KEGG   Struthio camelus australis (South African ostrich): 104143570
Entry
104143570         CDS       T08512                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
scam  Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:scam00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:scam01009]
    104143570 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:scam04121]
    104143570 (TRIM42)
Protein phosphatases and associated proteins [BR:scam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104143570 (TRIM42)
Ubiquitin system [BR:scam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104143570 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box AbiGii_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C
Other DBs
NCBI-GeneID: 104143570
NCBI-ProteinID: XP_009672434
LinkDB
Position
Unknown
AA seq 734 aa
MIDEEGTLNSCPCCSNCCCCYLTCHSRSEGCCLCWRFLFTNERNCSCFPCPYAEDAPCQC
CHCSCAEHANCWWCCCSCSNDPDCKYYCCGGENSACQYYESRCCRNSVYKPHHSRALGTV
QSKDVLSRFRTRSDASVNTLERNVSGHAFRDQLACPVCKQLFLQPFMLPCNHCICEKCIT
KSKSNAEVTENFFIIICPVCSKAHCLPYTDKIQLRKNYLRAKLAKKYMRRHGFLKWRFDH
SERPVYCQTCRDRKRKATKKCRTCGINYCNECLHIYHTETGAQDHVFTRAYQEDHEQWRC
LLHCSSNLSEYCLDDHELICEFCKNSLHNDHDTIPLTAACSREAASLFDAIAKFKKVRQG
VDNDLMEVLLLKNNFKAYKDNKRKEIRNGFLKLRMVLHEREKEMVELLENIELKKQKDIS
EYLNYTSSQLSYMDGLIQYSKEALKEESQVVFLQSAHCLVKEIEDAIASIFQPSPRLRED
PLKKLQLNFDELLINLRGLFPSPSRIKQSDGKAEKYPYPCNSDIVVPRHIPSTHEFKQVS
LFRSPSLNSLFDSGLVTKEALGRPSSTPPHRPKPRNEMCAYWDAACETPRKERKYQNVSF
PSPELTDNESVTAPGFVVIYQTVVYPRSAKIYWTCPTEDVDFFEVEFYEVVPTGPDNIVQ
TQLAGQLSKIKQQNLEIQHLEPNTEYLFKVRAVNTSGPGEWSDICKIITPDEHGKIQGRW
GIRRSIQGALHTDT
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgatagatgaagaaggtactctgaacagctgcccatgctgctcaaactgctgctgctgt
tacctgacttgccacagcagaagcgaaggatgctgtttgtgctggcgcttcttatttacc
aatgagcggaactgcagctgtttcccatgtccgtatgcagaagatgcaccctgccagtgt
tgccactgctcatgtgcagagcatgcaaattgctggtggtgctgctgctcttgttcaaat
gacccagactgtaaatactactgctgtggtggggagaactcagcgtgtcagtactacgaa
agcagatgctgcagaaactctgtctacaaaccacaccactcaagagcactagggactgtt
cagtcaaaagatgttttgtcaagatttagaaccagaagtgatgcatctgtcaatacactg
gaaaggaatgtctcaggccatgctttccgtgaccagcttgcctgtccagtgtgtaaacaa
ttgtttctccaaccatttatgctgccatgcaaccactgcatttgcgagaagtgtataact
aaaagcaagagcaatgctgaagtgactgaaaattttttcatcatcatatgcccagtgtgt
agcaaagcacattgcctcccctatactgataaaattcagctgaggaagaattacctgaga
gccaaactagccaagaaatacatgcgcagacatggctttctgaagtggagatttgaccat
agtgaaagaccggtctattgccaaacttgcagggacagaaaaagaaaggcaaccaaaaaa
tgcagaacatgtggaattaattactgtaatgaatgtctgcatatatatcatactgagact
ggtgctcaagatcacgtcttcaccagagcataccaagaagatcatgaacagtggcgctgc
ttattgcactgcagctcaaacctctctgaatactgtttggatgaccatgagctgatctgt
gagttctgcaagaactcactgcacaacgatcacgacactattcccctgacagcggcgtgt
tcaagagaggctgcttccctcttcgatgctattgcaaagtttaaaaaagtacgccaaggg
gttgataatgatctaatggaagttctcctgctaaaaaataacttcaaggcctacaaggac
aacaaaaggaaggagatcagaaacggattcttaaaattacgtatggttcttcatgaacga
gaaaaagagatggtggagttgcttgagaacattgaacttaaaaaacagaaggacatttca
gaatacctgaactatacatccagccagctctcatatatggatggccttattcagtactct
aaagaggctctgaaggaggaaagccaggttgtattcctgcaatctgcacactgcttggtg
aaagaaatagaagatgcaattgcttccattttccaacctagtccacgtctcagagaagat
cccttaaaaaaacttcaactcaactttgatgaacttttgatcaatttacgaggacttttc
ccatcccctagtagaataaagcagtcagatggtaaagcagaaaagtatccctatccttgt
aactcagacatagtggttccaaggcatattccaagcactcatgaattcaagcaagtatca
ctgttccgaagcccatctttaaattccttgtttgattcaggactggtgactaaagaagct
cttggaagaccaagctcaacacctccccatcgtcctaagccgcgtaatgaaatgtgcgcg
tactgggatgcagcttgtgaaactccaagaaaagaaagaaaatatcagaatgtttctttt
ccaagtccagaactgacagacaatgaatcagtcacagccccaggatttgttgttatctac
cagactgttgtatacccaaggtctgccaaaatttactggacctgtcccacagaagatgtg
gatttctttgaggtagaattttatgaagttgttcctactggtcctgataacattgtccag
acacaactagctggccagctgagcaaaataaagcaacagaaccttgagattcaacatctg
gagccaaatacagaatatctttttaaagtccgtgctgtcaatacaagcggtccaggtgaa
tggagtgacatctgtaagataatcactccagatgaacatgggaaaatccaaggcaggtgg
gggattcggaggagtattcagggtgctctgcatacagatacatag

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