Struthio camelus australis (South African ostrich): 104143571
Help
Entry
104143571 CDS
T08512
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scam04131
]
104143571 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scam04147
]
104143571 (COPB2)
Membrane trafficking [BR:
scam04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104143571 (COPB2)
Exosome [BR:
scam04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104143571 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
104143571
NCBI-ProteinID:
XP_009672435
Ensembl:
ENSSCUG00000012209
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MRFVWPAFVVFIAETPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHET
QTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIA
VHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRT
IKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE
GHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV
ALGYDEGSIIVKLGREEPAMSMDSNGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVK
DMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIR
ESNSVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPK
HIFWSDSGELVCIATEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKT
GLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYS
LLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFE
LALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATAS
GNANMVNKLAEGAEKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQV
SRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEYVKQSLADLRPAREYPL
VTPNEERNLLEEAKGFKPSGVMASQKQAEEPVLSLKPEAMNSVSQNSDLLSTKEQKTLLD
LEDDLDNLDLEDIDTTDINLDEEILDE
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgtctggcctgcttttgtagtgtttatcgcagaaacgcctctccgacttgat
ataaagcggaaactaactgctcggtctgaccgggtgaagagcgtagacttgcatcccaca
gagccatggatgttggctagcctttacaatggcagtgtctgcgtttggaatcatgaaaca
cagacgctggtgaagacctttgaagtgtgtgacctgccagtgagagctgccaaatttgtg
gcaagaaagaactgggttgttacaggagctgatgatatgcaaattagagttttcaattac
aacaccttggaaagagttcacatgtttgaagcacattcagattacattcgttgcattgct
gtacatcctacgcagcctttcatactgacaagcagcgatgacatgcttattaaactctgg
gactgggataagaagtggtcgtgttctcaggtgtttgaaggacatacccattatgtcatg
cagattgtcataaacccaaaagacaataatcagtttgccagtgcctctttggataggaca
atcaaggtgtggcagcttggctcttcttcacctaactttactttggaaggccatgaaaaa
ggagtaaactgcattgactattatagtggaggagacaagccatacctcatttcaggtgca
gacgaccgtttggttaagatctgggattaccagaataaaacatgtgtacagacactggag
ggacatgctcagaatgtgtcatgtgtcagctttcaccctgaattgcctatcataatcaca
ggctcagaagatggaaccgtgcgcatttggcattcaagcacataccgccttgaaagtacc
ctcaactatggcatggagagagtgtggtgtgtggccagtttaagaggatccaataatgtg
gcgttgggatatgatgaaggcagcattattgtcaagcttggtcgtgaagaacctgccatg
tccatggattcaaatggaaaaattatttgggctaagcattcagaagtccaacaggctaac
ttgaaagcaatgggagatgctgaaatcaaagacggagaaagattgccactggctgtaaag
gatatggggagctgtgaaatctatccacagacgattcagcacaaccctaatggacggttt
gtagtagtgtgtggtgatggtgaatacatcatttacacagctatggctttgagaaacaag
agttttggttctgcccaggagtttgtgtgggcacacgattcttccgaatatgcaatcagg
gagagcaacagcgttgtgaagatatttaaaaatttcaaagagaagaagtcattcaaacca
gactttggagcagaaggcatctatggaggcttcctgttgggtgtcagatctgttaatggt
ttggcattctatgattgggagaacacagaattgatacgcagaattgaaattcagcccaaa
catattttctggtctgactcgggtgagcttgtctgcattgctacagaagagtcattcttc
attctgaaatatctatcagaaaaagttgcagcagcccaagaaacacatgaaggagtcact
gaagatggaattgaagatgcttttgaggttcttggtgagattcaagagattgtgaaaaca
ggcttgtgggtaggtgactgctttatttacaccagttctgtgaacaggctcaactactat
gttggaggagaaattgtcactattgcccatttagacaggacaatgtatcttttggggtat
atccctaaggacaatcgactttatttgggtgataaagagctaaacattgttagctactct
ttgctggtctcagtgcttgaatatcaaactgctgtgatgagaagagacttcagtatggct
gacaaagttcttcccacaattccaaaagaacagagaaccagagttgcacattttcttgaa
aaacagggcttcaaacaacaagctcttgccgtatccacagatcccgagcatcgttttgaa
cttgctcttcaacttggagaattaaaaattgcatatcagcttgcagtggaagcagagtca
gaacagaaatggaagcaacttgctgagcttgccattagtaaatgccagtttggtttagcc
caggaatgtctccaccatgcacaagactatggaggtctattgctcttggctacagcttca
ggaaatgctaatatggtgaataagttagctgaaggagcagaaaaggatggcaagaacaac
gtagcgtttatgagctacttcttgcagggaaagcttgattcatgtttggaactgctgatt
aaaactgggcgtctcccagaagctgcttttcttgcacggacatatttgccaagccaggtt
tcaagggttgttaaactgtggcgggagaatctttctaaagtcaatcaaaaagctgctgaa
tcccttgctgatcctacagaatatgagaatcttttccctggcctaaaggaagcttttgtt
gttgaagaatatgtcaaacaaagtcttgctgacttgcggccagccagggaatatcccctt
gtcactccaaatgaagaaagaaatttacttgaagaagcaaaaggtttcaagccttctgga
gtaatggcatctcagaagcaggctgaagaaccagttctgtctcttaaaccagaagcgatg
aattcagtttcacagaattctgatctactttcaacaaaagaacaaaagacacttctggac
ttggaagatgacttagataacttggatcttgaggatattgataccacagatatcaatttg
gatgaagagatcttagatgagtga
DBGET
integrated database retrieval system
