttatgtttcagagacagatgaagatgatgac
tttgtcgataagagactttctctgaaacctaaggagaatgggacctcagcagtcagttgc
ctgggaacaactacaatgaaaaaggaggatgtgaaactgcgagctaaaagtaaacctcta
tctccagtgaagctgacccccatctcggcactcgattactttgggacaagtagtgtccag
cgatcagaaaggaagctggtagcaagtaaaaggaaggaaccctcacaaaacagagactgc
acgctagatgatgaggccattgccaggcaactgcagcttgatgaagattcagagctggag
agacagctgcatgaagatgaagaatttgctagaactttagccatgttggatgaaactcca
aagaaaaaaaaggctcggaaagattcagaagaagagcaaacagttttgagcaccaggagc
agtcctaatgtggcagaaagatataaacaaacgcaaaaagtgaaagcaactagctcaaca
gatgaagtgaagaattatactgtaaaggagcaaactacgtatgaaaactcgaaagggtct
cgtttgcctctccaatcatctggtggtaaaatagcaagagagttgacagataagaccctg
cctttgaagcctggctctaagcttgtggctctgaaacaaaaagaagagagtgctgagaag
gagagaggtgctcgaactgtgttatcaaaagaaaaaaatgcttcagggaaagaagagaag
agaacaccaaagaagcagaagacttcacccaaaaagcctgagtctgtaagtcctgaggac
tctgaaaagaagcgaataaattaccaggcctatcgaagcttcctaaatcgtgaaggtcca
aaagctctgggatcaaaagagatacctcaaggagccgaaaactgcttggaaggcctgacg
ttcgtaattacaggagttctggagtctattgaaagagatgaagccaagtctctgattgaa
cgttatggaggaaaagtaactggcaatgtcagcaagaagacaaactatctggttatggga
cgagactgtggccaatctaagtgtgagaaggcatcaactttagggacaaaaattattgat
gaggatggcctgtttgatcttattcgaactatgccaggcaaaaagtccaaatatgaactg
gcggctgaaaaagaggcaaaaaaagcagagtcaaaacatgaaaagacaccacagaaaagc
gaagctggaagaagaaaatttagtcctctcaaaagagaagctgataataaaaaaaagaat
cctactcctgataaaggaggtaccttcaaatctgttaagaaaccaaccactgctgtccag
aaacttacagactttaaacggcaagctgtagagaagaaagaaaccacaaagcctgagggg
aacttggtttccaagatgagtgaagatggagcagagatattgctatgggttgataaatac
aagcctacatctcttaaggcaataattggacagcagggtgagcaaagctgtgccaataaa
ctgcttcgatggcttcgaaactggcacaagaatacttctgaagacagacaagcaaagacc
agtaaatttggaggcaaagatgatggtaccagttttaaagcagcattactttccggtcca
ccaggagttggtaaaactactacagcttctttagtttgtgaggaactggggtttagctat
gtggagctgaatgccagtgatactcgcagtaagaacagtctaaaggaagtagttgctgaa
tcacttaacaacaccagcatcagagacttctgttctggcacctcctcatcagttagtgga
aaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagacagaggaggg
atgcaggagctgattggtttaatcagacacacaaagatacctatcatctgtatgtgtaat
gatcgaaaccatcctaagattcgttctttagtccactactgttttgatcttcgttttcag
agacctcgtctagaacagattaagggagccatgatgtctattgcatttaaagaaggctta
aagatcccaccacctgctatgcatgagataatcctagcggcaaatcaggacatcagacag
attttgcataatcttaatatgtggtgtgcaaaagataaatcattgacttatgatgaggcc
aaaactgatgccagcaaagccaaaaaggatatcaaactgggcccttttgatgttgtccga
aaggtttttgctgctggagaagaggcttctcatatgtctcttatagacaaatcagatctc
ttcttccatgattattccctagcacctctctttgttcaagagaactatgtacacgtgaaa
ccggctgctgctggagggaatctgaaaaagcacttagtgctattaagcagagcagctgat
agtatatgtgatggtgatctagtggacagacagattcgtagcaagcaaaactggaatctt
cttccaatacaggctatttattcaagtgttctgcctggggagctgatgagaggttacatg
tcccagtttcctgtatttcccaactggctggggaagttttcatccacaggcaaacatgat
cgcatcattcaagaactggcagtgcacatgagtctcagaacccagacatgcaagaggaca
gtaaatatggagtacttgtcctatttgcgggatgcacttgttcagcccttgcaagacttt
ggaacagatggcgtacaagatactgtagcgttcatggactcttactgcttgatgaaagaa
gatgttgaaaatatcatggaaataagtacctggggaggcaaccccagtcctttttctaag
ctggatcctaaggtcaaagcagcttttacacgagcctacaacaaagagacgcatctgact
ccgtattcactgcatactgtcaaggcatctaaaaggcagtcaggatccatgatgacttca
gacctgaatgaagatgtgaatgtggaagagatccaatctgatgaggatgagcaagatact
gttgaaagtgatgcaatgattaagcaaaaaaaagtaaagtcttccaggctgcccaaaaca
gagaaaaatgaagaaacaacaaaaaaagaaggaaaaagaaaagagaaaacaagacgttaa
DBGET
integrated database retrieval system
