Struthio camelus australis (South African ostrich): 104143395
Help
Entry
104143395 CDS
T08512
Symbol
PMS1
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scam03400
]
104143395 (PMS1)
DNA repair and recombination proteins [BR:
scam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104143395 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_WDHD1
FlgH
Motif
Other DBs
NCBI-GeneID:
104143395
NCBI-ProteinID:
XP_009672159
Ensembl:
ENSSCUG00000010929
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MKQLPAETIRLLSSSQVITSVVSVVKELIENSLDASATSIDVKLENYGFDKVEVRDNGSG
IKVADVPVMAVKHYTSKISSSEDLESLTTYGFRGEALGSICCISEVLITTKTAVDDFSTQ
YVLDSSGHITSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTTKKCKEELKKIQDLLTAYG
IIKPDLRIIFTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCSEDPEIHLSGFL
PKAESDSSLTSLSSSERSFIFINNRPVHQKEILKLIRQYYSLVTPKDCTRLYPVFFLNVT
VPASAVDVNLTPDKTQVLLHYKESVLFAVENVLKSLYGPLPATASSETNKTDVTSEDMFV
HKTEQTDVVVNEMAPSGNNDLPTHTSFLSFSSDVQNCQAEKTTEICLNHQTFCGDNMHSR
LDKEEVAESDAFQDGSLKSVLCQEGQKVTDTVSSVPVGPRSENIDERLLRTDNINEIEKN
EEVSVPKDLLEVSADNWSMGNGFKNCIGDNLEPVKILIPDVGEAINKQNECAGEKSHNPQ
GPNPNIKKVSVLNDKSGQVMAYDLISNQIIRKPKSAIALFTQEYYSKLLTDNPKTSMEDI
LKMKIEEQWKNLNEEEKKNYEMRAAKDLERYNRQTRKAMEQTGHRAAKETERAQKPRLKA
SLSNQQKLDSMFHSQIEKKRKSDQPVKTVTVPFSLSSCKHTFPRHKRNDSDEHELCLIRR
QSFPDVWIFATEEKIMLLNPYRLEEALLHKRLLMNHKLPVEKLDKPIVLTDSLLGGSHYM
ATLCKMQKDYQRFNGSSYLSDPRLVANGFQIKVVQGASATENRLEIEGLANCLSYYGISD
LKEVLNAIANKNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQLG
KENKGCVHGRPFFHHLTDIPEVNKHKSKEIIQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgccagcagaaactattcgtctcctttcaagttctcaggtgattacatca
gttgtcagcgttgtaaaggagctgatagaaaattccttggatgccagtgccacaagtatt
gatgttaaactggagaactatgggtttgacaaagtagaagtgagagacaacggcagtgga
atcaaggttgctgatgttccagttatggcagttaaacactacacctcaaaaataagctct
tctgaggaccttgaaagcttgacaacatacggtttccgtggggaagccttgggatcaatt
tgttgcatatcagaggttttgatcacaaccaagacagctgttgatgacttcagcactcag
tatgttttggatagcagtgggcatataacttctcaaaagccttcccatcttgggcaaggt
acgacagtaacagtcctaaagttgtttaagaatcttcctgtaagaaaacagttttactca
acaactaaaaaatgtaaggaggagctgaaaaaaatccaagatcttctgacagcatatggc
atcataaaaccagacctgcggataatctttacacataataaggcagttatttggcaaaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctctgaagaccctgagatacatctttctggatttctc
ccaaaagctgagtcagacagttctttgacaagtctttcaagttcagaaaggagtttcatt
tttataaataatcgtccagtccatcagaaggaaatactgaagttaattcgacagtactac
agtctggtgacgcccaaggactgtactcgtttataccccgtcttctttttgaatgttact
gtacctgcctctgctgtggatgtgaatttaacacctgataaaactcaagttttactgcat
tataaggaatctgtcttatttgctgttgaaaatgtgttgaaatcactgtatgggccacta
cctgctacagcctccagcgaaactaataaaacagatgttacctcagaagacatgtttgtt
cataaaacagaacaaacagatgtggttgttaatgaaatggcgccatctggaaacaatgat
ctccccactcatacttcattcctttcattcagcagtgatgtgcaaaattgtcaagcagaa
aaaaccacagagatctgcttaaatcatcagacattttgtggtgataatatgcacagtcgc
cttgacaaagaagaggttgctgagagtgatgcctttcaagacggttccttaaaaagtgtg
ttgtgtcaggaggggcagaaggtgactgatactgtcagcagcgttccagtgggccctagg
tctgaaaatattgatgagcgtcttttgagaactgataacattaatgaaatagaaaaaaat
gaagaagtctcagtccctaaagacttactggaagtctctgctgataattggagtatggga
aatggatttaaaaactgtataggagacaacctggaacctgttaagattttgattcctgac
gttggagaagcaattaataagcaaaatgaatgtgctggtgaaaaaagccataacccccag
ggcccaaatccaaatataaagaaagtgagtgtgctaaatgataaatcaggacaagtaatg
gcttatgacttaattagtaatcaaataataaggaaaccaaagtctgcaatagcacttttc
acccaagaatattattcaaaattgttaactgataatccaaagaccagtatggaggacatc
ctgaaaatgaaaattgaggagcagtggaagaatttgaatgaagaggaaaaaaagaattat
gaaatgagagctgctaaagacctggaacggtacaacaggcagaccaggaaagccatggaa
cagaccgggcacagggcagcgaaggagacggagagggcacagaaacccaggctgaaggct
tctctgtccaaccagcagaagcttgacagcatgtttcattctcagattgaaaagaagcgg
aaatctgaccagcctgtgaaaactgtgacagtgcccttctctctgagttcctgtaaacat
acattcccgaggcacaagaggaatgattcagatgaacacgagctttgcctcatccgtcgg
cagagttttcctgatgtatggatatttgctactgaggaaaagataatgttactgaatcca
tatagactggaagaagccctgctacataaaagattactgatgaatcataaacttccagta
gagaaattggacaagccaattgtattaacagacagtcttcttggtggatctcactatatg
gctactctatgtaaaatgcagaaggattaccagagattcaatggatcaagttatttgtca
gatccaaggcttgtagcaaatggatttcagataaaagtggtgcaaggtgcttcagctaca
gaaaatcgtctggaaatagaaggcctggctaattgtctgtcatattatggtatttctgat
ttgaaagaagttctgaatgcaatagctaataaaaatgcaaaggaagtatatgaatgtaga
cctctcaaagtgataaattacttggagggagaagcagtacgtttagctcggcagctgccc
ttacatttgtcaaaagaagatgttcaaaacacaatttacaggatgaagcaacagcttgga
aaggaaaataaaggctgtgttcatggtcgtcctttttttcatcacttaacagatattcca
gaagttaacaagcacaaatccaaggaaattattcagtaa
DBGET
integrated database retrieval system
