Struthio camelus australis (South African ostrich): 104143301
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Entry
104143301 CDS
T08512
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104143301 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104143301 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scam04812
]
104143301 (VIM)
04147 Exosome [BR:
scam04147
]
104143301 (VIM)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104143301 (VIM)
Cytoskeleton proteins [BR:
scam04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
104143301 (VIM)
Exosome [BR:
scam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104143301 (VIM)
Exosomal proteins of other cancer cells
104143301 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1664
FKBP15
TolA_bind_tri
KIF21A_4th
ANG-1
DUF7491
DUF4200
DUF1759
BLOC1_2
LAMB4
Sec10_N
RBD-FIP
T2SSF
CLZ
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
104143301
NCBI-ProteinID:
XP_009672016
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MAPSAALRGQGPVEKMAPPALWDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQ
AQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNN
DALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQ
DEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFASLNLRET
NIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgccctccgcagccctcaggggtcagggtcctgtcgagaagatggcgcccccagcc
ctctgggatgttgacaatgcctccctggcacgtcttgatcttgagcgcaaagttgagtcc
ctgcaagaagagattgtgttcttgaagaagcttcatgatgaggaaatcagagaactgcaa
gcccaactccaggaacagcacatccaaattgatatggatgtttctaagcctgatcttact
gctgccctgcgtgacgttcgccaacagtatgaaagcgttgctgctaagaatcttcaggaa
gctgaagaatggtacaagtccaaatttgcagatctctctgaagctgctaataggaacaac
gatgccctgcgccaggccaaacaagaagctaatgaataccgcagacagattcaatctctt
acctgcgaagttgatgctcttaaaggaagcaatgaatccctggagcgccaaatgcgtgaa
atggaggagaattttgctgttgaagctgctaactaccaagacactattggccgtctacag
gatgagattcaaaacatgaaggaagaaatggctcgccatcttcgcgagtaccaggacctg
ctgaatgtaaagatggctcttgacattgagattgccacctacagaaaactgctggaggga
gaagagagcaggattaacatgcctattccaacctttgcttctctgaatctgagagaaacc
aacatcgagtctcagccaatggttgacactcactcaaagaggacacttctaattaagacc
gtcgaaactagagatggacaggttattaatgaaacttcccagcatcatgatgacttggag
taa
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